RNA–Protein interactions for RNA: ENST00000537162.5

CPSF7-217, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 801 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-217ENST00000537162 DNAJC25-GNG10A0A024R161 153 aa11.72□□□□□ -0.53
CPSF7-217ENST00000537162 TIMM10P62072 90 aa11.72□□□□□ -0.53
CPSF7-217ENST00000537162 HYAL1Q12794 435 aa11.72□□□□□ -0.53
CPSF7-217ENST00000537162 FSCN1Q16658 493 aaKnown RBP11.72□□□□□ -0.53
CPSF7-217ENST00000537162 PTPROQ16827 1216 aa11.72□□□□□ -0.53
CPSF7-217ENST00000537162 SPICE1Q8N0Z3 855 aa11.72□□□□□ -0.53
CPSF7-217ENST00000537162 PCGF6Q9BYE7 350 aa11.72□□□□□ -0.53
CPSF7-217ENST00000537162 FBXO28Q9NVF7 368 aa11.72□□□□□ -0.53
CPSF7-217ENST00000537162 RAI14Q9P0K7 980 aa11.72□□□□□ -0.53
CPSF7-217ENST00000537162 HMG20BQ9P0W2 317 aa11.72□□□□□ -0.53
CPSF7-217ENST00000537162 MYO7AQ13402 2215 aa11.72□□□□□ -0.53
CPSF7-217ENST00000537162 TRIP12Q14669 1992 aaPredicted RBP11.72□□□□□ -0.53
CPSF7-217ENST00000537162 EP300Q09472 2414 aaPredicted RBP11.71□□□□□ -0.53
CPSF7-217ENST00000537162 CBX2Q14781 532 aaPredicted RBP11.71□□□□□ -0.53
CPSF7-217ENST00000537162 WDR43Q15061 677 aaKnown RBP eCLIP11.71□□□□□ -0.53
CPSF7-217ENST00000537162 CERKLQ49MI3 558 aaPredicted RBP11.71□□□□□ -0.53
CPSF7-217ENST00000537162 EPC2Q52LR7 807 aa11.71□□□□□ -0.53
CPSF7-217ENST00000537162 MCTP2Q6DN12 878 aa11.71□□□□□ -0.53
CPSF7-217ENST00000537162 TLK2Q86UE8 772 aa11.71□□□□□ -0.53
CPSF7-217ENST00000537162 RIPOR3Q96MK2 946 aa11.71□□□□□ -0.53
CPSF7-217ENST00000537162 ABHD16BQ9H3Z7 469 aa11.71□□□□□ -0.53
CPSF7-217ENST00000537162 CTNNA3Q9UI47 895 aa11.71□□□□□ -0.53
CPSF7-217ENST00000537162 ZNF214Q9UL59 606 aaPredicted RBP11.71□□□□□ -0.53
CPSF7-217ENST00000537162 ADAMTS5Q9UNA0 930 aa11.71□□□□□ -0.53
CPSF7-217ENST00000537162 GNEQ9Y223 722 aaKnown RBP11.71□□□□□ -0.53
CPSF7-217ENST00000537162 DDX49Q9Y6V7 483 aaKnown RBP11.71□□□□□ -0.53
CPSF7-217ENST00000537162 MYO5AQ9Y4I1 1855 aaKnown RBP11.71□□□□□ -0.53
CPSF7-217ENST00000537162 CEP250Q9BV73 2442 aa11.7□□□□□ -0.54
CPSF7-217ENST00000537162 H3BNC9 293 aa11.7□□□□□ -0.54
CPSF7-217ENST00000537162 VAMP4O75379 141 aa11.7□□□□□ -0.54
CPSF7-217ENST00000537162 HLA-DOAP06340 250 aa11.7□□□□□ -0.54
CPSF7-217ENST00000537162 SHMT1P34896 483 aa11.7□□□□□ -0.54
CPSF7-217ENST00000537162 STAT3P40763 770 aa11.7□□□□□ -0.54
CPSF7-217ENST00000537162 TNFAIP2Q03169 654 aa11.7□□□□□ -0.54
CPSF7-217ENST00000537162 GPM6BQ13491 265 aa11.7□□□□□ -0.54
CPSF7-217ENST00000537162 NBPF20Q3BBV1 942 aa11.7□□□□□ -0.54
CPSF7-217ENST00000537162 NOL8Q76FK4 1167 aaKnown RBP11.7□□□□□ -0.54
CPSF7-217ENST00000537162 ARMCX2Q7L311 632 aa11.7□□□□□ -0.54
CPSF7-217ENST00000537162 CLEC10AQ8IUN9 316 aa11.7□□□□□ -0.54
CPSF7-217ENST00000537162 REPS2Q8NFH8 660 aa11.7□□□□□ -0.54
CPSF7-217ENST00000537162 CEP126Q9P2H0 1117 aa11.7□□□□□ -0.54
CPSF7-217ENST00000537162 CD207Q9UJ71 328 aa11.7□□□□□ -0.54
CPSF7-217ENST00000537162 RIPK3Q9Y572 518 aa11.7□□□□□ -0.54
CPSF7-217ENST00000537162 PCDHGC5Q9Y5F6 944 aa11.7□□□□□ -0.54
CPSF7-217ENST00000537162 FASNP49327 2511 aaKnown RBP11.69□□□□□ -0.54
CPSF7-217ENST00000537162 A0A1B0GUL7 405 aa11.69□□□□□ -0.54
CPSF7-217ENST00000537162 DYNC1LI2O43237 492 aaPredicted RBP11.69□□□□□ -0.54
CPSF7-217ENST00000537162 EVX2Q03828 476 aa11.69□□□□□ -0.54
CPSF7-217ENST00000537162 RSPO4Q2I0M5 234 aaPredicted RBP11.69□□□□□ -0.54
CPSF7-217ENST00000537162 CRBNQ96SW2 442 aa11.69□□□□□ -0.54
CPSF7-217ENST00000537162 PITPNM1O00562 1244 aa11.68□□□□□ -0.54
CPSF7-217ENST00000537162 SUPT20HL2P0C7V6 817 aa11.68□□□□□ -0.54
CPSF7-217ENST00000537162 SMPD1P17405 629 aa11.68□□□□□ -0.54
CPSF7-217ENST00000537162 DYNLL1P63167 89 aaKnown RBP11.68□□□□□ -0.54
CPSF7-217ENST00000537162 CCDC27Q2M243 656 aa11.68□□□□□ -0.54
CPSF7-217ENST00000537162 ZNF467Q7Z7K2 595 aaPredicted RBP11.68□□□□□ -0.54
CPSF7-217ENST00000537162 SIAH1Q8IUQ4 282 aa11.68□□□□□ -0.54
CPSF7-217ENST00000537162 CCDC144CPQ8IYA2 1237 aa11.68□□□□□ -0.54
CPSF7-217ENST00000537162 RETREG2Q8NC44 543 aa11.68□□□□□ -0.54
CPSF7-217ENST00000537162 DDX11Q96FC9 970 aa11.68□□□□□ -0.54
CPSF7-217ENST00000537162 MSLNLQ96KJ4 702 aa11.68□□□□□ -0.54
CPSF7-217ENST00000537162 SEZ6LQ9BYH1 1024 aa11.68□□□□□ -0.54
CPSF7-217ENST00000537162 IGFLR1Q9H665 355 aa11.68□□□□□ -0.54
CPSF7-217ENST00000537162 CABP5Q9NP86 173 aa11.68□□□□□ -0.54
CPSF7-217ENST00000537162 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.68□□□□□ -0.54
CPSF7-217ENST00000537162 SPTBN2O15020 2390 aa11.68□□□□□ -0.54
CPSF7-217ENST00000537162 VWA5AO00534 786 aa11.67□□□□□ -0.54
CPSF7-217ENST00000537162 PPP4CP60510 307 aa11.67□□□□□ -0.54
CPSF7-217ENST00000537162 PTPN21Q16825 1174 aa11.67□□□□□ -0.54
CPSF7-217ENST00000537162 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.67□□□□□ -0.54
CPSF7-217ENST00000537162 DCLK2Q8N568 766 aa11.67□□□□□ -0.54
CPSF7-217ENST00000537162 SPATA5Q8NB90 893 aa11.67□□□□□ -0.54
CPSF7-217ENST00000537162 XAGE2Q96GT9 111 aa11.67□□□□□ -0.54
CPSF7-217ENST00000537162 RPGRIP1Q96KN7 1286 aa11.67□□□□□ -0.54
CPSF7-217ENST00000537162 INCENPQ9NQS7 918 aa11.67□□□□□ -0.54
CPSF7-217ENST00000537162 PDGFCQ9NRA1 345 aa11.67□□□□□ -0.54
CPSF7-217ENST00000537162 SH2B1Q9NRF2 756 aaPredicted RBP11.67□□□□□ -0.54
CPSF7-217ENST00000537162 SERPINB13Q9UIV8 391 aa11.67□□□□□ -0.54
CPSF7-217ENST00000537162 NAV1Q8NEY1 1877 aa11.66□□□□□ -0.54
CPSF7-217ENST00000537162 FAM208BQ5VWN6 2430 aa11.66□□□□□ -0.54
CPSF7-217ENST00000537162 NBNO60934 754 aa11.66□□□□□ -0.54
CPSF7-217ENST00000537162 CIAO1O76071 339 aa11.66□□□□□ -0.54
CPSF7-217ENST00000537162 CSPG5O95196 566 aa11.66□□□□□ -0.54
CPSF7-217ENST00000537162 EYA4O95677 639 aa11.66□□□□□ -0.54
CPSF7-217ENST00000537162 ICAM3P32942 547 aa11.66□□□□□ -0.54
CPSF7-217ENST00000537162 RRP1P56182 461 aaKnown RBP11.66□□□□□ -0.54
CPSF7-217ENST00000537162 ATF7IPQ6VMQ6 1270 aa11.66□□□□□ -0.54
CPSF7-217ENST00000537162 SP7Q8TDD2 431 aaPredicted RBP11.66□□□□□ -0.54
CPSF7-217ENST00000537162 KCNG4Q8TDN1 519 aa11.66□□□□□ -0.54
CPSF7-217ENST00000537162 NOL10Q9BSC4 688 aaKnown RBP11.66□□□□□ -0.54
CPSF7-217ENST00000537162 AP5M1Q9H0R1 490 aa11.66□□□□□ -0.54
CPSF7-217ENST00000537162 PA2G4Q9UQ80 394 aaKnown RBP11.66□□□□□ -0.54
CPSF7-217ENST00000537162 RALGAPA2Q2PPJ7 1873 aa11.66□□□□□ -0.54
CPSF7-217ENST00000537162 BAG3O95817 575 aa11.65□□□□□ -0.54
CPSF7-217ENST00000537162 PLCG2P16885 1265 aa11.65□□□□□ -0.54
CPSF7-217ENST00000537162 PLCD1P51178 756 aa11.65□□□□□ -0.54
CPSF7-217ENST00000537162 HTRA4P83105 476 aaPredicted RBP11.65□□□□□ -0.54
CPSF7-217ENST00000537162 CNTN2Q02246 1040 aa11.65□□□□□ -0.54
CPSF7-217ENST00000537162 ADAM15Q13444 863 aa11.65□□□□□ -0.54
CPSF7-217ENST00000537162 FAM47CQ5HY64 1035 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms