RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 ORC4O43929 436 aa21.61■■□□□ 1.05
CAPN1-226ENST00000533820 MTIF2P46199 727 aaKnown RBP21.61■■□□□ 1.05
CAPN1-226ENST00000533820 STIM1Q13586 685 aa21.61■■□□□ 1.05
CAPN1-226ENST00000533820 DIXDC1Q155Q3 683 aa21.61■■□□□ 1.05
CAPN1-226ENST00000533820 CWC15Q9P013 229 aaKnown RBP21.61■■□□□ 1.05
CAPN1-226ENST00000533820 PLEKP08567 350 aaPredicted RBP21.61■■□□□ 1.05
CAPN1-226ENST00000533820 FGRP09769 529 aa21.61■■□□□ 1.05
CAPN1-226ENST00000533820 ASIC1P78348 528 aa21.61■■□□□ 1.05
CAPN1-226ENST00000533820 PDE4DQ08499 809 aa21.61■■□□□ 1.05
CAPN1-226ENST00000533820 FKBP15Q5T1M5 1219 aa21.61■■□□□ 1.05
CAPN1-226ENST00000533820 PCDHA6Q9UN73 950 aa21.61■■□□□ 1.05
CAPN1-226ENST00000533820 PCDHA8Q9Y5H6 950 aa21.61■■□□□ 1.05
CAPN1-226ENST00000533820 BCL9LQ86UU0 1499 aa21.61■■□□□ 1.05
CAPN1-226ENST00000533820 PLCG1P19174 1290 aa21.61■■□□□ 1.05
CAPN1-226ENST00000533820 STK4Q13043 487 aa21.61■■□□□ 1.05
CAPN1-226ENST00000533820 LEKR1Q6ZMV7 388 aa21.61■■□□□ 1.05
CAPN1-226ENST00000533820 ZNF652Q9Y2D9 606 aa21.61■■□□□ 1.05
CAPN1-226ENST00000533820 CYTH3O43739 400 aa21.6■■□□□ 1.05
CAPN1-226ENST00000533820 KLRC4O43908 158 aa21.6■■□□□ 1.05
CAPN1-226ENST00000533820 MATR3P43243 847 aaKnown RBP eCLIP21.6■■□□□ 1.054e-6■□□□□ 9.5
CAPN1-226ENST00000533820 SUFUQ9UMX1 484 aa21.6■■□□□ 1.05
CAPN1-226ENST00000533820 CACNA1SQ13698 1873 aa21.6■■□□□ 1.05
CAPN1-226ENST00000533820 ARL6IP4Q66PJ3 421 aaKnown RBP21.6■■□□□ 1.05
CAPN1-226ENST00000533820 ANKRD40Q6AI12 368 aa21.6■■□□□ 1.05
CAPN1-226ENST00000533820 GPR101Q96P66 508 aaPredicted RBP21.6■■□□□ 1.05
CAPN1-226ENST00000533820 TXNRD1Q16881 649 aa21.59■■□□□ 1.05
CAPN1-226ENST00000533820 TRAPPC11Q7Z392 1133 aa21.59■■□□□ 1.05
CAPN1-226ENST00000533820 MARCH10Q8NA82 808 aaPredicted RBP21.59■■□□□ 1.05
CAPN1-226ENST00000533820 HAUS4Q9H6D7 363 aa21.59■■□□□ 1.05
CAPN1-226ENST00000533820 FAM204AQ9H8W3 233 aa21.59■■□□□ 1.05
CAPN1-226ENST00000533820 XIRP1Q702N8 1843 aaKnown RBP21.59■■□□□ 1.05
CAPN1-226ENST00000533820 CCNT1O60563 726 aaKnown RBP21.59■■□□□ 1.05
CAPN1-226ENST00000533820 IPO7O95373 1038 aaKnown RBP21.59■■□□□ 1.05
CAPN1-226ENST00000533820 ACTN2P35609 894 aa21.59■■□□□ 1.05
CAPN1-226ENST00000533820 RPS8P62241 208 aaKnown RBP21.59■■□□□ 1.05
CAPN1-226ENST00000533820 ATP2B2Q01814 1243 aa21.59■■□□□ 1.05
CAPN1-226ENST00000533820 TUBB2AQ13885 445 aa21.59■■□□□ 1.05
CAPN1-226ENST00000533820 ZNF507Q8TCN5 953 aa21.59■■□□□ 1.05
CAPN1-226ENST00000533820 DUSP9Q99956 384 aaKnown RBP21.59■■□□□ 1.05
CAPN1-226ENST00000533820 TUBB2BQ9BVA1 445 aa21.59■■□□□ 1.05
CAPN1-226ENST00000533820 NHEJ1Q9H9Q4 299 aaPredicted RBP21.59■■□□□ 1.05
CAPN1-226ENST00000533820 MYO1AQ9UBC5 1043 aa21.59■■□□□ 1.05
CAPN1-226ENST00000533820 PLCH1Q4KWH8 1693 aa21.59■■□□□ 1.05
CAPN1-226ENST00000533820 MYH14Q7Z406 1995 aaKnown RBP21.59■■□□□ 1.05
CAPN1-226ENST00000533820 TSPY3P0CV98 308 aa21.59■■□□□ 1.05
CAPN1-226ENST00000533820 TSPY8P0CW00 308 aa21.59■■□□□ 1.05
CAPN1-226ENST00000533820 TECP42680 631 aa21.59■■□□□ 1.05
CAPN1-226ENST00000533820 TTI2Q6NXR4 508 aa21.59■■□□□ 1.05
CAPN1-226ENST00000533820 FBXO33Q7Z6M2 555 aa21.59■■□□□ 1.05
CAPN1-226ENST00000533820 CNOT6LQ96LI5 555 aaKnown RBP21.59■■□□□ 1.05
CAPN1-226ENST00000533820 UIMC1Q96RL1 719 aa21.59■■□□□ 1.05
CAPN1-226ENST00000533820 PYM1Q9BRP8 204 aaKnown RBP21.59■■□□□ 1.05
CAPN1-226ENST00000533820 ZNHIT6Q9NWK9 470 aaKnown RBP21.59■■□□□ 1.05
CAPN1-226ENST00000533820 CAPN11Q9UMQ6 739 aa21.59■■□□□ 1.05
CAPN1-226ENST00000533820 PDE2AO00408 941 aaPredicted RBP21.58■■□□□ 1.05
CAPN1-226ENST00000533820 IDEP14735 1019 aa21.58■■□□□ 1.05
CAPN1-226ENST00000533820 C2orf54Q08AI8 447 aa21.58■■□□□ 1.05
CAPN1-226ENST00000533820 TBC1D9BQ66K14 1250 aa21.58■■□□□ 1.05
CAPN1-226ENST00000533820 DNAJC7Q99615 494 aa21.58■■□□□ 1.05
CAPN1-226ENST00000533820 SLC39A2Q9NP94 309 aa21.58■■□□□ 1.05
CAPN1-226ENST00000533820 ATP8A2Q9NTI2 1148 aa21.58■■□□□ 1.05
CAPN1-226ENST00000533820 EXOC1Q9NV70 894 aa21.58■■□□□ 1.05
CAPN1-226ENST00000533820 MYBL2P10244 700 aa21.58■■□□□ 1.04
CAPN1-226ENST00000533820 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.58■■□□□ 1.04
CAPN1-226ENST00000533820 CABP7Q86V35 215 aa21.58■■□□□ 1.04
CAPN1-226ENST00000533820 SH3RF3Q8TEJ3 882 aaPredicted RBP21.58■■□□□ 1.04
CAPN1-226ENST00000533820 NOC4LQ9BVI4 516 aaKnown RBP21.58■■□□□ 1.04
CAPN1-226ENST00000533820 GBP3Q9H0R5 595 aa21.58■■□□□ 1.04
CAPN1-226ENST00000533820 FAM207AQ9NSI2 230 aaPredicted RBP21.58■■□□□ 1.04
CAPN1-226ENST00000533820 ARPP21Q9UBL0 812 aaPredicted RBP21.58■■□□□ 1.04
CAPN1-226ENST00000533820 SRP68Q9UHB9 627 aaKnown RBP21.58■■□□□ 1.04
CAPN1-226ENST00000533820 GOLGA5Q8TBA6 731 aa21.57■■□□□ 1.04
CAPN1-226ENST00000533820 TGFBRAP1Q8WUH2 860 aa21.57■■□□□ 1.04
CAPN1-226ENST00000533820 SMARCAL1Q9NZC9 954 aa21.57■■□□□ 1.04
CAPN1-226ENST00000533820 RASSF10A6NK89 507 aa21.57■■□□□ 1.04
CAPN1-226ENST00000533820 DISP2A7MBM2 1401 aa21.57■■□□□ 1.04
CAPN1-226ENST00000533820 USP14P54578 494 aa21.57■■□□□ 1.04
CAPN1-226ENST00000533820 GRIK5Q16478 980 aa21.57■■□□□ 1.04
CAPN1-226ENST00000533820 ANKRD13CQ8N6S4 541 aa21.57■■□□□ 1.04
CAPN1-226ENST00000533820 RABEP2Q9H5N1 569 aa21.57■■□□□ 1.04
CAPN1-226ENST00000533820 MAD2L2Q9UI95 211 aa21.57■■□□□ 1.04
CAPN1-226ENST00000533820 PDS5AQ29RF7 1337 aaKnown RBP21.57■■□□□ 1.04
CAPN1-226ENST00000533820 KRT86O43790 486 aa21.57■■□□□ 1.04
CAPN1-226ENST00000533820 EEF1GP26641 437 aaKnown RBP21.57■■□□□ 1.04
CAPN1-226ENST00000533820 CXCR5P32302 372 aa21.57■■□□□ 1.04
CAPN1-226ENST00000533820 DNM2P50570 870 aa21.57■■□□□ 1.04
CAPN1-226ENST00000533820 CCDC96Q2M329 555 aa21.57■■□□□ 1.04
CAPN1-226ENST00000533820 MAPKAPK5Q8IW41 473 aa21.57■■□□□ 1.04
CAPN1-226ENST00000533820 LRWD1Q9UFC0 647 aa21.57■■□□□ 1.04
CAPN1-226ENST00000533820 PSMD14O00487 310 aa21.56■■□□□ 1.04
CAPN1-226ENST00000533820 RNF40O75150 1001 aa21.56■■□□□ 1.04
CAPN1-226ENST00000533820 PCP11498 1178 aaKnown RBP21.56■■□□□ 1.04
CAPN1-226ENST00000533820 NAPAP54920 295 aa21.56■■□□□ 1.04
CAPN1-226ENST00000533820 GIMAP8Q8ND71 665 aaPredicted RBP21.56■■□□□ 1.04
CAPN1-226ENST00000533820 TCP11L1Q9NUJ3 509 aa21.56■■□□□ 1.04
CAPN1-226ENST00000533820 DNA2P51530 1060 aa21.56■■□□□ 1.04
CAPN1-226ENST00000533820 DYMQ7RTS9 669 aa21.56■■□□□ 1.04
CAPN1-226ENST00000533820 DONSONQ9NYP3 566 aa21.56■■□□□ 1.04
CAPN1-226ENST00000533820 FAM43BQ6ZT52 329 aaPredicted RBP21.55■■□□□ 1.04
CAPN1-226ENST00000533820 ZNF444Q8N0Y2 327 aaPredicted RBP21.55■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms