RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 GPCPD1Q9NPB8 672 aa15.29■□□□□ 0.04
SMG6-203ENST00000536871 FAM198AQ9UFP1 575 aa15.29■□□□□ 0.04
SMG6-203ENST00000536871 ADAMTS3O15072 1205 aa15.29■□□□□ 0.04
SMG6-203ENST00000536871 RHOBTB3O94955 611 aa15.29■□□□□ 0.04
SMG6-203ENST00000536871 TBX2Q13207 712 aaPredicted RBP15.29■□□□□ 0.04
SMG6-203ENST00000536871 CALCRLQ16602 461 aa15.29■□□□□ 0.04
SMG6-203ENST00000536871 AOC3Q16853 763 aa15.29■□□□□ 0.04
SMG6-203ENST00000536871 NYAP1Q6ZVC0 841 aa15.29■□□□□ 0.04
SMG6-203ENST00000536871 TTLL6Q8N841 843 aa15.29■□□□□ 0.04
SMG6-203ENST00000536871 GMCL1Q96IK5 515 aa15.29■□□□□ 0.04
SMG6-203ENST00000536871 MYH8P13535 1937 aa15.29■□□□□ 0.04
SMG6-203ENST00000536871 LRRC10BA6NIK2 292 aa15.28■□□□□ 0.04
SMG6-203ENST00000536871 ZSCAN12O43309 604 aa15.28■□□□□ 0.04
SMG6-203ENST00000536871 STX10O60499 249 aa15.28■□□□□ 0.04
SMG6-203ENST00000536871 TPM1P09493 284 aa15.28■□□□□ 0.04
SMG6-203ENST00000536871 CHRNA5P30532 468 aa15.28■□□□□ 0.04
SMG6-203ENST00000536871 SLC1A4P43007 532 aa15.28■□□□□ 0.04
SMG6-203ENST00000536871 CLK2P49760 499 aaKnown RBP15.28■□□□□ 0.04
SMG6-203ENST00000536871 ARID5BQ14865 1188 aa15.28■□□□□ 0.04
SMG6-203ENST00000536871 COBLL1Q53SF7 1204 aa15.28■□□□□ 0.04
SMG6-203ENST00000536871 NAALADL2Q58DX5 795 aa15.28■□□□□ 0.04
SMG6-203ENST00000536871 JAKMIP3Q5VZ66 844 aa15.28■□□□□ 0.04
SMG6-203ENST00000536871 DPF2Q92785 391 aa15.28■□□□□ 0.04
SMG6-203ENST00000536871 MTMR9Q96QG7 549 aa15.28■□□□□ 0.04
SMG6-203ENST00000536871 NAA15Q9BXJ9 866 aaKnown RBP15.28■□□□□ 0.04
SMG6-203ENST00000536871 CPVLQ9H3G5 476 aa15.28■□□□□ 0.04
SMG6-203ENST00000536871 BIN2Q9UBW5 565 aaPredicted RBP15.28■□□□□ 0.04
SMG6-203ENST00000536871 ITIH6Q6UXX5 1313 aa15.28■□□□□ 0.04
SMG6-203ENST00000536871 PSMA7O14818 248 aa15.27■□□□□ 0.04
SMG6-203ENST00000536871 BAG6P46379 1132 aa15.27■□□□□ 0.04
SMG6-203ENST00000536871 EIF6P56537 245 aaKnown RBP15.27■□□□□ 0.04
SMG6-203ENST00000536871 ATP2B2Q01814 1243 aa15.27■□□□□ 0.04
SMG6-203ENST00000536871 ICA1Q05084 483 aa15.27■□□□□ 0.04
SMG6-203ENST00000536871 AP3B2Q13367 1082 aa15.27■□□□□ 0.04
SMG6-203ENST00000536871 SF3B2Q13435 895 aaKnown RBP15.27■□□□□ 0.04
SMG6-203ENST00000536871 TRIM14Q14142 442 aa15.27■□□□□ 0.04
SMG6-203ENST00000536871 ABCB5Q2M3G0 1257 aa15.27■□□□□ 0.04
SMG6-203ENST00000536871 RBM26Q5T8P6 1007 aaKnown RBP15.27■□□□□ 0.04
SMG6-203ENST00000536871 FKBP1CQ5VVH2 108 aa15.27■□□□□ 0.04
SMG6-203ENST00000536871 CEP135Q66GS9 1140 aa15.27■□□□□ 0.04
SMG6-203ENST00000536871 SLFN13Q68D06 897 aa15.27■□□□□ 0.04
SMG6-203ENST00000536871 MOXD1Q6UVY6 613 aa15.27■□□□□ 0.04
SMG6-203ENST00000536871 TRMT44Q8IYL2 757 aaKnown RBP15.27■□□□□ 0.04
SMG6-203ENST00000536871 CCDC51Q96ER9 411 aa15.27■□□□□ 0.04
SMG6-203ENST00000536871 DHTKD1Q96HY7 919 aaPredicted RBP15.27■□□□□ 0.04
SMG6-203ENST00000536871 C16orf45Q96MC5 204 aaPredicted RBP15.27■□□□□ 0.04
SMG6-203ENST00000536871 MTRQ99707 1265 aa15.27■□□□□ 0.04
SMG6-203ENST00000536871 C7orf25Q9BPX7 421 aa15.27■□□□□ 0.04
SMG6-203ENST00000536871 PSTPIP2Q9H939 334 aa15.27■□□□□ 0.04
SMG6-203ENST00000536871 LIMA1Q9UHB6 759 aaKnown RBP15.27■□□□□ 0.04
SMG6-203ENST00000536871 STK24Q9Y6E0 443 aa15.27■□□□□ 0.04
SMG6-203ENST00000536871 BICDL2A1A5D9 508 aa15.27■□□□□ 0.03
SMG6-203ENST00000536871 DDTLA6NHG4 134 aaPredicted RBP15.27■□□□□ 0.03
SMG6-203ENST00000536871 EEF2P13639 858 aaKnown RBP15.27■□□□□ 0.03
SMG6-203ENST00000536871 CD44P16070 742 aaKnown RBP15.27■□□□□ 0.03
SMG6-203ENST00000536871 USP11P51784 963 aa15.27■□□□□ 0.03
SMG6-203ENST00000536871 SYCP1Q15431 976 aa15.27■□□□□ 0.03
SMG6-203ENST00000536871 EZH2Q15910 746 aaKnown RBP15.27■□□□□ 0.03
SMG6-203ENST00000536871 KLHL10Q6JEL2 608 aa15.27■□□□□ 0.03
SMG6-203ENST00000536871 RSBN1LQ6PCB5 846 aaPredicted RBP15.27■□□□□ 0.03
SMG6-203ENST00000536871 ADSSL1Q8N142 457 aa15.27■□□□□ 0.03
SMG6-203ENST00000536871 BLZF1Q9H2G9 400 aa15.27■□□□□ 0.03
SMG6-203ENST00000536871 DNAJC18Q9H819 358 aa15.27■□□□□ 0.03
SMG6-203ENST00000536871 SAMSN1Q9NSI8 373 aaKnown RBP15.27■□□□□ 0.03
SMG6-203ENST00000536871 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.27■□□□□ 0.03
SMG6-203ENST00000536871 SLX4Q8IY92 1834 aa15.26■□□□□ 0.03
SMG6-203ENST00000536871 TCP10Q12799 353 aa15.26■□□□□ 0.03
SMG6-203ENST00000536871 OGFOD1Q8N543 542 aa15.26■□□□□ 0.03
SMG6-203ENST00000536871 KIF18AQ8NI77 898 aa15.26■□□□□ 0.03
SMG6-203ENST00000536871 COA7Q96BR5 231 aa15.26■□□□□ 0.03
SMG6-203ENST00000536871 CDK5RAP3Q96JB5 506 aa15.26■□□□□ 0.03
SMG6-203ENST00000536871 PANX2Q96RD6 677 aa15.26■□□□□ 0.03
SMG6-203ENST00000536871 MED15Q96RN5 788 aa15.26■□□□□ 0.03
SMG6-203ENST00000536871 KCNQ5Q9NR82 932 aa15.26■□□□□ 0.03
SMG6-203ENST00000536871 ADD3Q9UEY8 706 aaKnown RBP15.26■□□□□ 0.03
SMG6-203ENST00000536871 LRWD1Q9UFC0 647 aa15.26■□□□□ 0.03
SMG6-203ENST00000536871 CTNND2Q9UQB3 1225 aa15.26■□□□□ 0.03
SMG6-203ENST00000536871 BAZ2BQ9UIF8 2168 aaKnown RBP15.26■□□□□ 0.03
SMG6-203ENST00000536871 FOSP01100 380 aaPredicted RBP15.25■□□□□ 0.03
SMG6-203ENST00000536871 EEF1GP26641 437 aaKnown RBP15.25■□□□□ 0.03
SMG6-203ENST00000536871 EN1Q05925 392 aaPredicted RBP15.25■□□□□ 0.03
SMG6-203ENST00000536871 SEPT2Q15019 361 aa15.25■□□□□ 0.03
SMG6-203ENST00000536871 KRT79Q5XKE5 535 aa15.25■□□□□ 0.03
SMG6-203ENST00000536871 CNNM4Q6P4Q7 775 aa15.25■□□□□ 0.03
SMG6-203ENST00000536871 RASGRP2Q7LDG7 609 aa15.25■□□□□ 0.03
SMG6-203ENST00000536871 PPFIBP1Q86W92 1011 aa15.25■□□□□ 0.03
SMG6-203ENST00000536871 GIMAP8Q8ND71 665 aaPredicted RBP15.25■□□□□ 0.03
SMG6-203ENST00000536871 NELFBQ8WX92 580 aa15.25■□□□□ 0.03
SMG6-203ENST00000536871 THAP9Q9H5L6 903 aa15.25■□□□□ 0.03
SMG6-203ENST00000536871 INTS13Q9NVM9 706 aa15.25■□□□□ 0.03
SMG6-203ENST00000536871 KDM3AQ9Y4C1 1321 aa15.25■□□□□ 0.03
SMG6-203ENST00000536871 PVALEFA0A1B0GWK0 134 aa15.25■□□□□ 0.03
SMG6-203ENST00000536871 VIL1P09327 827 aaKnown RBP15.25■□□□□ 0.03
SMG6-203ENST00000536871 PLCG1P19174 1290 aa15.25■□□□□ 0.03
SMG6-203ENST00000536871 SV2BQ7L1I2 683 aa15.25■□□□□ 0.03
SMG6-203ENST00000536871 CNGA4Q8IV77 575 aa15.25■□□□□ 0.03
SMG6-203ENST00000536871 FAM114A1Q8IWE2 563 aa15.25■□□□□ 0.03
SMG6-203ENST00000536871 ZFPM1Q8IX07 1006 aa15.25■□□□□ 0.03
SMG6-203ENST00000536871 BAG1Q99933 345 aaPredicted RBP15.25■□□□□ 0.03
SMG6-203ENST00000536871 AMNQ9BXJ7 453 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms