RNA–Protein interactions for RNA: ENST00000535290.5

CLIP1-206, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-206ENST00000535290 SUPT20HL2P0C7V6 817 aa10.04□□□□□ -0.8
CLIP1-206ENST00000535290 IRS1P35568 1242 aa10.04□□□□□ -0.8
CLIP1-206ENST00000535290 ERVK-21P61565 698 aa10.04□□□□□ -0.8
CLIP1-206ENST00000535290 CNTN2Q02246 1040 aa10.04□□□□□ -0.8
CLIP1-206ENST00000535290 TNNI3KQ59H18 835 aa10.04□□□□□ -0.8
CLIP1-206ENST00000535290 CPXCR1Q8N123 301 aa10.04□□□□□ -0.8
CLIP1-206ENST00000535290 ANKRD35Q8N283 1001 aa10.04□□□□□ -0.8
CLIP1-206ENST00000535290 NUP88Q99567 741 aaPredicted RBP10.04□□□□□ -0.8
CLIP1-206ENST00000535290 AP5M1Q9H0R1 490 aa10.04□□□□□ -0.8
CLIP1-206ENST00000535290 ANTXR1Q9H6X2 564 aa10.04□□□□□ -0.8
CLIP1-206ENST00000535290 PDGFCQ9NRA1 345 aa10.04□□□□□ -0.8
CLIP1-206ENST00000535290 MUTYHQ9UIF7 546 aa10.04□□□□□ -0.8
CLIP1-206ENST00000535290 FPGT-TNNI3KV9GXZ4 949 aa10.04□□□□□ -0.8
CLIP1-206ENST00000535290 PNMA6EA0A0J9YXQ4 647 aa10.03□□□□□ -0.8
CLIP1-206ENST00000535290 ZEB2O60315 1214 aa10.03□□□□□ -0.8
CLIP1-206ENST00000535290 RFC2P35250 354 aa10.03□□□□□ -0.8
CLIP1-206ENST00000535290 ADHFE1Q8IWW8 467 aa10.03□□□□□ -0.8
CLIP1-206ENST00000535290 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.03□□□□□ -0.8
CLIP1-206ENST00000535290 PPP1R13LQ8WUF5 828 aa10.03□□□□□ -0.8
CLIP1-206ENST00000535290 SDR42E1Q8WUS8 393 aa10.03□□□□□ -0.8
CLIP1-206ENST00000535290 TGS1Q96RS0 853 aaKnown RBP10.03□□□□□ -0.8
CLIP1-206ENST00000535290 SLF1Q9BQI6 1058 aa10.03□□□□□ -0.8
CLIP1-206ENST00000535290 ZBED2Q9BTP6 218 aa10.03□□□□□ -0.8
CLIP1-206ENST00000535290 RAVER2Q9HCJ3 691 aaKnown RBP10.03□□□□□ -0.8
CLIP1-206ENST00000535290 ALG13Q9NP73 1137 aaKnown RBP10.03□□□□□ -0.8
CLIP1-206ENST00000535290 GPR108Q9NPR9 543 aa10.03□□□□□ -0.8
CLIP1-206ENST00000535290 SMC4Q9NTJ3 1288 aa10.03□□□□□ -0.8
CLIP1-206ENST00000535290 NOB1Q9ULX3 412 aaKnown RBP10.03□□□□□ -0.8
CLIP1-206ENST00000535290 FAM186AA6NE01 2351 aa10.03□□□□□ -0.8
CLIP1-206ENST00000535290 MAGEB6P1A0A0J9YX57 407 aa10.02□□□□□ -0.81
CLIP1-206ENST00000535290 LINC01553A4QN01 128 aa10.02□□□□□ -0.81
CLIP1-206ENST00000535290 ATP2A1O14983 1001 aa10.02□□□□□ -0.81
CLIP1-206ENST00000535290 BAIAP3O94812 1187 aa10.02□□□□□ -0.81
CLIP1-206ENST00000535290 KCNJ6P48051 423 aa10.02□□□□□ -0.81
CLIP1-206ENST00000535290 WDR5P61964 334 aaKnown RBP10.02□□□□□ -0.81
CLIP1-206ENST00000535290 DEFB103AP81534 67 aa10.02□□□□□ -0.81
CLIP1-206ENST00000535290 GPNMBQ14956 572 aa10.02□□□□□ -0.81
CLIP1-206ENST00000535290 HERC4Q5GLZ8 1057 aaPredicted RBP10.02□□□□□ -0.81
CLIP1-206ENST00000535290 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.02□□□□□ -0.81
CLIP1-206ENST00000535290 FAM133AQ8N9E0 248 aa10.02□□□□□ -0.81
CLIP1-206ENST00000535290 TET1Q8NFU7 2136 aa10.02□□□□□ -0.81
CLIP1-206ENST00000535290 UPF3BQ9BZI7 483 aaKnown RBP10.02□□□□□ -0.81
CLIP1-206ENST00000535290 MRS2Q9HD23 443 aa10.02□□□□□ -0.81
CLIP1-206ENST00000535290 GOPCQ9HD26 462 aa10.02□□□□□ -0.81
CLIP1-206ENST00000535290 DCP1AQ9NPI6 582 aaPredicted RBP10.02□□□□□ -0.81
CLIP1-206ENST00000535290 TLR7Q9NYK1 1049 aaKnown RBP10.02□□□□□ -0.81
CLIP1-206ENST00000535290 PRKAG3Q9UGI9 489 aa10.02□□□□□ -0.81
CLIP1-206ENST00000535290 SWAP70Q9UH65 585 aa10.02□□□□□ -0.81
CLIP1-206ENST00000535290 DBNLQ9UJU6 430 aaKnown RBP10.02□□□□□ -0.81
CLIP1-206ENST00000535290 COL11A1P12107 1806 aaPredicted RBP10.02□□□□□ -0.81
CLIP1-206ENST00000535290 COL4A4P53420 1690 aaPredicted RBP10.02□□□□□ -0.81
CLIP1-206ENST00000535290 MCM3APO60318 1980 aa10.01□□□□□ -0.81
CLIP1-206ENST00000535290 PARP14Q460N5 1801 aa10.01□□□□□ -0.81
CLIP1-206ENST00000535290 SCN5AQ14524 2016 aa10.01□□□□□ -0.81
CLIP1-206ENST00000535290 MYO7AQ13402 2215 aa10.01□□□□□ -0.81
CLIP1-206ENST00000535290 SOWAHBA6NEL2 793 aa10.01□□□□□ -0.81
CLIP1-206ENST00000535290 GNAI3P08754 354 aa10.01□□□□□ -0.81
CLIP1-206ENST00000535290 ALDH1L2Q3SY69 923 aa10.01□□□□□ -0.81
CLIP1-206ENST00000535290 TAPT1Q6NXT6 567 aa10.01□□□□□ -0.81
CLIP1-206ENST00000535290 EP400NLQ6ZTU2 488 aa10.01□□□□□ -0.81
CLIP1-206ENST00000535290 EEPD1Q7L9B9 569 aa10.01□□□□□ -0.81
CLIP1-206ENST00000535290 BMP8AQ7Z5Y6 402 aa10.01□□□□□ -0.81
CLIP1-206ENST00000535290 RETREG2Q8NC44 543 aa10.01□□□□□ -0.81
CLIP1-206ENST00000535290 SPOCK2Q92563 424 aa10.01□□□□□ -0.81
CLIP1-206ENST00000535290 PBXIP1Q96AQ6 731 aa10.01□□□□□ -0.81
CLIP1-206ENST00000535290 CCDC17Q96LX7 622 aa10.01□□□□□ -0.81
CLIP1-206ENST00000535290 C17orf80Q9BSJ5 609 aa10.01□□□□□ -0.81
CLIP1-206ENST00000535290 CRNKL1Q9BZJ0 848 aaKnown RBP10.01□□□□□ -0.81
CLIP1-206ENST00000535290 KANSL2Q9H9L4 492 aa10.01□□□□□ -0.81
CLIP1-206ENST00000535290 MYO5AQ9Y4I1 1855 aaKnown RBP10.01□□□□□ -0.81
CLIP1-206ENST00000535290 EPG5Q9HCE0 2579 aa10□□□□□ -0.81
CLIP1-206ENST00000535290 CYP2D7A0A087X1C5 515 aa10□□□□□ -0.81
CLIP1-206ENST00000535290 GJB5O95377 273 aa10□□□□□ -0.81
CLIP1-206ENST00000535290 CDK8P49336 464 aa10□□□□□ -0.81
CLIP1-206ENST00000535290 PURAQ00577 322 aaKnown RBP10□□□□□ -0.81
CLIP1-206ENST00000535290 TCTN1Q2MV58 587 aa10□□□□□ -0.81
CLIP1-206ENST00000535290 NBPF20Q3BBV1 942 aa10□□□□□ -0.81
CLIP1-206ENST00000535290 FAM47CQ5HY64 1035 aa10□□□□□ -0.81
CLIP1-206ENST00000535290 IQSEC1Q6DN90 963 aa10□□□□□ -0.81
CLIP1-206ENST00000535290 FAM117BQ6P1L5 589 aa10□□□□□ -0.81
CLIP1-206ENST00000535290 RNF135Q8IUD6 432 aa10□□□□□ -0.81
CLIP1-206ENST00000535290 FBXO16Q8IX29 292 aaPredicted RBP10□□□□□ -0.81
CLIP1-206ENST00000535290 PRPF38AQ8NAV1 312 aaKnown RBP10□□□□□ -0.81
CLIP1-206ENST00000535290 CHST13Q8NET6 341 aa10□□□□□ -0.81
CLIP1-206ENST00000535290 EDAQ92838 391 aa10□□□□□ -0.81
CLIP1-206ENST00000535290 PABPC5Q96DU9 382 aaKnown RBP10□□□□□ -0.81
CLIP1-206ENST00000535290 MRPL38Q96DV4 380 aaKnown RBP10□□□□□ -0.81
CLIP1-206ENST00000535290 RAD9AQ99638 391 aa10□□□□□ -0.81
CLIP1-206ENST00000535290 GNL3Q9BVP2 549 aaKnown RBP eCLIP10□□□□□ -0.81
CLIP1-206ENST00000535290 API5Q9BZZ5 524 aaKnown RBP10□□□□□ -0.81
CLIP1-206ENST00000535290 CCDC8Q9H0W5 538 aaPredicted RBP10□□□□□ -0.81
CLIP1-206ENST00000535290 HOMER2Q9NSB8 354 aa10□□□□□ -0.81
CLIP1-206ENST00000535290 FBXO40Q9UH90 709 aa10□□□□□ -0.81
CLIP1-206ENST00000535290 FAM50BQ9Y247 325 aa10□□□□□ -0.81
CLIP1-206ENST00000535290 Q9Y3F1 56 aa10□□□□□ -0.81
CLIP1-206ENST00000535290 GVINP1Q7Z2Y8 2422 aa9.99□□□□□ -0.81
CLIP1-206ENST00000535290 TPRP12270 2363 aaKnown RBP9.99□□□□□ -0.81
CLIP1-206ENST00000535290 TMEM221A6NGB7 291 aa9.99□□□□□ -0.81
CLIP1-206ENST00000535290 M0R296 226 aa9.99□□□□□ -0.81
CLIP1-206ENST00000535290 PRKAB2O43741 272 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms