RNA–Protein interactions for RNA: ENST00000533931.1

CTTN-215, Transcript of cortactin, humanhuman

TSL 3

Gene CTTN, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-215ENST00000533931 SOCS4Q8WXH5 440 aa18■□□□□ 0.47
CTTN-215ENST00000533931 PHKBQ93100 1093 aa18■□□□□ 0.47
CTTN-215ENST00000533931 SLC26A6Q9BXS9 759 aa18■□□□□ 0.47
CTTN-215ENST00000533931 PORCNQ9H237 461 aa18■□□□□ 0.47
CTTN-215ENST00000533931 SH3GLB2Q9NR46 395 aa18■□□□□ 0.47
CTTN-215ENST00000533931 RNF146Q9NTX7 359 aa18■□□□□ 0.47
CTTN-215ENST00000533931 PCDHA1Q9Y5I3 950 aa18■□□□□ 0.47
CTTN-215ENST00000533931 ZNF236Q9UL36 1845 aa18■□□□□ 0.47
CTTN-215ENST00000533931 PFASO15067 1338 aa17.99■□□□□ 0.47
CTTN-215ENST00000533931 ALAS1P13196 640 aa17.99■□□□□ 0.47
CTTN-215ENST00000533931 SNAP25P60880 206 aa17.99■□□□□ 0.47
CTTN-215ENST00000533931 GPR142Q7Z601 462 aa17.99■□□□□ 0.47
CTTN-215ENST00000533931 PLEKHH3Q7Z736 793 aa17.99■□□□□ 0.47
CTTN-215ENST00000533931 NCAPG2Q86XI2 1143 aa17.99■□□□□ 0.47
CTTN-215ENST00000533931 MCF2L2Q86YR7 1114 aa17.99■□□□□ 0.47
CTTN-215ENST00000533931 CCDC83Q8IWF9 413 aa17.99■□□□□ 0.47
CTTN-215ENST00000533931 COA7Q96BR5 231 aa17.99■□□□□ 0.47
CTTN-215ENST00000533931 TRERF1Q96PN7 1200 aa17.99■□□□□ 0.47
CTTN-215ENST00000533931 GLT8D2Q9H1C3 349 aa17.99■□□□□ 0.47
CTTN-215ENST00000533931 BARHL2Q9NY43 387 aa17.99■□□□□ 0.47
CTTN-215ENST00000533931 RIPK3Q9Y572 518 aa17.99■□□□□ 0.47
CTTN-215ENST00000533931 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.99■□□□□ 0.47
CTTN-215ENST00000533931 IVNS1ABPQ9Y6Y0 642 aa17.99■□□□□ 0.47
CTTN-215ENST00000533931 COL11A1P12107 1806 aaPredicted RBP17.99■□□□□ 0.47
CTTN-215ENST00000533931 PCNTO95613 3336 aa17.98■□□□□ 0.47
CTTN-215ENST00000533931 ESYT2A0FGR8 921 aa17.98■□□□□ 0.47
CTTN-215ENST00000533931 PTPDC1A2A3K4 754 aa17.98■□□□□ 0.47
CTTN-215ENST00000533931 SLC15A5A6NIM6 579 aa17.98■□□□□ 0.47
CTTN-215ENST00000533931 TNPO2O14787 897 aaKnown RBP17.98■□□□□ 0.47
CTTN-215ENST00000533931 FCER1AP12319 257 aa17.98■□□□□ 0.47
CTTN-215ENST00000533931 PTPREP23469 700 aa17.98■□□□□ 0.47
CTTN-215ENST00000533931 HOXD10P28358 340 aa17.98■□□□□ 0.47
CTTN-215ENST00000533931 PSMC4P43686 418 aa17.98■□□□□ 0.47
CTTN-215ENST00000533931 GRB14Q14449 540 aa17.98■□□□□ 0.47
CTTN-215ENST00000533931 KCTD2Q14681 263 aa17.98■□□□□ 0.47
CTTN-215ENST00000533931 PKN1Q16512 942 aa17.98■□□□□ 0.47
CTTN-215ENST00000533931 CLEC4DQ8WXI8 215 aa17.98■□□□□ 0.47
CTTN-215ENST00000533931 INTS4Q96HW7 963 aaKnown RBP17.98■□□□□ 0.47
CTTN-215ENST00000533931 EFCC1Q9HA90 598 aa17.98■□□□□ 0.47
CTTN-215ENST00000533931 CWC22Q9HCG8 908 aaKnown RBP17.98■□□□□ 0.47
CTTN-215ENST00000533931 KIF3AQ9Y496 699 aa17.98■□□□□ 0.47
CTTN-215ENST00000533931 PEX10O60683 326 aa17.97■□□□□ 0.47
CTTN-215ENST00000533931 USH1GQ495M9 461 aa17.97■□□□□ 0.47
CTTN-215ENST00000533931 WWC2Q6AWC2 1192 aa17.97■□□□□ 0.47
CTTN-215ENST00000533931 CCDC148Q8NFR7 591 aa17.97■□□□□ 0.47
CTTN-215ENST00000533931 TRIM47Q96LD4 638 aa17.97■□□□□ 0.47
CTTN-215ENST00000533931 ORC3Q9UBD5 711 aaPredicted RBP17.97■□□□□ 0.47
CTTN-215ENST00000533931 LOC102724159A0A0B4J2E5 919 aa17.96■□□□□ 0.47
CTTN-215ENST00000533931 STXBP3O00186 592 aa17.96■□□□□ 0.47
CTTN-215ENST00000533931 HOXC6P09630 235 aa17.96■□□□□ 0.47
CTTN-215ENST00000533931 XBP1P17861 261 aa17.96■□□□□ 0.47
CTTN-215ENST00000533931 PWP2Q15269 919 aaKnown RBP17.96■□□□□ 0.47
CTTN-215ENST00000533931 MORN1Q5T089 497 aa17.96■□□□□ 0.47
CTTN-215ENST00000533931 HEATR3Q7Z4Q2 680 aa17.96■□□□□ 0.47
CTTN-215ENST00000533931 CD99L2Q8TCZ2 262 aa17.96■□□□□ 0.47
CTTN-215ENST00000533931 MMP19Q99542 508 aa17.96■□□□□ 0.47
CTTN-215ENST00000533931 PRDM10Q9NQV6 1147 aa17.96■□□□□ 0.47
CTTN-215ENST00000533931 SLC5A4Q9NY91 659 aa17.96■□□□□ 0.47
CTTN-215ENST00000533931 TSKSQ9UJT2 592 aa17.96■□□□□ 0.47
CTTN-215ENST00000533931 DIS3Q9Y2L1 958 aaKnown RBP17.96■□□□□ 0.47
CTTN-215ENST00000533931 DNAJC25-GNG10A0A024R161 153 aa17.95■□□□□ 0.46
CTTN-215ENST00000533931 PIK3CDO00329 1044 aa17.95■□□□□ 0.46
CTTN-215ENST00000533931 XRCC5P13010 732 aaKnown RBP17.95■□□□□ 0.46
CTTN-215ENST00000533931 IRF5Q13568 498 aa17.95■□□□□ 0.46
CTTN-215ENST00000533931 MUM1L1Q5H9M0 696 aa17.95■□□□□ 0.46
CTTN-215ENST00000533931 MCTP2Q6DN12 878 aa17.95■□□□□ 0.46
CTTN-215ENST00000533931 GALNT17Q6IS24 598 aa17.95■□□□□ 0.46
CTTN-215ENST00000533931 PIBF1Q8WXW3 757 aa17.95■□□□□ 0.46
CTTN-215ENST00000533931 USP6NLQ92738 828 aa17.95■□□□□ 0.46
CTTN-215ENST00000533931 NUDT12Q9BQG2 462 aa17.95■□□□□ 0.46
CTTN-215ENST00000533931 A1CFQ9NQ94 594 aaKnown RBP17.95■□□□□ 0.46
CTTN-215ENST00000533931 HOMER2Q9NSB8 354 aa17.95■□□□□ 0.46
CTTN-215ENST00000533931 hCG_1642624A0A1W2PR95 340 aa17.94■□□□□ 0.46
CTTN-215ENST00000533931 NFIBO00712 420 aa17.94■□□□□ 0.46
CTTN-215ENST00000533931 OPLAHO14841 1288 aa17.94■□□□□ 0.46
CTTN-215ENST00000533931 FDPSP14324 419 aaKnown RBP17.94■□□□□ 0.46
CTTN-215ENST00000533931 CTGFP29279 349 aa17.94■□□□□ 0.46
CTTN-215ENST00000533931 HSD17B4P51659 736 aa17.94■□□□□ 0.46
CTTN-215ENST00000533931 MRPL12P52815 198 aaKnown RBP17.94■□□□□ 0.46
CTTN-215ENST00000533931 LBX1P52954 281 aa17.94■□□□□ 0.46
CTTN-215ENST00000533931 NAPAP54920 295 aa17.94■□□□□ 0.46
CTTN-215ENST00000533931 BECN1Q14457 450 aa17.94■□□□□ 0.46
CTTN-215ENST00000533931 WDR78Q5VTH9 848 aa17.94■□□□□ 0.46
CTTN-215ENST00000533931 RNF207Q6ZRF8 634 aa17.94■□□□□ 0.46
CTTN-215ENST00000533931 ANKRD35Q8N283 1001 aa17.94■□□□□ 0.46
CTTN-215ENST00000533931 ZMYND12Q9H0C1 365 aa17.94■□□□□ 0.46
CTTN-215ENST00000533931 CYP39A1Q9NYL5 469 aa17.94■□□□□ 0.46
CTTN-215ENST00000533931 SRRDQ9UH36 339 aa17.94■□□□□ 0.46
CTTN-215ENST00000533931 GJD2Q9UKL4 321 aa17.94■□□□□ 0.46
CTTN-215ENST00000533931 JAK2O60674 1132 aa17.93■□□□□ 0.46
CTTN-215ENST00000533931 CALML3P27482 149 aa17.93■□□□□ 0.46
CTTN-215ENST00000533931 ADORA2AP29274 412 aa17.93■□□□□ 0.46
CTTN-215ENST00000533931 GNA11P29992 359 aa17.93■□□□□ 0.46
CTTN-215ENST00000533931 RGS2P41220 211 aa17.93■□□□□ 0.46
CTTN-215ENST00000533931 SLC4A3P48751 1232 aa17.93■□□□□ 0.46
CTTN-215ENST00000533931 MAP2K5Q13163 448 aa17.93■□□□□ 0.46
CTTN-215ENST00000533931 ZNF467Q7Z7K2 595 aaPredicted RBP17.93■□□□□ 0.46
CTTN-215ENST00000533931 TRMT44Q8IYL2 757 aaKnown RBP17.93■□□□□ 0.46
CTTN-215ENST00000533931 BICD2Q8TD16 824 aa17.93■□□□□ 0.46
CTTN-215ENST00000533931 GPKOWQ92917 476 aaPredicted RBP eCLIP17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms