RNA–Protein interactions for RNA: ENST00000537582.1

SFSWAP-206, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 1,576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-206ENST00000537582 ZNF713Q8N859 430 aaPredicted RBP17.98■□□□□ 0.47
SFSWAP-206ENST00000537582 TBC1D5Q92609 795 aa17.98■□□□□ 0.47
SFSWAP-206ENST00000537582 PGBD1Q96JS3 809 aa17.98■□□□□ 0.47
SFSWAP-206ENST00000537582 PAGR1Q9BTK6 254 aa17.98■□□□□ 0.47
SFSWAP-206ENST00000537582 CTDP1Q9Y5B0 961 aaPredicted RBP17.98■□□□□ 0.47
SFSWAP-206ENST00000537582 ESYT2A0FGR8 921 aa17.97■□□□□ 0.47
SFSWAP-206ENST00000537582 TESPA1A2RU30 521 aaPredicted RBP17.97■□□□□ 0.47
SFSWAP-206ENST00000537582 ALAS1P13196 640 aa17.97■□□□□ 0.47
SFSWAP-206ENST00000537582 OSBPP22059 807 aa17.97■□□□□ 0.47
SFSWAP-206ENST00000537582 GNL2Q13823 731 aaKnown RBP17.97■□□□□ 0.47
SFSWAP-206ENST00000537582 PLS1Q14651 629 aa17.97■□□□□ 0.47
SFSWAP-206ENST00000537582 SAFBQ15424 915 aaKnown RBP eCLIP17.97■□□□□ 0.47
SFSWAP-206ENST00000537582 USP17L6PQ6QN14 398 aa17.97■□□□□ 0.47
SFSWAP-206ENST00000537582 LBX2Q6XYB7 198 aa17.97■□□□□ 0.47
SFSWAP-206ENST00000537582 DAGLBQ8NCG7 672 aa17.97■□□□□ 0.47
SFSWAP-206ENST00000537582 HHIPL1Q96JK4 782 aa17.97■□□□□ 0.47
SFSWAP-206ENST00000537582 FTOQ9C0B1 505 aaKnown RBP eCLIP17.97■□□□□ 0.47
SFSWAP-206ENST00000537582 R3HDMLQ9H3Y0 253 aa17.97■□□□□ 0.47
SFSWAP-206ENST00000537582 CREBZFQ9NS37 354 aa17.97■□□□□ 0.47
SFSWAP-206ENST00000537582 BIN2Q9UBW5 565 aaPredicted RBP17.97■□□□□ 0.47
SFSWAP-206ENST00000537582 PCDHA6Q9UN73 950 aa17.97■□□□□ 0.47
SFSWAP-206ENST00000537582 PCDHA8Q9Y5H6 950 aa17.97■□□□□ 0.47
SFSWAP-206ENST00000537582 NFIBO00712 420 aa17.96■□□□□ 0.47
SFSWAP-206ENST00000537582 AOC2O75106 756 aa17.96■□□□□ 0.47
SFSWAP-206ENST00000537582 CALML3P27482 149 aa17.96■□□□□ 0.47
SFSWAP-206ENST00000537582 DNM1Q05193 864 aaKnown RBP17.96■□□□□ 0.47
SFSWAP-206ENST00000537582 PABPC4Q13310 644 aaKnown RBP eCLIP17.96■□□□□ 0.47
SFSWAP-206ENST00000537582 SNRNP48Q6IEG0 339 aaKnown RBP17.96■□□□□ 0.47
SFSWAP-206ENST00000537582 NOSTRINQ8IVI9 506 aa17.96■□□□□ 0.47
SFSWAP-206ENST00000537582 RGS22Q8NE09 1264 aa17.96■□□□□ 0.47
SFSWAP-206ENST00000537582 CCDC12Q8WUD4 166 aaPredicted RBP17.96■□□□□ 0.47
SFSWAP-206ENST00000537582 CLEC4DQ8WXI8 215 aa17.96■□□□□ 0.47
SFSWAP-206ENST00000537582 CCDC102AQ96A19 550 aa17.96■□□□□ 0.47
SFSWAP-206ENST00000537582 FOXP1Q9H334 677 aaPredicted RBP17.96■□□□□ 0.47
SFSWAP-206ENST00000537582 PSTPIP2Q9H939 334 aa17.96■□□□□ 0.47
SFSWAP-206ENST00000537582 C6orf50Q9HD87 102 aa17.96■□□□□ 0.47
SFSWAP-206ENST00000537582 RIC8AQ9NPQ8 531 aa17.96■□□□□ 0.47
SFSWAP-206ENST00000537582 RBPJLQ9UBG7 517 aa17.96■□□□□ 0.47
SFSWAP-206ENST00000537582 MANSC4A6NHS7 340 aaPredicted RBP17.96■□□□□ 0.46
SFSWAP-206ENST00000537582 WNT7AO00755 349 aa17.96■□□□□ 0.46
SFSWAP-206ENST00000537582 PDIA4P13667 645 aaKnown RBP17.96■□□□□ 0.46
SFSWAP-206ENST00000537582 HOXA13P31271 388 aaPredicted RBP17.96■□□□□ 0.46
SFSWAP-206ENST00000537582 NBR1Q14596 966 aa17.96■□□□□ 0.46
SFSWAP-206ENST00000537582 JAKMIP3Q5VZ66 844 aa17.96■□□□□ 0.46
SFSWAP-206ENST00000537582 ABCB11O95342 1321 aa17.95■□□□□ 0.46
SFSWAP-206ENST00000537582 RASSF10A6NK89 507 aa17.95■□□□□ 0.46
SFSWAP-206ENST00000537582 MEIS2O14770 477 aa17.95■□□□□ 0.46
SFSWAP-206ENST00000537582 FDX1P10109 184 aa17.95■□□□□ 0.46
SFSWAP-206ENST00000537582 PIK3AP1Q6ZUJ8 805 aa17.95■□□□□ 0.46
SFSWAP-206ENST00000537582 CUL5Q93034 780 aa17.95■□□□□ 0.46
SFSWAP-206ENST00000537582 ZSCAN16Q9H4T2 348 aaPredicted RBP17.95■□□□□ 0.46
SFSWAP-206ENST00000537582 BRMS1Q9HCU9 246 aa17.95■□□□□ 0.46
SFSWAP-206ENST00000537582 TFIP11Q9UBB9 837 aaKnown RBP17.95■□□□□ 0.46
SFSWAP-206ENST00000537582 SLC45A1Q9Y2W3 748 aa17.95■□□□□ 0.46
SFSWAP-206ENST00000537582 ATP2A1O14983 1001 aa17.94■□□□□ 0.46
SFSWAP-206ENST00000537582 BAG4O95429 457 aaKnown RBP17.94■□□□□ 0.46
SFSWAP-206ENST00000537582 GNA11P29992 359 aa17.94■□□□□ 0.46
SFSWAP-206ENST00000537582 STAT3P40763 770 aa17.94■□□□□ 0.46
SFSWAP-206ENST00000537582 CLK2P49760 499 aaKnown RBP17.94■□□□□ 0.46
SFSWAP-206ENST00000537582 OAZ1P54368 228 aa17.94■□□□□ 0.46
SFSWAP-206ENST00000537582 DEFB115Q30KQ5 88 aa17.94■□□□□ 0.46
SFSWAP-206ENST00000537582 Q3C1V9 767 aa17.94■□□□□ 0.46
SFSWAP-206ENST00000537582 MYSM1Q5VVJ2 828 aa17.94■□□□□ 0.46
SFSWAP-206ENST00000537582 REXO1Q8N1G1 1221 aaKnown RBP17.94■□□□□ 0.46
SFSWAP-206ENST00000537582 CAPNS2Q96L46 248 aa17.94■□□□□ 0.46
SFSWAP-206ENST00000537582 TRERF1Q96PN7 1200 aa17.94■□□□□ 0.46
SFSWAP-206ENST00000537582 TEX13BQ9BXU2 312 aa17.94■□□□□ 0.46
SFSWAP-206ENST00000537582 RNF146Q9NTX7 359 aa17.94■□□□□ 0.46
SFSWAP-206ENST00000537582 PNMA3Q9UL41 463 aa17.94■□□□□ 0.46
SFSWAP-206ENST00000537582 CNPY2Q9Y2B0 182 aa17.94■□□□□ 0.46
SFSWAP-206ENST00000537582 MRPL11Q9Y3B7 192 aaKnown RBP17.94■□□□□ 0.46
SFSWAP-206ENST00000537582 CFBP00751 764 aa17.93■□□□□ 0.46
SFSWAP-206ENST00000537582 TOB1P50616 345 aaPredicted RBP17.93■□□□□ 0.46
SFSWAP-206ENST00000537582 GALNT17Q6IS24 598 aa17.93■□□□□ 0.46
SFSWAP-206ENST00000537582 BRAPQ7Z569 592 aa17.93■□□□□ 0.46
SFSWAP-206ENST00000537582 IFNL1Q8IU54 200 aa17.93■□□□□ 0.46
SFSWAP-206ENST00000537582 FAM177A1Q8N128 213 aaPredicted RBP17.93■□□□□ 0.46
SFSWAP-206ENST00000537582 SMCR8Q8TEV9 937 aaPredicted RBP17.93■□□□□ 0.46
SFSWAP-206ENST00000537582 SPATC1LQ9H0A9 340 aa17.93■□□□□ 0.46
SFSWAP-206ENST00000537582 GDPD2Q9HCC8 539 aa17.93■□□□□ 0.46
SFSWAP-206ENST00000537582 ATP2B1P20020 1258 aa17.92■□□□□ 0.46
SFSWAP-206ENST00000537582 MRPL12P52815 198 aaKnown RBP17.92■□□□□ 0.46
SFSWAP-206ENST00000537582 CEBPZQ03701 1054 aaKnown RBP17.92■□□□□ 0.46
SFSWAP-206ENST00000537582 ANKRD13CQ8N6S4 541 aa17.92■□□□□ 0.46
SFSWAP-206ENST00000537582 MB21D1Q8N884 522 aa17.92■□□□□ 0.46
SFSWAP-206ENST00000537582 MOV10L1Q9BXT6 1211 aaKnown RBP17.92■□□□□ 0.46
SFSWAP-206ENST00000537582 NCLP19338 710 aaKnown RBP17.91■□□□□ 0.46
SFSWAP-206ENST00000537582 SLC30A10Q6XR72 485 aa17.91■□□□□ 0.46
SFSWAP-206ENST00000537582 PURBQ96QR8 312 aaKnown RBP17.91■□□□□ 0.46
SFSWAP-206ENST00000537582 USP28Q96RU2 1077 aa17.91■□□□□ 0.46
SFSWAP-206ENST00000537582 COL20A1Q9P218 1284 aa17.91■□□□□ 0.46
SFSWAP-206ENST00000537582 CCDC194A0A1B0GVG4 234 aa17.91■□□□□ 0.46
SFSWAP-206ENST00000537582 EDIL3O43854 480 aa17.91■□□□□ 0.46
SFSWAP-206ENST00000537582 TRAF1Q13077 416 aa17.91■□□□□ 0.46
SFSWAP-206ENST00000537582 INF2Q27J81 1249 aa17.91■□□□□ 0.46
SFSWAP-206ENST00000537582 FCHSD1Q86WN1 690 aa17.91■□□□□ 0.46
SFSWAP-206ENST00000537582 RIOX2Q8IUF8 465 aa17.91■□□□□ 0.46
SFSWAP-206ENST00000537582 BICD2Q8TD16 824 aa17.91■□□□□ 0.46
SFSWAP-206ENST00000537582 PARK7Q99497 189 aaKnown RBP17.91■□□□□ 0.46
SFSWAP-206ENST00000537582 RABGAP1Q9Y3P9 1069 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms