RNA–Protein interactions for RNA: ENST00000537634.1

CHD4-207, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 691 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-207ENST00000537634 RNPC3Q96LT9 517 aaKnown RBP11.42□□□□□ -0.58
CHD4-207ENST00000537634 YTHDC1Q96MU7 727 aaKnown RBP11.42□□□□□ -0.58
CHD4-207ENST00000537634 KATNBL1Q9H079 304 aa11.42□□□□□ -0.58
CHD4-207ENST00000537634 RWDD1Q9H446 243 aaPredicted RBP11.42□□□□□ -0.58
CHD4-207ENST00000537634 DNAH12Q6ZR08 3092 aa11.41□□□□□ -0.58
CHD4-207ENST00000537634 FRMPD2Q68DX3 1309 aaPredicted RBP11.41□□□□□ -0.58
CHD4-207ENST00000537634 LCTP09848 1927 aa11.41□□□□□ -0.58
CHD4-207ENST00000537634 ICAM1P05362 532 aa11.41□□□□□ -0.58
CHD4-207ENST00000537634 PCP11498 1178 aaKnown RBP11.41□□□□□ -0.58
CHD4-207ENST00000537634 SLC16A2P36021 539 aa11.41□□□□□ -0.58
CHD4-207ENST00000537634 HAND2P61296 217 aa11.41□□□□□ -0.58
CHD4-207ENST00000537634 IRX5P78411 483 aaPredicted RBP11.41□□□□□ -0.58
CHD4-207ENST00000537634 SMAD3P84022 425 aaKnown RBP11.41□□□□□ -0.58
CHD4-207ENST00000537634 MUM1L1Q5H9M0 696 aa11.41□□□□□ -0.58
CHD4-207ENST00000537634 SYDE2Q5VT97 1194 aa11.41□□□□□ -0.58
CHD4-207ENST00000537634 B4GALNT3Q6L9W6 998 aa11.41□□□□□ -0.58
CHD4-207ENST00000537634 MFSD6Q6ZSS7 791 aa11.41□□□□□ -0.58
CHD4-207ENST00000537634 TLK2Q86UE8 772 aa11.41□□□□□ -0.58
CHD4-207ENST00000537634 SMC5Q8IY18 1101 aa11.41□□□□□ -0.58
CHD4-207ENST00000537634 GUCD1Q96NT3 240 aa11.41□□□□□ -0.58
CHD4-207ENST00000537634 TMEM47Q9BQJ4 181 aa11.41□□□□□ -0.58
CHD4-207ENST00000537634 RANBP17Q9H2T7 1088 aaKnown RBP11.41□□□□□ -0.58
CHD4-207ENST00000537634 TCP11L1Q9NUJ3 509 aa11.41□□□□□ -0.58
CHD4-207ENST00000537634 CYP39A1Q9NYL5 469 aa11.41□□□□□ -0.58
CHD4-207ENST00000537634 LAMA4Q16363 1823 aa11.41□□□□□ -0.58
CHD4-207ENST00000537634 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.4□□□□□ -0.58
CHD4-207ENST00000537634 ARVCFO00192 962 aa11.4□□□□□ -0.58
CHD4-207ENST00000537634 DLL1O00548 723 aa11.4□□□□□ -0.58
CHD4-207ENST00000537634 TLR3O15455 904 aaKnown RBP11.4□□□□□ -0.58
CHD4-207ENST00000537634 EPHB4P54760 987 aa11.4□□□□□ -0.58
CHD4-207ENST00000537634 BEX3Q00994 111 aa11.4□□□□□ -0.58
CHD4-207ENST00000537634 AKNAD1Q5T1N1 836 aa11.4□□□□□ -0.58
CHD4-207ENST00000537634 TTBK2Q6IQ55 1244 aa11.4□□□□□ -0.58
CHD4-207ENST00000537634 BTNL9Q6UXG8 535 aa11.4□□□□□ -0.58
CHD4-207ENST00000537634 EEPD1Q7L9B9 569 aa11.4□□□□□ -0.58
CHD4-207ENST00000537634 CHD1LQ86WJ1 897 aa11.4□□□□□ -0.58
CHD4-207ENST00000537634 FBXO16Q8IX29 292 aaPredicted RBP11.4□□□□□ -0.58
CHD4-207ENST00000537634 AP5M1Q9H0R1 490 aa11.4□□□□□ -0.58
CHD4-207ENST00000537634 RNF41Q9H4P4 317 aaPredicted RBP11.4□□□□□ -0.58
CHD4-207ENST00000537634 GPCPD1Q9NPB8 672 aa11.4□□□□□ -0.58
CHD4-207ENST00000537634 ADD3Q9UEY8 706 aaKnown RBP11.4□□□□□ -0.58
CHD4-207ENST00000537634 TBX21Q9UL17 535 aa11.4□□□□□ -0.58
CHD4-207ENST00000537634 ASTN1O14525 1302 aa11.39□□□□□ -0.59
CHD4-207ENST00000537634 CTAGE5O15320 804 aa11.39□□□□□ -0.59
CHD4-207ENST00000537634 ZEB2O60315 1214 aa11.39□□□□□ -0.59
CHD4-207ENST00000537634 CABYRO75952 493 aa11.39□□□□□ -0.59
CHD4-207ENST00000537634 TIMP1P01033 207 aa11.39□□□□□ -0.59
CHD4-207ENST00000537634 PDHBP11177 359 aa11.39□□□□□ -0.59
CHD4-207ENST00000537634 SDSP20132 328 aa11.39□□□□□ -0.59
CHD4-207ENST00000537634 CDK7P50613 346 aa11.39□□□□□ -0.59
CHD4-207ENST00000537634 NKX3-2P78367 333 aa11.39□□□□□ -0.59
CHD4-207ENST00000537634 FSCN1Q16658 493 aaKnown RBP11.39□□□□□ -0.59
CHD4-207ENST00000537634 TBC1D10CQ8IV04 446 aa11.39□□□□□ -0.59
CHD4-207ENST00000537634 ESR2Q92731 530 aa11.39□□□□□ -0.59
CHD4-207ENST00000537634 TTC14Q96N46 770 aa11.39□□□□□ -0.59
CHD4-207ENST00000537634 VTA1Q9NP79 307 aa11.39□□□□□ -0.59
CHD4-207ENST00000537634 DIAPH3Q9NSV4 1193 aa11.39□□□□□ -0.59
CHD4-207ENST00000537634 PNMA2Q9UL42 364 aa11.39□□□□□ -0.59
CHD4-207ENST00000537634 GNEQ9Y223 722 aaKnown RBP11.39□□□□□ -0.59
CHD4-207ENST00000537634 DDX49Q9Y6V7 483 aaKnown RBP11.39□□□□□ -0.59
CHD4-207ENST00000537634 PTPDC1A2A3K4 754 aa11.38□□□□□ -0.59
CHD4-207ENST00000537634 NFIBO00712 420 aa11.38□□□□□ -0.59
CHD4-207ENST00000537634 ZNF213O14771 459 aa11.38□□□□□ -0.59
CHD4-207ENST00000537634 DYNC1LI2O43237 492 aaPredicted RBP11.38□□□□□ -0.59
CHD4-207ENST00000537634 SMPD1P17405 629 aa11.38□□□□□ -0.59
CHD4-207ENST00000537634 NUCB1Q02818 461 aa11.38□□□□□ -0.59
CHD4-207ENST00000537634 ZNF543Q08ER8 600 aa11.38□□□□□ -0.59
CHD4-207ENST00000537634 PPIGQ13427 754 aaKnown RBP eCLIP11.38□□□□□ -0.593e-7■□□□□ 9.1
CHD4-207ENST00000537634 BAATQ14032 418 aaPredicted RBP11.38□□□□□ -0.59
CHD4-207ENST00000537634 IQSEC1Q6DN90 963 aa11.38□□□□□ -0.59
CHD4-207ENST00000537634 MFSD5Q6N075 450 aa11.38□□□□□ -0.59
CHD4-207ENST00000537634 CXCL17Q6UXB2 119 aa11.38□□□□□ -0.59
CHD4-207ENST00000537634 PLEKHM2Q8IWE5 1019 aa11.38□□□□□ -0.59
CHD4-207ENST00000537634 FAM126BQ8IXS8 530 aa11.38□□□□□ -0.59
CHD4-207ENST00000537634 PURBQ96QR8 312 aaKnown RBP11.38□□□□□ -0.59
CHD4-207ENST00000537634 PPP1R12CQ9BZL4 782 aa11.38□□□□□ -0.59
CHD4-207ENST00000537634 SEMA6BQ9H3T3 888 aa11.38□□□□□ -0.59
CHD4-207ENST00000537634 PDGFCQ9NRA1 345 aa11.38□□□□□ -0.59
CHD4-207ENST00000537634 NEDD4P46934 1319 aa11.37□□□□□ -0.59
CHD4-207ENST00000537634 TMEM265A0A087WTH1 108 aa11.37□□□□□ -0.59
CHD4-207ENST00000537634 LOC102724159A0A0B4J2E5 919 aa11.37□□□□□ -0.59
CHD4-207ENST00000537634 HIP1O00291 1037 aa11.37□□□□□ -0.59
CHD4-207ENST00000537634 CALML3P27482 149 aa11.37□□□□□ -0.59
CHD4-207ENST00000537634 NT5C2P49902 561 aa11.37□□□□□ -0.59
CHD4-207ENST00000537634 ALDH5A1P51649 535 aaPredicted RBP11.37□□□□□ -0.59
CHD4-207ENST00000537634 PWP2Q15269 919 aaKnown RBP11.37□□□□□ -0.59
CHD4-207ENST00000537634 GPATCH4Q5T3I0 446 aaKnown RBP11.37□□□□□ -0.59
CHD4-207ENST00000537634 TAPT1Q6NXT6 567 aa11.37□□□□□ -0.59
CHD4-207ENST00000537634 CWC27Q6UX04 472 aaKnown RBP11.37□□□□□ -0.59
CHD4-207ENST00000537634 KIAA1211Q6ZU35 1233 aa11.37□□□□□ -0.59
CHD4-207ENST00000537634 TMEM199Q8N511 208 aa11.37□□□□□ -0.59
CHD4-207ENST00000537634 MORC4Q8TE76 937 aa11.37□□□□□ -0.59
CHD4-207ENST00000537634 MPHOSPH6Q99547 160 aaKnown RBP11.37□□□□□ -0.59
CHD4-207ENST00000537634 CDX2Q99626 313 aaPredicted RBP11.37□□□□□ -0.59
CHD4-207ENST00000537634 OSBPL3Q9H4L5 887 aa11.37□□□□□ -0.59
CHD4-207ENST00000537634 Q9Y3F1 56 aa11.37□□□□□ -0.59
CHD4-207ENST00000537634 WDR19Q8NEZ3 1342 aa11.36□□□□□ -0.59
CHD4-207ENST00000537634 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.36□□□□□ -0.59
CHD4-207ENST00000537634 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.36□□□□□ -0.59
CHD4-207ENST00000537634 IGHDP01880 384 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms