RNA–Protein interactions for RNA: ENST00000534356.1

CASP4-213, Transcript of caspase 4, humanhuman

TSL 1 (best)

Gene CASP4, Length 771 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-213ENST00000534356 GDNFP39905 211 aa9.59□□□□□ -0.87
CASP4-213ENST00000534356 ERVFC1P60507 584 aa9.59□□□□□ -0.87
CASP4-213ENST00000534356 GIMAP6Q6P9H5 292 aa9.59□□□□□ -0.87
CASP4-213ENST00000534356 TMEM145Q8NBT3 493 aa9.59□□□□□ -0.87
CASP4-213ENST00000534356 OSBP2Q969R2 916 aa9.59□□□□□ -0.87
CASP4-213ENST00000534356 CCDC120Q96HB5 630 aa9.59□□□□□ -0.87
CASP4-213ENST00000534356 CCDC140Q96MF4 163 aa9.59□□□□□ -0.87
CASP4-213ENST00000534356 KRTAP4-8Q9BYQ9 185 aa9.59□□□□□ -0.87
CASP4-213ENST00000534356 CTNND2Q9UQB3 1225 aa9.59□□□□□ -0.87
CASP4-213ENST00000534356 FADS2P1A8MWK0 482 aa9.58□□□□□ -0.88
CASP4-213ENST00000534356 USP2O75604 605 aaPredicted RBP9.58□□□□□ -0.88
CASP4-213ENST00000534356 PABPC1P11940 636 aaKnown RBP9.58□□□□□ -0.88
CASP4-213ENST00000534356 C2orf27AQ580R0 203 aa9.58□□□□□ -0.88
CASP4-213ENST00000534356 CBLL1Q75N03 491 aa9.58□□□□□ -0.88
CASP4-213ENST00000534356 JAZF1Q86VZ6 243 aa9.58□□□□□ -0.88
CASP4-213ENST00000534356 KSR1Q8IVT5 923 aa9.58□□□□□ -0.88
CASP4-213ENST00000534356 KREMEN2Q8NCW0 462 aa9.58□□□□□ -0.88
CASP4-213ENST00000534356 SH3TC2Q8TF17 1288 aa9.58□□□□□ -0.88
CASP4-213ENST00000534356 FRS2Q8WU20 508 aa9.58□□□□□ -0.88
CASP4-213ENST00000534356 RNPC3Q96LT9 517 aaKnown RBP9.58□□□□□ -0.88
CASP4-213ENST00000534356 CLEC1BQ9P126 229 aa9.58□□□□□ -0.88
CASP4-213ENST00000534356 TNFRSF10DQ9UBN6 386 aa9.58□□□□□ -0.88
CASP4-213ENST00000534356 ADGRE2Q9UHX3 823 aa9.58□□□□□ -0.88
CASP4-213ENST00000534356 PLS3P13797 630 aa9.57□□□□□ -0.88
CASP4-213ENST00000534356 LONRF2Q1L5Z9 754 aa9.57□□□□□ -0.88
CASP4-213ENST00000534356 FAM209AQ5JX71 171 aa9.57□□□□□ -0.88
CASP4-213ENST00000534356 DENND5AQ6IQ26 1287 aa9.57□□□□□ -0.88
CASP4-213ENST00000534356 NSMFQ6X4W1 530 aa9.57□□□□□ -0.88
CASP4-213ENST00000534356 PDZD8Q8NEN9 1154 aa9.57□□□□□ -0.88
CASP4-213ENST00000534356 NPLOC4Q8TAT6 608 aa9.57□□□□□ -0.88
CASP4-213ENST00000534356 C1orf159Q96HA4 380 aa9.57□□□□□ -0.88
CASP4-213ENST00000534356 SP110Q9HB58 689 aa9.57□□□□□ -0.88
CASP4-213ENST00000534356 PTCH2Q9Y6C5 1203 aa9.57□□□□□ -0.88
CASP4-213ENST00000534356 ARNTLO00327 626 aa9.56□□□□□ -0.88
CASP4-213ENST00000534356 CPP00450 1065 aa9.56□□□□□ -0.88
CASP4-213ENST00000534356 HPXP02790 462 aa9.56□□□□□ -0.88
CASP4-213ENST00000534356 L1CAMP32004 1257 aa9.56□□□□□ -0.88
CASP4-213ENST00000534356 KIR2DL1P43626 348 aaPredicted RBP9.56□□□□□ -0.88
CASP4-213ENST00000534356 KIR2DL2P43627 348 aaPredicted RBP9.56□□□□□ -0.88
CASP4-213ENST00000534356 MAP4K2Q12851 820 aa9.56□□□□□ -0.88
CASP4-213ENST00000534356 SLC35F1Q5T1Q4 408 aa9.56□□□□□ -0.88
CASP4-213ENST00000534356 CYP2R1Q6VVX0 501 aa9.56□□□□□ -0.88
CASP4-213ENST00000534356 ANKS4BQ8N8V4 417 aa9.56□□□□□ -0.88
CASP4-213ENST00000534356 KCTD13Q8WZ19 329 aa9.56□□□□□ -0.88
CASP4-213ENST00000534356 EXOC2Q96KP1 924 aa9.56□□□□□ -0.88
CASP4-213ENST00000534356 CDC6Q99741 560 aa9.56□□□□□ -0.88
CASP4-213ENST00000534356 MRPL42Q9Y6G3 142 aaKnown RBP9.56□□□□□ -0.88
CASP4-213ENST00000534356 NOTOA8MTQ0 251 aa9.55□□□□□ -0.88
CASP4-213ENST00000534356 TBC1D8O95759 1140 aa9.55□□□□□ -0.88
CASP4-213ENST00000534356 PAMP19021 973 aa9.55□□□□□ -0.88
CASP4-213ENST00000534356 TRHRP34981 398 aaPredicted RBP9.55□□□□□ -0.88
CASP4-213ENST00000534356 SQSTM1Q13501 440 aa9.55□□□□□ -0.88
CASP4-213ENST00000534356 HLA-DQA1Q5Y7H0 255 aa9.55□□□□□ -0.88
CASP4-213ENST00000534356 CEP128Q6ZU80 1094 aa9.55□□□□□ -0.88
CASP4-213ENST00000534356 CPNE8Q86YQ8 564 aa9.55□□□□□ -0.88
CASP4-213ENST00000534356 SCUBE1Q8IWY4 988 aa9.55□□□□□ -0.88
CASP4-213ENST00000534356 OXR1Q8N573 874 aa9.55□□□□□ -0.88
CASP4-213ENST00000534356 C19orf44Q9H6X5 657 aa9.55□□□□□ -0.88
CASP4-213ENST00000534356 TMEFF2Q9UIK5 374 aaPredicted RBP9.55□□□□□ -0.88
CASP4-213ENST00000534356 TRBV23-1A0A0A0MS06 115 aa9.54□□□□□ -0.88
CASP4-213ENST00000534356 NPHP3-ACAD11A0A0J9YXS1 232 aa9.54□□□□□ -0.88
CASP4-213ENST00000534356 RTP1P59025 263 aa9.54□□□□□ -0.88
CASP4-213ENST00000534356 CHRNEQ04844 493 aa9.54□□□□□ -0.88
CASP4-213ENST00000534356 LAPTM5Q13571 262 aa9.54□□□□□ -0.88
CASP4-213ENST00000534356 TIGD5Q53EQ6 642 aa9.54□□□□□ -0.88
CASP4-213ENST00000534356 SLCO6A1Q86UG4 719 aa9.54□□□□□ -0.88
CASP4-213ENST00000534356 SPPL2CQ8IUH8 684 aa9.54□□□□□ -0.88
CASP4-213ENST00000534356 SLC26A8Q96RN1 970 aa9.54□□□□□ -0.88
CASP4-213ENST00000534356 JMJD8Q96S16 334 aa9.54□□□□□ -0.88
CASP4-213ENST00000534356 TBX22Q9Y458 520 aa9.54□□□□□ -0.88
CASP4-213ENST00000534356 FITM1A5D6W6 292 aa9.53□□□□□ -0.88
CASP4-213ENST00000534356 SLC14A2Q15849 920 aa9.53□□□□□ -0.88
CASP4-213ENST00000534356 MBLAC2Q68D91 279 aa9.53□□□□□ -0.88
CASP4-213ENST00000534356 CCDC103Q8IW40 242 aa9.53□□□□□ -0.88
CASP4-213ENST00000534356 ZSWIM2Q8NEG5 633 aa9.53□□□□□ -0.88
CASP4-213ENST00000534356 FLAD1Q8NFF5 587 aa9.53□□□□□ -0.88
CASP4-213ENST00000534356 KISS1RQ969F8 398 aaPredicted RBP9.53□□□□□ -0.88
CASP4-213ENST00000534356 DHRS4Q9BTZ2 278 aa9.53□□□□□ -0.88
CASP4-213ENST00000534356 A0A1W2PQ45 241 aaPredicted RBP9.52□□□□□ -0.89
CASP4-213ENST00000534356 A0A1W2PQY0 241 aa9.52□□□□□ -0.89
CASP4-213ENST00000534356 BLACEA4D250 179 aa9.52□□□□□ -0.89
CASP4-213ENST00000534356 EFEMP2O95967 443 aa9.52□□□□□ -0.89
CASP4-213ENST00000534356 NR0B2Q15466 257 aa9.52□□□□□ -0.89
CASP4-213ENST00000534356 NTRK3Q16288 839 aa9.52□□□□□ -0.89
CASP4-213ENST00000534356 HSF5Q4G112 596 aaPredicted RBP9.52□□□□□ -0.89
CASP4-213ENST00000534356 TMEM67Q5HYA8 995 aa9.52□□□□□ -0.89
CASP4-213ENST00000534356 ZC3H12BQ5HYM0 836 aaKnown RBP9.52□□□□□ -0.89
CASP4-213ENST00000534356 FYB2Q5VWT5 728 aa9.52□□□□□ -0.89
CASP4-213ENST00000534356 PPIL6Q8IXY8 311 aa9.52□□□□□ -0.89
CASP4-213ENST00000534356 MYLIPQ8WY64 445 aa9.52□□□□□ -0.89
CASP4-213ENST00000534356 IPO9Q96P70 1041 aaKnown RBP9.52□□□□□ -0.89
CASP4-213ENST00000534356 MMP19Q99542 508 aa9.52□□□□□ -0.89
CASP4-213ENST00000534356 MRPS23Q9Y3D9 190 aaKnown RBP9.52□□□□□ -0.89
CASP4-213ENST00000534356 TRBV23OR9-2A0A075B6M9 112 aa9.51□□□□□ -0.89
CASP4-213ENST00000534356 ESYT3A0FGR9 886 aa9.51□□□□□ -0.89
CASP4-213ENST00000534356 TLDC2A0PJX2 215 aa9.51□□□□□ -0.89
CASP4-213ENST00000534356 MEFVO15553 781 aaPredicted RBP9.51□□□□□ -0.89
CASP4-213ENST00000534356 NRDCO43847 1150 aa9.51□□□□□ -0.89
CASP4-213ENST00000534356 PSPNO60542 156 aa9.51□□□□□ -0.89
CASP4-213ENST00000534356 RAC2P15153 192 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms