RNA–Protein interactions for RNA: ENST00000534389.2

CSDE1-216, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-216ENST00000534389 PCBP3P57721 371 aaKnown RBP3.86□□□□□ -1.79
CSDE1-216ENST00000534389 HMGN5P82970 282 aaKnown RBP3.86□□□□□ -1.79
CSDE1-216ENST00000534389 SSRP1Q08945 709 aaKnown RBP3.86□□□□□ -1.79
CSDE1-216ENST00000534389 RBL2Q08999 1139 aa3.86□□□□□ -1.79
CSDE1-216ENST00000534389 AOC3Q16853 763 aa3.86□□□□□ -1.79
CSDE1-216ENST00000534389 SKOR2Q2VWA4 1001 aaPredicted RBP3.86□□□□□ -1.79
CSDE1-216ENST00000534389 AXDND1Q5T1B0 1012 aaPredicted RBP3.86□□□□□ -1.79
CSDE1-216ENST00000534389 CLEC17AQ6ZS10 378 aa3.86□□□□□ -1.79
CSDE1-216ENST00000534389 TRMT2AQ8IZ69 625 aaKnown RBP3.86□□□□□ -1.79
CSDE1-216ENST00000534389 STK11IPQ8N1F8 1099 aa3.86□□□□□ -1.79
CSDE1-216ENST00000534389 CELF2-AS1Q8N7Q2 184 aa3.86□□□□□ -1.79
CSDE1-216ENST00000534389 NAT16Q8N8M0 369 aa3.86□□□□□ -1.79
CSDE1-216ENST00000534389 DTWD2Q8NBA8 298 aa3.86□□□□□ -1.79
CSDE1-216ENST00000534389 ASB11Q8WXH4 323 aa3.86□□□□□ -1.79
CSDE1-216ENST00000534389 GATA6Q92908 595 aa3.86□□□□□ -1.79
CSDE1-216ENST00000534389 FBXL18Q96ME1 805 aa3.86□□□□□ -1.79
CSDE1-216ENST00000534389 HEXIM2Q96MH2 286 aaKnown RBP3.86□□□□□ -1.79
CSDE1-216ENST00000534389 ZDHHC15Q96MV8 337 aa3.86□□□□□ -1.79
CSDE1-216ENST00000534389 CHST7Q9NS84 486 aa3.86□□□□□ -1.79
CSDE1-216ENST00000534389 RRP7BPQ9NSQ0 103 aa3.86□□□□□ -1.79
CSDE1-216ENST00000534389 WHRNQ9P202 907 aa3.86□□□□□ -1.79
CSDE1-216ENST00000534389 DUSP13Q9UII6 198 aa3.86□□□□□ -1.79
CSDE1-216ENST00000534389 AKT3Q9Y243 479 aa3.86□□□□□ -1.79
CSDE1-216ENST00000534389 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP3.86□□□□□ -1.797e-9■■□□□ 13.3
CSDE1-216ENST00000534389 USP47Q96K76 1375 aa3.86□□□□□ -1.79
CSDE1-216ENST00000534389 IBTKQ9P2D0 1353 aaPredicted RBP3.86□□□□□ -1.79
CSDE1-216ENST00000534389 RPRD2Q5VT52 1461 aaKnown RBP3.86□□□□□ -1.79
CSDE1-216ENST00000534389 KLF4O43474 513 aa3.85□□□□□ -1.79
CSDE1-216ENST00000534389 SUSD5O60279 629 aa3.85□□□□□ -1.79
CSDE1-216ENST00000534389 BCAR3O75815 825 aa3.85□□□□□ -1.79
CSDE1-216ENST00000534389 NOP2P46087 812 aaKnown RBP3.85□□□□□ -1.79
CSDE1-216ENST00000534389 KCNJ6P48051 423 aa3.85□□□□□ -1.79
CSDE1-216ENST00000534389 POU4F1Q01851 419 aa3.85□□□□□ -1.79
CSDE1-216ENST00000534389 GABPB1Q06547 395 aaPredicted RBP3.85□□□□□ -1.79
CSDE1-216ENST00000534389 TNK2Q07912 1038 aa3.85□□□□□ -1.79
CSDE1-216ENST00000534389 SLFN5Q08AF3 891 aa3.85□□□□□ -1.79
CSDE1-216ENST00000534389 ZNF771Q7L3S4 317 aaPredicted RBP3.85□□□□□ -1.79
CSDE1-216ENST00000534389 PPFIBP1Q86W92 1011 aa3.85□□□□□ -1.79
CSDE1-216ENST00000534389 CREG2Q8IUH2 290 aa3.85□□□□□ -1.79
CSDE1-216ENST00000534389 ZDHHC13Q8IUH4 622 aa3.85□□□□□ -1.79
CSDE1-216ENST00000534389 LRRC47Q8N1G4 583 aaKnown RBP3.85□□□□□ -1.79
CSDE1-216ENST00000534389 FIBCD1Q8N539 461 aa3.85□□□□□ -1.79
CSDE1-216ENST00000534389 SNX21Q969T3 373 aa3.85□□□□□ -1.79
CSDE1-216ENST00000534389 HSPA12BQ96MM6 686 aa3.85□□□□□ -1.79
CSDE1-216ENST00000534389 CDC6Q99741 560 aa3.85□□□□□ -1.79
CSDE1-216ENST00000534389 CDADC1Q9BWV3 514 aa3.85□□□□□ -1.79
CSDE1-216ENST00000534389 C22orf23Q9BZE7 217 aa3.85□□□□□ -1.79
CSDE1-216ENST00000534389 PRDM14Q9GZV8 571 aa3.85□□□□□ -1.79
CSDE1-216ENST00000534389 MKNK2Q9HBH9 465 aa3.85□□□□□ -1.79
CSDE1-216ENST00000534389 BSDC1Q9NW68 430 aaPredicted RBP3.85□□□□□ -1.79
CSDE1-216ENST00000534389 SNTG2Q9NY99 539 aa3.85□□□□□ -1.79
CSDE1-216ENST00000534389 FAM53CQ9NYF3 392 aa3.85□□□□□ -1.79
CSDE1-216ENST00000534389 ZC3H7BQ9UGR2 993 aaKnown RBP3.85□□□□□ -1.79
CSDE1-216ENST00000534389 FEZ2Q9UHY8 353 aaPredicted RBP3.85□□□□□ -1.79
CSDE1-216ENST00000534389 ZMYM5Q9UJ78 669 aa3.85□□□□□ -1.79
CSDE1-216ENST00000534389 TNNQ9UQP3 1299 aa3.85□□□□□ -1.79
CSDE1-216ENST00000534389 SLC5A6Q9Y289 635 aa3.85□□□□□ -1.79
CSDE1-216ENST00000534389 TMA7Q9Y2S6 64 aaKnown RBP3.85□□□□□ -1.79
CSDE1-216ENST00000534389 CAPN6Q9Y6Q1 641 aa3.85□□□□□ -1.79
CSDE1-216ENST00000534389 MAPK8IP3Q9UPT6 1336 aa3.85□□□□□ -1.79
CSDE1-216ENST00000534389 KDM5CP41229 1560 aa3.85□□□□□ -1.79
CSDE1-216ENST00000534389 BIVM-ERCC5R4GMW8 1640 aa3.84□□□□□ -1.79
CSDE1-216ENST00000534389 E9PCH4 1651 aa3.84□□□□□ -1.79
CSDE1-216ENST00000534389 LOC102724159A0A0B4J2E5 919 aa3.84□□□□□ -1.79
CSDE1-216ENST00000534389 A0A1W2PQ27 194 aa3.84□□□□□ -1.79
CSDE1-216ENST00000534389 A0A1W2PQ64 194 aa3.84□□□□□ -1.79
CSDE1-216ENST00000534389 A0A1W2PQC6 194 aa3.84□□□□□ -1.79
CSDE1-216ENST00000534389 A0A1W2PQD8 194 aa3.84□□□□□ -1.79
CSDE1-216ENST00000534389 SIGLEC6O43699 453 aa3.84□□□□□ -1.79
CSDE1-216ENST00000534389 FKTNO75072 461 aa3.84□□□□□ -1.79
CSDE1-216ENST00000534389 KCNH1O95259 989 aa3.84□□□□□ -1.79
CSDE1-216ENST00000534389 BAG4O95429 457 aaKnown RBP3.84□□□□□ -1.79
CSDE1-216ENST00000534389 PRAMEF1O95521 474 aa3.84□□□□□ -1.79
CSDE1-216ENST00000534389 CD3EP07766 207 aa3.84□□□□□ -1.79
CSDE1-216ENST00000534389 ZNF865P0CJ78 1059 aaPredicted RBP3.84□□□□□ -1.79
CSDE1-216ENST00000534389 RPL10P27635 214 aaKnown RBP3.84□□□□□ -1.79
CSDE1-216ENST00000534389 ZNF143P52747 638 aaPredicted RBP3.84□□□□□ -1.79
CSDE1-216ENST00000534389 OXCT1P55809 520 aa3.84□□□□□ -1.79
CSDE1-216ENST00000534389 SNW1Q13573 536 aaKnown RBP3.84□□□□□ -1.79
CSDE1-216ENST00000534389 PWP2Q15269 919 aaKnown RBP3.84□□□□□ -1.79
CSDE1-216ENST00000534389 DPY19L1Q2PZI1 675 aa3.84□□□□□ -1.79
CSDE1-216ENST00000534389 KLHL40Q2TBA0 621 aa3.84□□□□□ -1.79
CSDE1-216ENST00000534389 ZSCAN23Q3MJ62 389 aa3.84□□□□□ -1.79
CSDE1-216ENST00000534389 ANGEL2Q5VTE6 544 aaKnown RBP3.84□□□□□ -1.79
CSDE1-216ENST00000534389 EP400NLQ6ZTU2 488 aa3.84□□□□□ -1.79
CSDE1-216ENST00000534389 TMC3Q7Z5M5 1100 aa3.84□□□□□ -1.79
CSDE1-216ENST00000534389 TP53INP2Q8IXH6 220 aa3.84□□□□□ -1.79
CSDE1-216ENST00000534389 PDCL2Q8N4E4 241 aa3.84□□□□□ -1.79
CSDE1-216ENST00000534389 FLCNQ8NFG4 579 aa3.84□□□□□ -1.79
CSDE1-216ENST00000534389 MICAL1Q8TDZ2 1067 aa3.84□□□□□ -1.79
CSDE1-216ENST00000534389 PANK1Q8TE04 598 aa3.84□□□□□ -1.79
CSDE1-216ENST00000534389 MISP3Q96FF7 219 aa3.84□□□□□ -1.79
CSDE1-216ENST00000534389 CHAMP1Q96JM3 812 aa3.84□□□□□ -1.79
CSDE1-216ENST00000534389 TIGD1Q96MW7 591 aa3.84□□□□□ -1.79
CSDE1-216ENST00000534389 DNAJC7Q99615 494 aa3.84□□□□□ -1.79
CSDE1-216ENST00000534389 CCDC113Q9H0I3 377 aa3.84□□□□□ -1.79
CSDE1-216ENST00000534389 EPN3Q9H201 632 aa3.84□□□□□ -1.79
CSDE1-216ENST00000534389 GP6Q9HCN6 339 aa3.84□□□□□ -1.79
CSDE1-216ENST00000534389 LMBRD1Q9NUN5 540 aa3.84□□□□□ -1.79
CSDE1-216ENST00000534389 SPTLC3Q9NUV7 552 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms