RNA–Protein interactions for RNA: ENST00000537435.2

USP44-203, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-203ENST00000537435 MAP2K7O14733 419 aa16.05■□□□□ 0.16
USP44-203ENST00000537435 RHOXF2BP0C7M4 288 aa16.05■□□□□ 0.16
USP44-203ENST00000537435 DNM2P50570 870 aa16.05■□□□□ 0.16
USP44-203ENST00000537435 TUBB4BP68371 445 aa16.05■□□□□ 0.16
USP44-203ENST00000537435 PDE4DQ08499 809 aa16.05■□□□□ 0.16
USP44-203ENST00000537435 NONOQ15233 471 aaKnown RBP eCLIP16.05■□□□□ 0.16
USP44-203ENST00000537435 TSR1Q2NL82 804 aaKnown RBP16.05■□□□□ 0.16
USP44-203ENST00000537435 BEND6Q5SZJ8 279 aaPredicted RBP16.05■□□□□ 0.16
USP44-203ENST00000537435 WDR59Q6PJI9 974 aa16.05■□□□□ 0.16
USP44-203ENST00000537435 ZNF804AQ7Z570 1209 aa16.05■□□□□ 0.16
USP44-203ENST00000537435 NOC3LQ8WTT2 800 aaKnown RBP16.05■□□□□ 0.16
USP44-203ENST00000537435 EEF2KMTQ96G04 330 aa16.05■□□□□ 0.16
USP44-203ENST00000537435 EYA3Q99504 573 aa16.05■□□□□ 0.16
USP44-203ENST00000537435 RHOXF2Q9BQY4 288 aa16.05■□□□□ 0.16
USP44-203ENST00000537435 TUBGCP2Q9BSJ2 902 aa16.05■□□□□ 0.16
USP44-203ENST00000537435 MAGEF1Q9HAY2 307 aa16.05■□□□□ 0.16
USP44-203ENST00000537435 MYO6Q9UM54 1294 aa16.05■□□□□ 0.16
USP44-203ENST00000537435 SMCO2A6NFE2 343 aa16.05■□□□□ 0.16
USP44-203ENST00000537435 SRGNP10124 158 aa16.05■□□□□ 0.16
USP44-203ENST00000537435 BTDP43251 543 aa16.05■□□□□ 0.16
USP44-203ENST00000537435 CDK8P49336 464 aa16.05■□□□□ 0.16
USP44-203ENST00000537435 TAF3Q5VWG9 929 aa16.05■□□□□ 0.16
USP44-203ENST00000537435 TRIM9Q9C026 710 aa16.05■□□□□ 0.16
USP44-203ENST00000537435 HAUS4Q9H6D7 363 aa16.05■□□□□ 0.16
USP44-203ENST00000537435 ZNF287Q9HBT7 754 aa16.05■□□□□ 0.16
USP44-203ENST00000537435 EXOC1Q9NV70 894 aa16.05■□□□□ 0.16
USP44-203ENST00000537435 CCNE1P24864 410 aa16.04■□□□□ 0.16
USP44-203ENST00000537435 HERVK_113P62684 666 aa16.04■□□□□ 0.16
USP44-203ENST00000537435 NCAPH2Q6IBW4 605 aa16.04■□□□□ 0.16
USP44-203ENST00000537435 USP17L2Q6R6M4 530 aa16.04■□□□□ 0.16
USP44-203ENST00000537435 P2RX5Q93086 422 aa16.04■□□□□ 0.16
USP44-203ENST00000537435 CCDC47Q96A33 483 aaKnown RBP16.04■□□□□ 0.16
USP44-203ENST00000537435 CCNL1Q9UK58 526 aaPredicted RBP16.04■□□□□ 0.16
USP44-203ENST00000537435 TECP42680 631 aa16.04■□□□□ 0.16
USP44-203ENST00000537435 ASIC1P78348 528 aa16.04■□□□□ 0.16
USP44-203ENST00000537435 STK4Q13043 487 aa16.04■□□□□ 0.16
USP44-203ENST00000537435 C6orf50Q9HD87 102 aa16.04■□□□□ 0.16
USP44-203ENST00000537435 AGPAT5Q9NUQ2 364 aa16.04■□□□□ 0.16
USP44-203ENST00000537435 TFR2Q9UP52 801 aa16.04■□□□□ 0.16
USP44-203ENST00000537435 SNED1Q8TER0 1413 aa16.04■□□□□ 0.16
USP44-203ENST00000537435 BICDL2A1A5D9 508 aa16.03■□□□□ 0.16
USP44-203ENST00000537435 ERLIN1O75477 346 aa16.03■□□□□ 0.16
USP44-203ENST00000537435 GNA11P29992 359 aa16.03■□□□□ 0.16
USP44-203ENST00000537435 ST5P78524 1137 aa16.03■□□□□ 0.16
USP44-203ENST00000537435 ANKRD40Q6AI12 368 aa16.03■□□□□ 0.16
USP44-203ENST00000537435 C16orf86Q6ZW13 317 aa16.03■□□□□ 0.16
USP44-203ENST00000537435 NEK8Q86SG6 692 aa16.03■□□□□ 0.16
USP44-203ENST00000537435 RRP36Q96EU6 259 aaKnown RBP16.03■□□□□ 0.16
USP44-203ENST00000537435 C7orf25Q9BPX7 421 aa16.03■□□□□ 0.16
USP44-203ENST00000537435 VAT1LQ9HCJ6 419 aa16.03■□□□□ 0.16
USP44-203ENST00000537435 ABCB6Q9NP58 842 aa16.03■□□□□ 0.16
USP44-203ENST00000537435 H3BQF6 201 aa16.03■□□□□ 0.16
USP44-203ENST00000537435 FCER1AP12319 257 aa16.03■□□□□ 0.16
USP44-203ENST00000537435 TRIM21P19474 475 aaKnown RBP16.03■□□□□ 0.16
USP44-203ENST00000537435 KLK7P49862 253 aa16.03■□□□□ 0.16
USP44-203ENST00000537435 VSNL1P62760 191 aa16.03■□□□□ 0.16
USP44-203ENST00000537435 TBC1D8BQ0IIM8 1120 aa16.03■□□□□ 0.16
USP44-203ENST00000537435 MCM6Q14566 821 aa16.03■□□□□ 0.16
USP44-203ENST00000537435 MEA1Q16626 185 aa16.03■□□□□ 0.16
USP44-203ENST00000537435 SOGA3Q5TF21 947 aa16.03■□□□□ 0.16
USP44-203ENST00000537435 NOA1Q8NC60 698 aaKnown RBP16.03■□□□□ 0.16
USP44-203ENST00000537435 NEDD1Q8NHV4 660 aa16.03■□□□□ 0.16
USP44-203ENST00000537435 CNOT6LQ96LI5 555 aaKnown RBP16.03■□□□□ 0.16
USP44-203ENST00000537435 TTYH3Q9C0H2 523 aa16.03■□□□□ 0.16
USP44-203ENST00000537435 TNRC6CQ9HCJ0 1690 aaKnown RBP16.02■□□□□ 0.16
USP44-203ENST00000537435 RASSF10A6NK89 507 aa16.02■□□□□ 0.16
USP44-203ENST00000537435 PSMD14O00487 310 aa16.02■□□□□ 0.16
USP44-203ENST00000537435 ENC1O14682 589 aa16.02■□□□□ 0.16
USP44-203ENST00000537435 CCDC122Q5T0U0 273 aa16.02■□□□□ 0.16
USP44-203ENST00000537435 HDXQ7Z353 690 aa16.02■□□□□ 0.16
USP44-203ENST00000537435 TRAPPC11Q7Z392 1133 aa16.02■□□□□ 0.16
USP44-203ENST00000537435 TEX11Q8IYF3 940 aa16.02■□□□□ 0.16
USP44-203ENST00000537435 TBCKQ8TEA7 893 aa16.02■□□□□ 0.16
USP44-203ENST00000537435 SEC63Q9UGP8 760 aaKnown RBP16.02■□□□□ 0.16
USP44-203ENST00000537435 MTIF2P46199 727 aaKnown RBP16.02■□□□□ 0.15
USP44-203ENST00000537435 KRT83P78385 493 aa16.02■□□□□ 0.15
USP44-203ENST00000537435 PIGSQ96S52 555 aa16.02■□□□□ 0.15
USP44-203ENST00000537435 MMTAG2Q9BU76 263 aaKnown RBP16.02■□□□□ 0.15
USP44-203ENST00000537435 NUP58Q9BVL2 599 aa16.02■□□□□ 0.15
USP44-203ENST00000537435 SUGCTQ9HAC7 445 aa16.02■□□□□ 0.15
USP44-203ENST00000537435 L1RE1Q9UN81 338 aa16.02■□□□□ 0.15
USP44-203ENST00000537435 NAV1Q8NEY1 1877 aa16.01■□□□□ 0.15
USP44-203ENST00000537435 KIAA1328Q86T90 577 aa16.01■□□□□ 0.15
USP44-203ENST00000537435 FAM114A1Q8IWE2 563 aa16.01■□□□□ 0.15
USP44-203ENST00000537435 CEP95Q96GE4 821 aa16.01■□□□□ 0.15
USP44-203ENST00000537435 CD209Q9NNX6 404 aa16.01■□□□□ 0.15
USP44-203ENST00000537435 HDAC6Q9UBN7 1215 aa16.01■□□□□ 0.15
USP44-203ENST00000537435 BIN2Q9UBW5 565 aaPredicted RBP16.01■□□□□ 0.15
USP44-203ENST00000537435 GPR75-ASB3A0A0A6YYF3 556 aa16.01■□□□□ 0.15
USP44-203ENST00000537435 RFC4P35249 363 aa16.01■□□□□ 0.15
USP44-203ENST00000537435 CYLC1P35663 651 aaPredicted RBP16.01■□□□□ 0.15
USP44-203ENST00000537435 GPSM2P81274 684 aa16.01■□□□□ 0.15
USP44-203ENST00000537435 AMPD3Q01432 767 aa16.01■□□□□ 0.15
USP44-203ENST00000537435 POTEDQ86YR6 584 aa16.01■□□□□ 0.15
USP44-203ENST00000537435 RETREG2Q8NC44 543 aa16.01■□□□□ 0.15
USP44-203ENST00000537435 NEK11Q8NG66 645 aa16.01■□□□□ 0.15
USP44-203ENST00000537435 HPS3Q969F9 1004 aa16.01■□□□□ 0.15
USP44-203ENST00000537435 PCMTD1Q96MG8 357 aaPredicted RBP16.01■□□□□ 0.15
USP44-203ENST00000537435 NOC4LQ9BVI4 516 aaKnown RBP16.01■□□□□ 0.15
USP44-203ENST00000537435 UBA5Q9GZZ9 404 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms