RNA–Protein interactions for RNA: ENST00000535236.5

SFSWAP-203, Transcript of splicing factor SWAP, humanhuman

TSL 1 (best)

Gene SFSWAP, Length 5,593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-203ENST00000535236 SEMA3EO15041 775 aa19.89■□□□□ 0.77
SFSWAP-203ENST00000535236 NSFP46459 744 aaKnown RBP19.89■□□□□ 0.77
SFSWAP-203ENST00000535236 VPS41P49754 854 aa19.89■□□□□ 0.77
SFSWAP-203ENST00000535236 AMNQ9BXJ7 453 aa19.89■□□□□ 0.77
SFSWAP-203ENST00000535236 AP5M1Q9H0R1 490 aa19.89■□□□□ 0.77
SFSWAP-203ENST00000535236 BUB1O43683 1085 aa19.89■□□□□ 0.77
SFSWAP-203ENST00000535236 PCP11498 1178 aaKnown RBP19.89■□□□□ 0.77
SFSWAP-203ENST00000535236 PPP2R5AQ15172 486 aa19.89■□□□□ 0.77
SFSWAP-203ENST00000535236 TRIM56Q9BRZ2 755 aaKnown RBP19.89■□□□□ 0.77
SFSWAP-203ENST00000535236 DISC1Q9NRI5 854 aa19.89■□□□□ 0.77
SFSWAP-203ENST00000535236 ERBB4Q15303 1308 aa19.89■□□□□ 0.77
SFSWAP-203ENST00000535236 PER1O15534 1290 aaPredicted RBP19.89■□□□□ 0.77
SFSWAP-203ENST00000535236 CYP4A11Q02928 519 aa19.89■□□□□ 0.77
SFSWAP-203ENST00000535236 BFSP1Q12934 665 aa19.89■□□□□ 0.77
SFSWAP-203ENST00000535236 SKA2Q8WVK7 121 aaPredicted RBP19.89■□□□□ 0.77
SFSWAP-203ENST00000535236 NCAPGQ9BPX3 1015 aa19.89■□□□□ 0.77
SFSWAP-203ENST00000535236 PLEKHG3A1L390 1219 aa19.88■□□□□ 0.77
SFSWAP-203ENST00000535236 RPN1P04843 607 aaKnown RBP19.88■□□□□ 0.77
SFSWAP-203ENST00000535236 SSH3Q8TE77 659 aa19.88■□□□□ 0.77
SFSWAP-203ENST00000535236 CCDC17Q96LX7 622 aa19.88■□□□□ 0.77
SFSWAP-203ENST00000535236 WHAMMP3Q1A5X7 153 aa19.88■□□□□ 0.77
SFSWAP-203ENST00000535236 EAF2Q96CJ1 260 aaPredicted RBP19.88■□□□□ 0.77
SFSWAP-203ENST00000535236 CLRN2A0PK11 232 aa19.88■□□□□ 0.77
SFSWAP-203ENST00000535236 PTPREP23469 700 aa19.88■□□□□ 0.77
SFSWAP-203ENST00000535236 RASSF2P50749 326 aa19.88■□□□□ 0.77
SFSWAP-203ENST00000535236 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.88■□□□□ 0.77
SFSWAP-203ENST00000535236 AKT3Q9Y243 479 aa19.88■□□□□ 0.77
SFSWAP-203ENST00000535236 TYW5A2RUC4 315 aaKnown RBP19.88■□□□□ 0.77
SFSWAP-203ENST00000535236 LONP1P36776 959 aaKnown RBP19.88■□□□□ 0.77
SFSWAP-203ENST00000535236 USP14P54578 494 aa19.88■□□□□ 0.77
SFSWAP-203ENST00000535236 PTH1RQ03431 593 aa19.88■□□□□ 0.77
SFSWAP-203ENST00000535236 PRPSAP1Q14558 356 aa19.88■□□□□ 0.77
SFSWAP-203ENST00000535236 TRIML1Q8N9V2 468 aa19.88■□□□□ 0.77
SFSWAP-203ENST00000535236 MAST1Q9Y2H9 1570 aa19.87■□□□□ 0.77
SFSWAP-203ENST00000535236 LOC102724428A0A0B4J2F2 783 aa19.87■□□□□ 0.77
SFSWAP-203ENST00000535236 SIK1P57059 783 aa19.87■□□□□ 0.77
SFSWAP-203ENST00000535236 ZNF445P59923 1031 aa19.87■□□□□ 0.77
SFSWAP-203ENST00000535236 ODR4Q5SWX8 454 aa19.87■□□□□ 0.77
SFSWAP-203ENST00000535236 C17orf53Q8N3J3 647 aaPredicted RBP19.87■□□□□ 0.77
SFSWAP-203ENST00000535236 ATP6V0A1Q93050 837 aa19.87■□□□□ 0.77
SFSWAP-203ENST00000535236 A0A1B0GUA9 196 aa19.87■□□□□ 0.77
SFSWAP-203ENST00000535236 FGAP02671 866 aa19.87■□□□□ 0.77
SFSWAP-203ENST00000535236 TYW1Q9NV66 732 aaKnown RBP19.87■□□□□ 0.77
SFSWAP-203ENST00000535236 TRIM37O94972 964 aa19.87■□□□□ 0.77
SFSWAP-203ENST00000535236 KRT3P12035 628 aa19.87■□□□□ 0.77
SFSWAP-203ENST00000535236 XPAP23025 273 aaPredicted RBP19.87■□□□□ 0.77
SFSWAP-203ENST00000535236 LRCH2Q5VUJ6 765 aa19.87■□□□□ 0.77
SFSWAP-203ENST00000535236 SLC17A8Q8NDX2 589 aa19.87■□□□□ 0.77
SFSWAP-203ENST00000535236 JPH2Q9BR39 696 aaPredicted RBP19.87■□□□□ 0.77
SFSWAP-203ENST00000535236 USP44Q9H0E7 712 aa19.87■□□□□ 0.77
SFSWAP-203ENST00000535236 LRFN2Q9ULH4 789 aa19.87■□□□□ 0.77
SFSWAP-203ENST00000535236 SAT1P21673 171 aa19.86■□□□□ 0.77
SFSWAP-203ENST00000535236 GARSP41250 739 aaKnown RBP19.86■□□□□ 0.77
SFSWAP-203ENST00000535236 CRKLP46109 303 aaKnown RBP19.86■□□□□ 0.77
SFSWAP-203ENST00000535236 PTPROQ16827 1216 aa19.86■□□□□ 0.77
SFSWAP-203ENST00000535236 CAPN12Q6ZSI9 719 aa19.86■□□□□ 0.77
SFSWAP-203ENST00000535236 MAP7D3Q8IWC1 876 aa19.86■□□□□ 0.77
SFSWAP-203ENST00000535236 USP28Q96RU2 1077 aa19.86■□□□□ 0.77
SFSWAP-203ENST00000535236 GREM2Q9H772 168 aa19.86■□□□□ 0.77
SFSWAP-203ENST00000535236 LEMD3Q9Y2U8 911 aa19.86■□□□□ 0.77
SFSWAP-203ENST00000535236 TCOF1Q13428 1488 aaKnown RBP19.86■□□□□ 0.77
SFSWAP-203ENST00000535236 HNRNPDLO14979 420 aaKnown RBP19.86■□□□□ 0.77
SFSWAP-203ENST00000535236 H2AFZP0C0S5 128 aa19.86■□□□□ 0.77
SFSWAP-203ENST00000535236 PTK2Q05397 1052 aa19.86■□□□□ 0.77
SFSWAP-203ENST00000535236 TSTA3Q13630 321 aaPredicted RBP19.86■□□□□ 0.77
SFSWAP-203ENST00000535236 MAP3K21Q5TCX8 1036 aa19.86■□□□□ 0.77
SFSWAP-203ENST00000535236 H2AFVQ71UI9 128 aa19.86■□□□□ 0.77
SFSWAP-203ENST00000535236 BBS5Q8N3I7 341 aa19.86■□□□□ 0.77
SFSWAP-203ENST00000535236 RETREG2Q8NC44 543 aa19.86■□□□□ 0.77
SFSWAP-203ENST00000535236 GJA10Q969M2 543 aa19.86■□□□□ 0.77
SFSWAP-203ENST00000535236 CMA1P23946 247 aa19.86■□□□□ 0.77
SFSWAP-203ENST00000535236 MYL7Q01449 175 aa19.86■□□□□ 0.77
SFSWAP-203ENST00000535236 FAM71BQ8TC56 605 aa19.86■□□□□ 0.77
SFSWAP-203ENST00000535236 HOMER3Q9NSC5 361 aa19.86■□□□□ 0.77
SFSWAP-203ENST00000535236 KIAA0556O60303 1618 aa19.86■□□□□ 0.77
SFSWAP-203ENST00000535236 H7C0C1 242 aa19.86■□□□□ 0.77
SFSWAP-203ENST00000535236 ATF2P15336 505 aa19.86■□□□□ 0.77
SFSWAP-203ENST00000535236 ATP5OP48047 213 aa19.86■□□□□ 0.77
SFSWAP-203ENST00000535236 MFAP3P55082 362 aa19.86■□□□□ 0.77
SFSWAP-203ENST00000535236 BPIFB4P59827 614 aa19.86■□□□□ 0.77
SFSWAP-203ENST00000535236 KAZNQ674X7 775 aa19.86■□□□□ 0.77
SFSWAP-203ENST00000535236 SPICE1Q8N0Z3 855 aa19.86■□□□□ 0.77
SFSWAP-203ENST00000535236 ANAPC5Q9UJX4 755 aa19.86■□□□□ 0.77
SFSWAP-203ENST00000535236 SSH2Q76I76 1423 aa19.86■□□□□ 0.77
SFSWAP-203ENST00000535236 UBE3CQ15386 1083 aa19.86■□□□□ 0.77
SFSWAP-203ENST00000535236 GPATCH4Q5T3I0 446 aaKnown RBP19.86■□□□□ 0.77
SFSWAP-203ENST00000535236 METTL23Q86XA0 190 aa19.86■□□□□ 0.77
SFSWAP-203ENST00000535236 ANKRD36BP1Q96IX9 119 aa19.86■□□□□ 0.77
SFSWAP-203ENST00000535236 TRPC5Q9UL62 973 aaPredicted RBP19.86■□□□□ 0.77
SFSWAP-203ENST00000535236 KIAA1024Q9UPX6 916 aa19.86■□□□□ 0.77
SFSWAP-203ENST00000535236 ZMYM4Q5VZL5 1548 aa19.86■□□□□ 0.77
SFSWAP-203ENST00000535236 BTBD18B2RXH4 712 aa19.85■□□□□ 0.77
SFSWAP-203ENST00000535236 THAP12O43422 761 aa19.85■□□□□ 0.77
SFSWAP-203ENST00000535236 LMNB1P20700 586 aa19.85■□□□□ 0.77
SFSWAP-203ENST00000535236 ASPRV1Q53RT3 343 aa19.85■□□□□ 0.77
SFSWAP-203ENST00000535236 GBP7Q8N8V2 638 aaPredicted RBP19.85■□□□□ 0.77
SFSWAP-203ENST00000535236 GDAP1L1Q96MZ0 367 aa19.85■□□□□ 0.77
SFSWAP-203ENST00000535236 ZNF577Q9BSK1 485 aa19.85■□□□□ 0.77
SFSWAP-203ENST00000535236 S100BP04271 92 aaPredicted RBP19.85■□□□□ 0.77
SFSWAP-203ENST00000535236 TAB3Q8N5C8 712 aaPredicted RBP19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms