RNA–Protein interactions for RNA: ENST00000534098.1

TTC39A-218, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 2

Gene TTC39A, Length 930 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-218ENST00000534098 ADAMTS19Q8TE59 1207 aa13.91□□□□□ -0.18
TTC39A-218ENST00000534098 MTIF3Q9H2K0 278 aaKnown RBP13.91□□□□□ -0.18
TTC39A-218ENST00000534098 ZNF287Q9HBT7 754 aa13.91□□□□□ -0.18
TTC39A-218ENST00000534098 A1CFQ9NQ94 594 aaKnown RBP13.91□□□□□ -0.18
TTC39A-218ENST00000534098 ZNF536O15090 1300 aa13.9□□□□□ -0.18
TTC39A-218ENST00000534098 PRRC2BQ5JSZ5 2229 aaKnown RBP13.9□□□□□ -0.18
TTC39A-218ENST00000534098 ASB14A6NK59 587 aa13.9□□□□□ -0.18
TTC39A-218ENST00000534098 TMEM232C9JQI7 657 aa13.9□□□□□ -0.18
TTC39A-218ENST00000534098 IGFBP4P22692 258 aa13.9□□□□□ -0.18
TTC39A-218ENST00000534098 PTGS1P23219 599 aa13.9□□□□□ -0.18
TTC39A-218ENST00000534098 TDO2P48775 406 aa13.9□□□□□ -0.18
TTC39A-218ENST00000534098 ITGA7Q13683 1181 aa13.9□□□□□ -0.18
TTC39A-218ENST00000534098 FSCN1Q16658 493 aaKnown RBP13.9□□□□□ -0.18
TTC39A-218ENST00000534098 NOL8Q76FK4 1167 aaKnown RBP13.9□□□□□ -0.18
TTC39A-218ENST00000534098 OTOP2Q7RTS6 562 aa13.9□□□□□ -0.18
TTC39A-218ENST00000534098 NOC4LQ9BVI4 516 aaKnown RBP13.9□□□□□ -0.18
TTC39A-218ENST00000534098 WNT8AQ9H1J5 351 aa13.9□□□□□ -0.18
TTC39A-218ENST00000534098 SLC28A3Q9HAS3 691 aa13.9□□□□□ -0.18
TTC39A-218ENST00000534098 ECHDC1Q9NTX5 307 aa13.9□□□□□ -0.18
TTC39A-218ENST00000534098 RNF146Q9NTX7 359 aa13.9□□□□□ -0.18
TTC39A-218ENST00000534098 REV3LO60673 3130 aa13.89□□□□□ -0.19
TTC39A-218ENST00000534098 M0R2C6 588 aa13.89□□□□□ -0.19
TTC39A-218ENST00000534098 RNF113AO15541 343 aaKnown RBP13.89□□□□□ -0.19
TTC39A-218ENST00000534098 B4GALT4O60513 344 aa13.89□□□□□ -0.19
TTC39A-218ENST00000534098 SMPD1P17405 629 aa13.89□□□□□ -0.19
TTC39A-218ENST00000534098 GNAT2P19087 354 aa13.89□□□□□ -0.19
TTC39A-218ENST00000534098 STAT2P52630 851 aa13.89□□□□□ -0.19
TTC39A-218ENST00000534098 CCL23P55773 120 aa13.89□□□□□ -0.19
TTC39A-218ENST00000534098 FAM160B2Q86V87 743 aa13.89□□□□□ -0.19
TTC39A-218ENST00000534098 NEDD1Q8NHV4 660 aa13.89□□□□□ -0.19
TTC39A-218ENST00000534098 VWCEQ96DN2 955 aa13.89□□□□□ -0.19
TTC39A-218ENST00000534098 AGBL1Q96MI9 1066 aa13.89□□□□□ -0.19
TTC39A-218ENST00000534098 UHRF1Q96T88 793 aaPredicted RBP13.89□□□□□ -0.19
TTC39A-218ENST00000534098 SEZ6LQ9BYH1 1024 aa13.89□□□□□ -0.19
TTC39A-218ENST00000534098 TRPV6Q9H1D0 765 aa13.89□□□□□ -0.19
TTC39A-218ENST00000534098 CHMP4BQ9H444 224 aaKnown RBP13.89□□□□□ -0.19
TTC39A-218ENST00000534098 RAPGEFL1Q9UHV5 662 aa13.89□□□□□ -0.19
TTC39A-218ENST00000534098 DDX49Q9Y6V7 483 aaKnown RBP13.89□□□□□ -0.19
TTC39A-218ENST00000534098 SCN10AQ9Y5Y9 1956 aa13.89□□□□□ -0.19
TTC39A-218ENST00000534098 TANC1Q9C0D5 1861 aa13.89□□□□□ -0.19
TTC39A-218ENST00000534098 TSPY3P0CV98 308 aa13.88□□□□□ -0.19
TTC39A-218ENST00000534098 TSPY8P0CW00 308 aa13.88□□□□□ -0.19
TTC39A-218ENST00000534098 TKFCQ3LXA3 575 aa13.88□□□□□ -0.19
TTC39A-218ENST00000534098 TAPT1Q6NXT6 567 aa13.88□□□□□ -0.19
TTC39A-218ENST00000534098 IFNL3Q8IZI9 196 aa13.88□□□□□ -0.19
TTC39A-218ENST00000534098 CHURC1Q8WUH1 139 aa13.88□□□□□ -0.19
TTC39A-218ENST00000534098 STAG1Q8WVM7 1258 aa13.88□□□□□ -0.19
TTC39A-218ENST00000534098 GMCL1Q96IK5 515 aa13.88□□□□□ -0.19
TTC39A-218ENST00000534098 TRERF1Q96PN7 1200 aa13.88□□□□□ -0.19
TTC39A-218ENST00000534098 AP5M1Q9H0R1 490 aa13.88□□□□□ -0.19
TTC39A-218ENST00000534098 PDGFCQ9NRA1 345 aa13.88□□□□□ -0.19
TTC39A-218ENST00000534098 TRANK1O15050 2925 aa13.88□□□□□ -0.19
TTC39A-218ENST00000534098 TET1Q8NFU7 2136 aa13.87□□□□□ -0.19
TTC39A-218ENST00000534098 PATL2C9JE40 543 aaKnown RBP13.87□□□□□ -0.19
TTC39A-218ENST00000534098 DYNC1LI2O43237 492 aaPredicted RBP13.87□□□□□ -0.19
TTC39A-218ENST00000534098 ZEB2O60315 1214 aa13.87□□□□□ -0.19
TTC39A-218ENST00000534098 PLA2G6O60733 806 aa13.87□□□□□ -0.19
TTC39A-218ENST00000534098 APPP05067 770 aa13.87□□□□□ -0.19
TTC39A-218ENST00000534098 ZFYP08048 801 aaPredicted RBP13.87□□□□□ -0.19
TTC39A-218ENST00000534098 ALAS1P13196 640 aa13.87□□□□□ -0.19
TTC39A-218ENST00000534098 RABGGTBP53611 331 aa13.87□□□□□ -0.19
TTC39A-218ENST00000534098 PSMC6P62333 389 aa13.87□□□□□ -0.19
TTC39A-218ENST00000534098 TMEM63BQ5T3F8 832 aa13.87□□□□□ -0.19
TTC39A-218ENST00000534098 TSHZ3Q63HK5 1081 aa13.87□□□□□ -0.19
TTC39A-218ENST00000534098 IQSEC1Q6DN90 963 aa13.87□□□□□ -0.19
TTC39A-218ENST00000534098 FBXO16Q8IX29 292 aaPredicted RBP13.87□□□□□ -0.19
TTC39A-218ENST00000534098 ISY1Q9ULR0 285 aaKnown RBP13.87□□□□□ -0.19
TTC39A-218ENST00000534098 Q9Y3F1 56 aa13.87□□□□□ -0.19
TTC39A-218ENST00000534098 SLC4A7Q9Y6M7 1214 aa13.87□□□□□ -0.19
TTC39A-218ENST00000534098 TRIP12Q14669 1992 aaPredicted RBP13.87□□□□□ -0.19
TTC39A-218ENST00000534098 PTPRSQ13332 1948 aa13.86□□□□□ -0.19
TTC39A-218ENST00000534098 MYOGP15173 224 aa13.86□□□□□ -0.19
TTC39A-218ENST00000534098 SLC1A4P43007 532 aa13.86□□□□□ -0.19
TTC39A-218ENST00000534098 TFAP4Q01664 338 aa13.86□□□□□ -0.19
TTC39A-218ENST00000534098 PDE4BQ07343 736 aa13.86□□□□□ -0.19
TTC39A-218ENST00000534098 IKQ13123 557 aaPredicted RBP13.86□□□□□ -0.19
TTC39A-218ENST00000534098 MUM1L1Q5H9M0 696 aa13.86□□□□□ -0.19
TTC39A-218ENST00000534098 PPP2R2DQ66LE6 453 aa13.86□□□□□ -0.19
TTC39A-218ENST00000534098 EEPD1Q7L9B9 569 aa13.86□□□□□ -0.19
TTC39A-218ENST00000534098 RPUSD2Q8IZ73 545 aaKnown RBP13.86□□□□□ -0.19
TTC39A-218ENST00000534098 IL27Q8NEV9 243 aa13.86□□□□□ -0.19
TTC39A-218ENST00000534098 MORC4Q8TE76 937 aa13.86□□□□□ -0.19
TTC39A-218ENST00000534098 SCLYQ96I15 445 aa13.86□□□□□ -0.19
TTC39A-218ENST00000534098 VTA1Q9NP79 307 aa13.86□□□□□ -0.19
TTC39A-218ENST00000534098 CYP39A1Q9NYL5 469 aa13.86□□□□□ -0.19
TTC39A-218ENST00000534098 PCDHA11Q9Y5I1 949 aa13.86□□□□□ -0.19
TTC39A-218ENST00000534098 MCCP23508 829 aa13.85□□□□□ -0.19
TTC39A-218ENST00000534098 SNAP25P60880 206 aa13.85□□□□□ -0.19
TTC39A-218ENST00000534098 PPARAQ07869 468 aa13.85□□□□□ -0.19
TTC39A-218ENST00000534098 KCTD1Q719H9 257 aa13.85□□□□□ -0.19
TTC39A-218ENST00000534098 CHMP4CQ96CF2 233 aa13.85□□□□□ -0.19
TTC39A-218ENST00000534098 GPATCH3Q96I76 525 aa13.85□□□□□ -0.19
TTC39A-218ENST00000534098 SEC62Q99442 399 aaKnown RBP13.85□□□□□ -0.19
TTC39A-218ENST00000534098 NACAP1Q9BZK3 213 aa13.85□□□□□ -0.19
TTC39A-218ENST00000534098 ALDH8A1Q9H2A2 487 aaPredicted RBP13.85□□□□□ -0.19
TTC39A-218ENST00000534098 TSPYL2Q9H2G4 693 aaPredicted RBP13.85□□□□□ -0.19
TTC39A-218ENST00000534098 PRR12Q9ULL5 1215 aa13.85□□□□□ -0.19
TTC39A-218ENST00000534098 ZBBXA8MT70 800 aa13.84□□□□□ -0.19
TTC39A-218ENST00000534098 BMP1P13497 986 aa13.84□□□□□ -0.19
TTC39A-218ENST00000534098 ATP2A2P16615 1042 aaKnown RBP13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms