RNA–Protein interactions for RNA: ENST00000538291.5

SCARB1-205, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 5,527 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-205ENST00000538291 ADCY8P40145 1251 aa18.42■□□□□ 0.54
SCARB1-205ENST00000538291 ODR4Q5SWX8 454 aa18.42■□□□□ 0.54
SCARB1-205ENST00000538291 LRCH2Q5VUJ6 765 aa18.42■□□□□ 0.54
SCARB1-205ENST00000538291 EXOC8Q8IYI6 725 aa18.42■□□□□ 0.54
SCARB1-205ENST00000538291 ZMYM4Q5VZL5 1548 aa18.42■□□□□ 0.54
SCARB1-205ENST00000538291 TRIM37O94972 964 aa18.42■□□□□ 0.54
SCARB1-205ENST00000538291 ADKP55263 362 aaKnown RBP18.42■□□□□ 0.54
SCARB1-205ENST00000538291 USP28Q96RU2 1077 aa18.42■□□□□ 0.54
SCARB1-205ENST00000538291 COPRSQ9NQ92 184 aa18.42■□□□□ 0.54
SCARB1-205ENST00000538291 BTBD18B2RXH4 712 aa18.42■□□□□ 0.54
SCARB1-205ENST00000538291 KCNK3O14649 394 aa18.42■□□□□ 0.54
SCARB1-205ENST00000538291 GBP1P32455 592 aa18.42■□□□□ 0.54
SCARB1-205ENST00000538291 ZNF445P59923 1031 aa18.42■□□□□ 0.54
SCARB1-205ENST00000538291 SEPT14Q6ZU15 432 aa18.42■□□□□ 0.54
SCARB1-205ENST00000538291 NME8Q8N427 588 aa18.42■□□□□ 0.54
SCARB1-205ENST00000538291 RETREG2Q8NC44 543 aa18.42■□□□□ 0.54
SCARB1-205ENST00000538291 SLC7A3Q8WY07 619 aa18.42■□□□□ 0.54
SCARB1-205ENST00000538291 APOL6Q9BWW8 343 aa18.42■□□□□ 0.54
SCARB1-205ENST00000538291 SEPT9Q9UHD8 586 aaPredicted RBP18.42■□□□□ 0.54
SCARB1-205ENST00000538291 DNMT1P26358 1616 aaKnown RBP18.42■□□□□ 0.54
SCARB1-205ENST00000538291 BLMP54132 1417 aaPredicted RBP18.42■□□□□ 0.54
SCARB1-205ENST00000538291 PIK3CAP42336 1068 aa18.42■□□□□ 0.54
SCARB1-205ENST00000538291 NSFP46459 744 aaKnown RBP18.42■□□□□ 0.54
SCARB1-205ENST00000538291 BPIFB4P59827 614 aa18.42■□□□□ 0.54
SCARB1-205ENST00000538291 CABS1Q96KC9 395 aa18.42■□□□□ 0.54
SCARB1-205ENST00000538291 MAGEF1Q9HAY2 307 aa18.42■□□□□ 0.54
SCARB1-205ENST00000538291 PPP4R1Q8TF05 950 aa18.42■□□□□ 0.54
SCARB1-205ENST00000538291 SLC39A2Q9NP94 309 aa18.42■□□□□ 0.54
SCARB1-205ENST00000538291 SEPT10Q9P0V9 454 aa18.42■□□□□ 0.54
SCARB1-205ENST00000538291 YEATS2Q9ULM3 1422 aa18.41■□□□□ 0.54
SCARB1-205ENST00000538291 GOLGA8CPA6NN73 597 aa18.41■□□□□ 0.54
SCARB1-205ENST00000538291 KRIT1O00522 736 aa18.41■□□□□ 0.54
SCARB1-205ENST00000538291 HNRNPDLO14979 420 aaKnown RBP18.41■□□□□ 0.54
SCARB1-205ENST00000538291 WDR46O15213 610 aaKnown RBP18.41■□□□□ 0.54
SCARB1-205ENST00000538291 TTLL1O95922 423 aa18.41■□□□□ 0.54
SCARB1-205ENST00000538291 PTPREP23469 700 aa18.41■□□□□ 0.54
SCARB1-205ENST00000538291 ARMC9Q7Z3E5 817 aa18.41■□□□□ 0.54
SCARB1-205ENST00000538291 SPICE1Q8N0Z3 855 aa18.41■□□□□ 0.54
SCARB1-205ENST00000538291 FAM170AA1A519 330 aa18.41■□□□□ 0.54
SCARB1-205ENST00000538291 BRD1O95696 1058 aa18.41■□□□□ 0.54
SCARB1-205ENST00000538291 POLR2FP61218 127 aaKnown RBP18.41■□□□□ 0.54
SCARB1-205ENST00000538291 SEPT6Q14141 434 aa18.41■□□□□ 0.54
SCARB1-205ENST00000538291 GPR108Q9NPR9 543 aa18.41■□□□□ 0.54
SCARB1-205ENST00000538291 BCAP29Q9UHQ4 241 aa18.41■□□□□ 0.54
SCARB1-205ENST00000538291 HYOU1Q9Y4L1 999 aa18.41■□□□□ 0.54
SCARB1-205ENST00000538291 ATP10DQ9P241 1426 aa18.41■□□□□ 0.54
SCARB1-205ENST00000538291 TMEM94Q12767 1356 aa18.41■□□□□ 0.54
SCARB1-205ENST00000538291 WDR17Q8IZU2 1322 aa18.41■□□□□ 0.54
SCARB1-205ENST00000538291 PLXNC1O60486 1568 aa18.41■□□□□ 0.54
SCARB1-205ENST00000538291 RGS16O15492 202 aaPredicted RBP18.41■□□□□ 0.54
SCARB1-205ENST00000538291 RPN1P04843 607 aaKnown RBP18.41■□□□□ 0.54
SCARB1-205ENST00000538291 H2AFZP0C0S5 128 aa18.41■□□□□ 0.54
SCARB1-205ENST00000538291 PCK1P35558 622 aa18.41■□□□□ 0.54
SCARB1-205ENST00000538291 C4orf50Q6ZRC1 276 aa18.41■□□□□ 0.54
SCARB1-205ENST00000538291 H2AFVQ71UI9 128 aa18.41■□□□□ 0.54
SCARB1-205ENST00000538291 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.41■□□□□ 0.54
SCARB1-205ENST00000538291 ZSWIM6Q9HCJ5 1215 aa18.41■□□□□ 0.54
SCARB1-205ENST00000538291 ASAP1Q9ULH1 1129 aa18.41■□□□□ 0.54
SCARB1-205ENST00000538291 TYW5A2RUC4 315 aaKnown RBP18.41■□□□□ 0.54
SCARB1-205ENST00000538291 RNF40O75150 1001 aa18.41■□□□□ 0.54
SCARB1-205ENST00000538291 MAP7D3Q8IWC1 876 aa18.41■□□□□ 0.54
SCARB1-205ENST00000538291 C10orf67Q8IYJ2 551 aa18.41■□□□□ 0.54
SCARB1-205ENST00000538291 AKT3Q9Y243 479 aa18.41■□□□□ 0.54
SCARB1-205ENST00000538291 STX2P32856 288 aa18.4■□□□□ 0.54
SCARB1-205ENST00000538291 PTK2Q05397 1052 aa18.4■□□□□ 0.54
SCARB1-205ENST00000538291 PTGDRQ13258 359 aa18.4■□□□□ 0.54
SCARB1-205ENST00000538291 KRBA2Q6ZNG9 492 aa18.4■□□□□ 0.54
SCARB1-205ENST00000538291 GJA10Q969M2 543 aa18.4■□□□□ 0.54
SCARB1-205ENST00000538291 SOS2Q07890 1332 aaPredicted RBP18.4■□□□□ 0.54
SCARB1-205ENST00000538291 TROVE2P10155 538 aaKnown RBP eCLIP18.4■□□□□ 0.54
SCARB1-205ENST00000538291 KANSL2Q9H9L4 492 aa18.4■□□□□ 0.54
SCARB1-205ENST00000538291 KIAA1024Q9UPX6 916 aa18.4■□□□□ 0.54
SCARB1-205ENST00000538291 LAD1O00515 517 aa18.4■□□□□ 0.54
SCARB1-205ENST00000538291 BBS5Q8N3I7 341 aa18.4■□□□□ 0.54
SCARB1-205ENST00000538291 ZNF577Q9BSK1 485 aa18.4■□□□□ 0.54
SCARB1-205ENST00000538291 DISC1Q9NRI5 854 aa18.4■□□□□ 0.54
SCARB1-205ENST00000538291 LRFN2Q9ULH4 789 aa18.4■□□□□ 0.54
SCARB1-205ENST00000538291 MLH3Q9UHC1 1453 aa18.4■□□□□ 0.54
SCARB1-205ENST00000538291 A6NJR5 290 aa18.4■□□□□ 0.54
SCARB1-205ENST00000538291 RINT1Q6NUQ1 792 aa18.4■□□□□ 0.54
SCARB1-205ENST00000538291 LMNTD2Q8IXW0 634 aa18.4■□□□□ 0.54
SCARB1-205ENST00000538291 NACC1Q96RE7 527 aa18.4■□□□□ 0.54
SCARB1-205ENST00000538291 ELF2Q15723 593 aa18.39■□□□□ 0.54
SCARB1-205ENST00000538291 PRKAG2Q9UGJ0 569 aa18.39■□□□□ 0.54
SCARB1-205ENST00000538291 ZBTB1Q9Y2K1 713 aa18.39■□□□□ 0.54
SCARB1-205ENST00000538291 ADCY9O60503 1353 aa18.39■□□□□ 0.54
SCARB1-205ENST00000538291 PZPP20742 1482 aa18.39■□□□□ 0.54
SCARB1-205ENST00000538291 IPO11Q9UI26 975 aaKnown RBP18.39■□□□□ 0.53
SCARB1-205ENST00000538291 BFSP1Q12934 665 aa18.39■□□□□ 0.53
SCARB1-205ENST00000538291 WHAMMP3Q1A5X7 153 aa18.39■□□□□ 0.53
SCARB1-205ENST00000538291 RSRC2Q7L4I2 434 aaKnown RBP18.39■□□□□ 0.53
SCARB1-205ENST00000538291 ANKRD42Q8N9B4 389 aa18.39■□□□□ 0.53
SCARB1-205ENST00000538291 NT5C1BQ96P26 610 aa18.39■□□□□ 0.53
SCARB1-205ENST00000538291 TPCN1Q9ULQ1 816 aa18.39■□□□□ 0.53
SCARB1-205ENST00000538291 PPFIA4O75335 1185 aa18.39■□□□□ 0.53
SCARB1-205ENST00000538291 MFAP3P55082 362 aa18.39■□□□□ 0.53
SCARB1-205ENST00000538291 MIS18BP1Q6P0N0 1132 aa18.39■□□□□ 0.53
SCARB1-205ENST00000538291 METTL23Q86XA0 190 aa18.39■□□□□ 0.53
SCARB1-205ENST00000538291 CDHR1Q96JP9 859 aa18.39■□□□□ 0.53
SCARB1-205ENST00000538291 CEP170Q5SW79 1584 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms