RNA–Protein interactions for RNA: ENST00000534830.5

CLSTN3-203, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-203ENST00000534830 YTHDC1Q96MU7 727 aaKnown RBP11.94□□□□□ -0.5
CLSTN3-203ENST00000534830 TINF2Q9BSI4 451 aa11.94□□□□□ -0.5
CLSTN3-203ENST00000534830 TEX13BQ9BXU2 312 aa11.94□□□□□ -0.5
CLSTN3-203ENST00000534830 LNPKQ9C0E8 428 aa11.94□□□□□ -0.5
CLSTN3-203ENST00000534830 RWDD1Q9H446 243 aaPredicted RBP11.94□□□□□ -0.5
CLSTN3-203ENST00000534830 ZBTB47Q9UFB7 747 aaPredicted RBP11.94□□□□□ -0.5
CLSTN3-203ENST00000534830 YBX2Q9Y2T7 364 aaKnown RBP11.94□□□□□ -0.5
CLSTN3-203ENST00000534830 PRRC2BQ5JSZ5 2229 aaKnown RBP11.94□□□□□ -0.5
CLSTN3-203ENST00000534830 ZMYM6O95789 1325 aa11.93□□□□□ -0.5
CLSTN3-203ENST00000534830 ORC4O43929 436 aa11.93□□□□□ -0.5
CLSTN3-203ENST00000534830 ADAMTS4O75173 837 aa11.93□□□□□ -0.5
CLSTN3-203ENST00000534830 FGAP02671 866 aa11.93□□□□□ -0.5
CLSTN3-203ENST00000534830 ZNF865P0CJ78 1059 aaPredicted RBP11.93□□□□□ -0.5
CLSTN3-203ENST00000534830 FDX1P10109 184 aa11.93□□□□□ -0.5
CLSTN3-203ENST00000534830 HSPD1P10809 573 aaKnown RBP11.93□□□□□ -0.5
CLSTN3-203ENST00000534830 BMP3P12645 472 aa11.93□□□□□ -0.5
CLSTN3-203ENST00000534830 RABGGTBP53611 331 aa11.93□□□□□ -0.5
CLSTN3-203ENST00000534830 OAZ1P54368 228 aa11.93□□□□□ -0.5
CLSTN3-203ENST00000534830 NUCB1Q02818 461 aa11.93□□□□□ -0.5
CLSTN3-203ENST00000534830 KCTD2Q14681 263 aa11.93□□□□□ -0.5
CLSTN3-203ENST00000534830 KCNA10Q16322 511 aa11.93□□□□□ -0.5
CLSTN3-203ENST00000534830 SNRNP48Q6IEG0 339 aaKnown RBP11.93□□□□□ -0.5
CLSTN3-203ENST00000534830 MAMDC4Q6UXC1 1216 aa11.93□□□□□ -0.5
CLSTN3-203ENST00000534830 ZNF589Q86UQ0 364 aaPredicted RBP11.93□□□□□ -0.5
CLSTN3-203ENST00000534830 MSL3Q8N5Y2 521 aaKnown RBP11.93□□□□□ -0.5
CLSTN3-203ENST00000534830 EXOC6Q8TAG9 804 aa11.93□□□□□ -0.5
CLSTN3-203ENST00000534830 HERVK_113Q902F9 699 aa11.93□□□□□ -0.5
CLSTN3-203ENST00000534830 GMCL1Q96IK5 515 aa11.93□□□□□ -0.5
CLSTN3-203ENST00000534830 GLT1D1Q96MS3 346 aa11.93□□□□□ -0.5
CLSTN3-203ENST00000534830 SYNRGQ9UMZ2 1314 aa11.92□□□□□ -0.5
CLSTN3-203ENST00000534830 MOXD2PA6NHM9 499 aa11.92□□□□□ -0.5
CLSTN3-203ENST00000534830 GPR37L1O60883 481 aa11.92□□□□□ -0.5
CLSTN3-203ENST00000534830 ZBED4O75132 1171 aa11.92□□□□□ -0.5
CLSTN3-203ENST00000534830 FGBP02675 491 aa11.92□□□□□ -0.5
CLSTN3-203ENST00000534830 CYP2C18P33260 490 aa11.92□□□□□ -0.5
CLSTN3-203ENST00000534830 PPP4R3BQ5MIZ7 849 aa11.92□□□□□ -0.5
CLSTN3-203ENST00000534830 OTOP2Q7RTS6 562 aa11.92□□□□□ -0.5
CLSTN3-203ENST00000534830 CHD1LQ86WJ1 897 aa11.92□□□□□ -0.5
CLSTN3-203ENST00000534830 KIFC2Q96AC6 838 aa11.92□□□□□ -0.5
CLSTN3-203ENST00000534830 FGD4Q96M96 766 aa11.92□□□□□ -0.5
CLSTN3-203ENST00000534830 RAVER2Q9HCJ3 691 aaKnown RBP11.92□□□□□ -0.5
CLSTN3-203ENST00000534830 IL23AQ9NPF7 189 aa11.92□□□□□ -0.5
CLSTN3-203ENST00000534830 TCP11L1Q9NUJ3 509 aa11.92□□□□□ -0.5
CLSTN3-203ENST00000534830 CNPY2Q9Y2B0 182 aa11.92□□□□□ -0.5
CLSTN3-203ENST00000534830 ZNF536O15090 1300 aa11.91□□□□□ -0.5
CLSTN3-203ENST00000534830 TSPY2A6NKD2 308 aa11.91□□□□□ -0.5
CLSTN3-203ENST00000534830 TMEM232C9JQI7 657 aa11.91□□□□□ -0.5
CLSTN3-203ENST00000534830 TLR3O15455 904 aaKnown RBP11.91□□□□□ -0.5
CLSTN3-203ENST00000534830 GTPBP6O43824 516 aaPredicted RBP11.91□□□□□ -0.5
CLSTN3-203ENST00000534830 NMT2O60551 498 aa11.91□□□□□ -0.5
CLSTN3-203ENST00000534830 SNAI1O95863 264 aaPredicted RBP11.91□□□□□ -0.5
CLSTN3-203ENST00000534830 MYOGP15173 224 aa11.91□□□□□ -0.5
CLSTN3-203ENST00000534830 STAT2P52630 851 aa11.91□□□□□ -0.5
CLSTN3-203ENST00000534830 NMIQ13287 307 aaPredicted RBP11.91□□□□□ -0.5
CLSTN3-203ENST00000534830 RCSD1Q6JBY9 416 aa11.91□□□□□ -0.5
CLSTN3-203ENST00000534830 ZNF467Q7Z7K2 595 aaPredicted RBP11.91□□□□□ -0.5
CLSTN3-203ENST00000534830 FAM160B2Q86V87 743 aa11.91□□□□□ -0.5
CLSTN3-203ENST00000534830 CPXCR1Q8N123 301 aa11.91□□□□□ -0.5
CLSTN3-203ENST00000534830 KLHDC9Q8NEP7 349 aa11.91□□□□□ -0.5
CLSTN3-203ENST00000534830 CHST13Q8NET6 341 aa11.91□□□□□ -0.5
CLSTN3-203ENST00000534830 STAG1Q8WVM7 1258 aa11.91□□□□□ -0.5
CLSTN3-203ENST00000534830 KHSRPQ92945 711 aaKnown RBP eCLIP11.91□□□□□ -0.5
CLSTN3-203ENST00000534830 C11orf16Q9NQ32 467 aa11.91□□□□□ -0.5
CLSTN3-203ENST00000534830 LCTP09848 1927 aa11.91□□□□□ -0.5
CLSTN3-203ENST00000534830 ELP1O95163 1332 aa11.9□□□□□ -0.5
CLSTN3-203ENST00000534830 CCDC171Q6TFL3 1326 aa11.9□□□□□ -0.5
CLSTN3-203ENST00000534830 MYADML2A6NDP7 307 aa11.9□□□□□ -0.5
CLSTN3-203ENST00000534830 LRRC37A2A6NM11 1700 aa11.9□□□□□ -0.5
CLSTN3-203ENST00000534830 RFXAPO00287 272 aa11.9□□□□□ -0.5
CLSTN3-203ENST00000534830 C6orf222P0C671 652 aaPredicted RBP11.9□□□□□ -0.5
CLSTN3-203ENST00000534830 SDSP20132 328 aa11.9□□□□□ -0.5
CLSTN3-203ENST00000534830 MCCP23508 829 aa11.9□□□□□ -0.5
CLSTN3-203ENST00000534830 SLC1A4P43007 532 aa11.9□□□□□ -0.5
CLSTN3-203ENST00000534830 MRE11P49959 708 aa11.9□□□□□ -0.5
CLSTN3-203ENST00000534830 CDK7P50613 346 aa11.9□□□□□ -0.5
CLSTN3-203ENST00000534830 B4GALNT3Q6L9W6 998 aa11.9□□□□□ -0.5
CLSTN3-203ENST00000534830 CHURC1Q8WUH1 139 aa11.9□□□□□ -0.5
CLSTN3-203ENST00000534830 FBXO40Q9UH90 709 aa11.9□□□□□ -0.5
CLSTN3-203ENST00000534830 FAM184BQ9ULE4 1060 aa11.9□□□□□ -0.5
CLSTN3-203ENST00000534830 COG5Q9UP83 839 aa11.9□□□□□ -0.5
CLSTN3-203ENST00000534830 LAMA4Q16363 1823 aa11.9□□□□□ -0.5
CLSTN3-203ENST00000534830 A0A0U1RQG5 324 aaPredicted RBP11.89□□□□□ -0.51
CLSTN3-203ENST00000534830 TRIM6-TRIM34B2RNG4 842 aa11.89□□□□□ -0.51
CLSTN3-203ENST00000534830 ARVCFO00192 962 aa11.89□□□□□ -0.51
CLSTN3-203ENST00000534830 TLL1O43897 1013 aa11.89□□□□□ -0.51
CLSTN3-203ENST00000534830 RANBP6O60518 1105 aaKnown RBP11.89□□□□□ -0.51
CLSTN3-203ENST00000534830 ASGR1P07306 291 aa11.89□□□□□ -0.51
CLSTN3-203ENST00000534830 IRX5P78411 483 aaPredicted RBP11.89□□□□□ -0.51
CLSTN3-203ENST00000534830 CCSAPQ6IQ19 270 aaPredicted RBP11.89□□□□□ -0.51
CLSTN3-203ENST00000534830 BTNL9Q6UXG8 535 aa11.89□□□□□ -0.51
CLSTN3-203ENST00000534830 KCTD1Q719H9 257 aa11.89□□□□□ -0.51
CLSTN3-203ENST00000534830 RASGRP2Q7LDG7 609 aa11.89□□□□□ -0.51
CLSTN3-203ENST00000534830 FAM126BQ8IXS8 530 aa11.89□□□□□ -0.51
CLSTN3-203ENST00000534830 PCSK9Q8NBP7 692 aaKnown RBP11.89□□□□□ -0.51
CLSTN3-203ENST00000534830 RILPL2Q969X0 211 aa11.89□□□□□ -0.51
CLSTN3-203ENST00000534830 DDX11Q96FC9 970 aa11.89□□□□□ -0.51
CLSTN3-203ENST00000534830 CERS4Q9HA82 394 aa11.89□□□□□ -0.51
CLSTN3-203ENST00000534830 SPC25Q9HBM1 224 aa11.89□□□□□ -0.51
CLSTN3-203ENST00000534830 ZHX1Q9UKY1 873 aaPredicted RBP11.89□□□□□ -0.51
CLSTN3-203ENST00000534830 STX8Q9UNK0 236 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms