RNA–Protein interactions for RNA: ENST00000537429.5

HMGA2-208, Transcript of high mobility group AT-hook 2, human

TSL 1 (best)

Gene HMGA2, Length 1,527 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HMGA2-208	ENST00000537429	VPS54	Q9P1Q0	977 aa		27.95	■■■□□ 2.06
HMGA2-208	ENST00000537429	DAXX	Q9UER7	740 aa	Predicted RBP	27.95	■■■□□ 2.06
HMGA2-208	ENST00000537429	CPA4	Q9UI42	421 aa		27.95	■■■□□ 2.06
HMGA2-208	ENST00000537429	MOV10L1	Q9BXT6	1211 aa	Known RBP	27.94	■■■□□ 2.06
HMGA2-208	ENST00000537429	GJB4	Q9NTQ9	266 aa		27.94	■■■□□ 2.06
HMGA2-208	ENST00000537429	ABCB11	O95342	1321 aa		27.94	■■■□□ 2.06
HMGA2-208	ENST00000537429	TBC1D8	O95759	1140 aa		27.93	■■■□□ 2.06
HMGA2-208	ENST00000537429	ALAS1	P13196	640 aa		27.93	■■■□□ 2.06
HMGA2-208	ENST00000537429	CWC22	Q9HCG8	908 aa	Known RBP	27.93	■■■□□ 2.06
HMGA2-208	ENST00000537429	XBP1	P17861	261 aa		27.92	■■■□□ 2.06
HMGA2-208	ENST00000537429	NAPA	P54920	295 aa		27.92	■■■□□ 2.06
HMGA2-208	ENST00000537429	TKFC	Q3LXA3	575 aa		27.92	■■■□□ 2.06
HMGA2-208	ENST00000537429	PPP1R18	Q6NYC8	613 aa		27.92	■■■□□ 2.06
HMGA2-208	ENST00000537429	FAM177A1	Q8N128	213 aa	Predicted RBP	27.92	■■■□□ 2.06
HMGA2-208	ENST00000537429	R3HDML	Q9H3Y0	253 aa		27.92	■■■□□ 2.06
HMGA2-208	ENST00000537429	MRPL11	Q9Y3B7	192 aa	Known RBP	27.92	■■■□□ 2.06
HMGA2-208	ENST00000537429	SLC25A27	O95847	323 aa		27.92	■■■□□ 2.06
HMGA2-208	ENST00000537429	CCDC12	Q8WUD4	166 aa	Predicted RBP	27.92	■■■□□ 2.06
HMGA2-208	ENST00000537429	C8orf76	Q96K31	380 aa		27.92	■■■□□ 2.06
HMGA2-208	ENST00000537429	TRERF1	Q96PN7	1200 aa		27.92	■■■□□ 2.06
HMGA2-208	ENST00000537429	LARP1B	Q659C4	914 aa	Known RBP	27.91	■■■□□ 2.06
HMGA2-208	ENST00000537429	CCDC148	Q8NFR7	591 aa		27.91	■■■□□ 2.06
HMGA2-208	ENST00000537429	CLEC4D	Q8WXI8	215 aa		27.91	■■■□□ 2.06
HMGA2-208	ENST00000537429	RNF146	Q9NTX7	359 aa		27.91	■■■□□ 2.06
HMGA2-208	ENST00000537429	OPLAH	O14841	1288 aa		27.9	■■■□□ 2.06
HMGA2-208	ENST00000537429	COPB2	P35606	906 aa		27.9	■■■□□ 2.06
HMGA2-208	ENST00000537429	CCNA1	P78396	465 aa		27.9	■■■□□ 2.06
HMGA2-208	ENST00000537429	MUM1L1	Q5H9M0	696 aa		27.9	■■■□□ 2.06
HMGA2-208	ENST00000537429	SHCBP1	Q8NEM2	672 aa		27.9	■■■□□ 2.06
HMGA2-208	ENST00000537429	FBXO18	Q8NFZ0	1043 aa		27.9	■■■□□ 2.06
HMGA2-208	ENST00000537429	PHF20	Q9BVI0	1012 aa		27.9	■■■□□ 2.06
HMGA2-208	ENST00000537429	ZMYND12	Q9H0C1	365 aa		27.9	■■■□□ 2.06
HMGA2-208	ENST00000537429	HOMER2	Q9NSB8	354 aa		27.9	■■■□□ 2.06
HMGA2-208	ENST00000537429	ESYT2	A0FGR8	921 aa		27.89	■■■□□ 2.06
HMGA2-208	ENST00000537429	ERCC3	P19447	782 aa		27.89	■■■□□ 2.06
HMGA2-208	ENST00000537429	PDC	P20941	246 aa		27.89	■■■□□ 2.06
HMGA2-208	ENST00000537429	FOSB	P53539	338 aa		27.89	■■■□□ 2.06
HMGA2-208	ENST00000537429	CCAR1	Q8IX12	1150 aa	Known RBP	27.89	■■■□□ 2.06
HMGA2-208	ENST00000537429	CHST13	Q8NET6	341 aa		27.89	■■■□□ 2.06
HMGA2-208	ENST00000537429	PORCN	Q9H237	461 aa		27.89	■■■□□ 2.06
HMGA2-208	ENST00000537429	SAGE1	Q9NXZ1	904 aa		27.89	■■■□□ 2.06
HMGA2-208	ENST00000537429	KCNJ14	Q9UNX9	436 aa		27.89	■■■□□ 2.06
HMGA2-208	ENST00000537429	SMCO2	A6NFE2	343 aa		27.88	■■■□□ 2.05
HMGA2-208	ENST00000537429	NLRP5	P59047	1200 aa		27.88	■■■□□ 2.05
HMGA2-208	ENST00000537429	TRIM29	Q14134	588 aa		27.88	■■■□□ 2.05
HMGA2-208	ENST00000537429	KRT40	Q6A162	431 aa		27.88	■■■□□ 2.05
HMGA2-208	ENST00000537429	NCAPG2	Q86XI2	1143 aa		27.88	■■■□□ 2.05
HMGA2-208	ENST00000537429	RGS22	Q8NE09	1264 aa		27.88	■■■□□ 2.05
HMGA2-208	ENST00000537429	NFIB	O00712	420 aa		27.87	■■■□□ 2.05
HMGA2-208	ENST00000537429	SYT1	P21579	422 aa		27.87	■■■□□ 2.05
HMGA2-208	ENST00000537429	MROH8	Q9H579	483 aa		27.87	■■■□□ 2.05
HMGA2-208	ENST00000537429	ACAD9	Q9H845	621 aa		27.87	■■■□□ 2.05
HMGA2-208	ENST00000537429	FBXO40	Q9UH90	709 aa		27.87	■■■□□ 2.05
HMGA2-208	ENST00000537429	GUCY1B3	Q02153	619 aa		27.87	■■■□□ 2.05
HMGA2-208	ENST00000537429	NPY5R	Q15761	445 aa		27.87	■■■□□ 2.05
HMGA2-208	ENST00000537429	WDR78	Q5VTH9	848 aa		27.87	■■■□□ 2.05
HMGA2-208	ENST00000537429	PSTPIP2	Q9H939	334 aa		27.87	■■■□□ 2.05
HMGA2-208	ENST00000537429	EFCC1	Q9HA90	598 aa		27.87	■■■□□ 2.05
HMGA2-208	ENST00000537429	C6orf50	Q9HD87	102 aa		27.87	■■■□□ 2.05
HMGA2-208	ENST00000537429	RIC8A	Q9NPQ8	531 aa		27.87	■■■□□ 2.05
HMGA2-208	ENST00000537429	MMP1	P03956	469 aa		27.86	■■■□□ 2.05
HMGA2-208	ENST00000537429	CALML3	P27482	149 aa		27.86	■■■□□ 2.05
HMGA2-208	ENST00000537429	GNA11	P29992	359 aa		27.86	■■■□□ 2.05
HMGA2-208	ENST00000537429	GALNT17	Q6IS24	598 aa		27.86	■■■□□ 2.05
HMGA2-208	ENST00000537429	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	27.86	■■■□□ 2.05
HMGA2-208	ENST00000537429	TBC1D5	Q92609	795 aa		27.86	■■■□□ 2.05
HMGA2-208	ENST00000537429	ECM2	O94769	699 aa	Predicted RBP	27.85	■■■□□ 2.05
HMGA2-208	ENST00000537429	GHRHR	Q02643	423 aa		27.85	■■■□□ 2.05
HMGA2-208	ENST00000537429	MCF2L2	Q86YR7	1114 aa		27.85	■■■□□ 2.05
HMGA2-208	ENST00000537429	CUL5	Q93034	780 aa		27.85	■■■□□ 2.05
HMGA2-208	ENST00000537429	MAF1	Q9H063	256 aa		27.85	■■■□□ 2.05
HMGA2-208	ENST00000537429	GLT8D2	Q9H1C3	349 aa		27.85	■■■□□ 2.05
HMGA2-208	ENST00000537429	WBP1L	Q9NX94	342 aa		27.85	■■■□□ 2.05
HMGA2-208	ENST00000537429	PCDHA4	Q9UN74	947 aa		27.85	■■■□□ 2.05
HMGA2-208	ENST00000537429	DDIT3	P35638	169 aa		27.84	■■■□□ 2.05
HMGA2-208	ENST00000537429	ADCY7	P51828	1080 aa		27.84	■■■□□ 2.05
HMGA2-208	ENST00000537429	MRPL12	P52815	198 aa	Known RBP	27.84	■■■□□ 2.05
HMGA2-208	ENST00000537429	TEX2	Q8IWB9	1127 aa		27.84	■■■□□ 2.05
HMGA2-208	ENST00000537429	DAGLB	Q8NCG7	672 aa		27.84	■■■□□ 2.05
HMGA2-208	ENST00000537429		H3BQV1	296 aa		27.83	■■■□□ 2.05
HMGA2-208	ENST00000537429	PIK3CD	O00329	1044 aa		27.83	■■■□□ 2.05
HMGA2-208	ENST00000537429	MEIS2	O14770	477 aa		27.83	■■■□□ 2.05
HMGA2-208	ENST00000537429	ADAMTS3	O15072	1205 aa		27.83	■■■□□ 2.05
HMGA2-208	ENST00000537429	MAPK4	P31152	587 aa		27.83	■■■□□ 2.05
HMGA2-208	ENST00000537429	IFFO2	Q5TF58	517 aa		27.83	■■■□□ 2.05
HMGA2-208	ENST00000537429	SAMD3	Q8N6K7	520 aa		27.83	■■■□□ 2.05
HMGA2-208	ENST00000537429	A1CF	Q9NQ94	594 aa	Known RBP	27.83	■■■□□ 2.05
HMGA2-208	ENST00000537429	MAP3K20	Q9NYL2	800 aa	Known RBP	27.83	■■■□□ 2.05
HMGA2-208	ENST00000537429	STX6	O43752	255 aa		27.82	■■■□□ 2.04
HMGA2-208	ENST00000537429	CFB	P00751	764 aa		27.82	■■■□□ 2.04
HMGA2-208	ENST00000537429	PDIA4	P13667	645 aa	Known RBP	27.82	■■■□□ 2.04
HMGA2-208	ENST00000537429	HSD17B4	P51659	736 aa		27.82	■■■□□ 2.04
HMGA2-208	ENST00000537429	BLID	Q8IZY5	108 aa		27.82	■■■□□ 2.04
HMGA2-208	ENST00000537429	BICD2	Q8TD16	824 aa		27.82	■■■□□ 2.04
HMGA2-208	ENST00000537429	TSKS	Q9UJT2	592 aa		27.82	■■■□□ 2.04
HMGA2-208	ENST00000537429	RBBP6	Q7Z6E9	1792 aa	Known RBP	27.82	■■■□□ 2.04
HMGA2-208	ENST00000537429	GCOM1	H8Y6P7	765 aa	Predicted RBP	27.82	■■■□□ 2.04
HMGA2-208	ENST00000537429	POLR2M	P0CAP2	368 aa		27.82	■■■□□ 2.04
HMGA2-208	ENST00000537429	CLK2	P49760	499 aa	Known RBP	27.82	■■■□□ 2.04
HMGA2-208	ENST00000537429	USP17L6P	Q6QN14	398 aa		27.82	■■■□□ 2.04

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