RNA–Protein interactions for RNA: ENST00000533562.1

CAPRIN1-213, Transcript of cell cycle associated protein 1, humanhuman

TSL 2

Gene CAPRIN1, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-213ENST00000533562 TOX2Q96NM4 488 aa14.6□□□□□ -0.07
CAPRIN1-213ENST00000533562 RANBP17Q9H2T7 1088 aaKnown RBP14.6□□□□□ -0.07
CAPRIN1-213ENST00000533562 GPCPD1Q9NPB8 672 aa14.6□□□□□ -0.07
CAPRIN1-213ENST00000533562 PDLIM7Q9NR12 457 aa14.6□□□□□ -0.07
CAPRIN1-213ENST00000533562 CYP39A1Q9NYL5 469 aa14.6□□□□□ -0.07
CAPRIN1-213ENST00000533562 SUPT16HQ9Y5B9 1047 aaKnown RBP14.6□□□□□ -0.07
CAPRIN1-213ENST00000533562 ELP1O95163 1332 aa14.6□□□□□ -0.07
CAPRIN1-213ENST00000533562 TRIM43BA6NCK2 446 aa14.59□□□□□ -0.07
CAPRIN1-213ENST00000533562 SOWAHBA6NEL2 793 aa14.59□□□□□ -0.07
CAPRIN1-213ENST00000533562 DCDC2CA8MYV0 355 aa14.59□□□□□ -0.07
CAPRIN1-213ENST00000533562 PQBP1O60828 265 aaKnown RBP14.59□□□□□ -0.07
CAPRIN1-213ENST00000533562 CST5P28325 142 aaPredicted RBP14.59□□□□□ -0.07
CAPRIN1-213ENST00000533562 GJA9P57773 515 aa14.59□□□□□ -0.07
CAPRIN1-213ENST00000533562 TNFAIP2Q03169 654 aa14.59□□□□□ -0.07
CAPRIN1-213ENST00000533562 MUM1L1Q5H9M0 696 aa14.59□□□□□ -0.07
CAPRIN1-213ENST00000533562 CCSAPQ6IQ19 270 aaPredicted RBP14.59□□□□□ -0.07
CAPRIN1-213ENST00000533562 NOL8Q76FK4 1167 aaKnown RBP14.59□□□□□ -0.07
CAPRIN1-213ENST00000533562 RASGRP2Q7LDG7 609 aa14.59□□□□□ -0.07
CAPRIN1-213ENST00000533562 ANKRD33Q7Z3H0 272 aa14.59□□□□□ -0.07
CAPRIN1-213ENST00000533562 SH3RF1Q7Z6J0 888 aa14.59□□□□□ -0.07
CAPRIN1-213ENST00000533562 IQCA1Q86XH1 822 aa14.59□□□□□ -0.07
CAPRIN1-213ENST00000533562 DGKHQ86XP1 1220 aa14.59□□□□□ -0.07
CAPRIN1-213ENST00000533562 TRIM43Q96BQ3 446 aaPredicted RBP14.59□□□□□ -0.07
CAPRIN1-213ENST00000533562 TMEM39AQ9NV64 488 aa14.59□□□□□ -0.07
CAPRIN1-213ENST00000533562 CTNNA3Q9UI47 895 aa14.59□□□□□ -0.07
CAPRIN1-213ENST00000533562 FRMPD2Q68DX3 1309 aaPredicted RBP14.59□□□□□ -0.07
CAPRIN1-213ENST00000533562 ASGR1P07306 291 aa14.58□□□□□ -0.08
CAPRIN1-213ENST00000533562 PDHBP11177 359 aa14.58□□□□□ -0.08
CAPRIN1-213ENST00000533562 RAG1P15918 1043 aa14.58□□□□□ -0.08
CAPRIN1-213ENST00000533562 NSMFQ6X4W1 530 aa14.58□□□□□ -0.08
CAPRIN1-213ENST00000533562 TBC1D10CQ8IV04 446 aa14.58□□□□□ -0.08
CAPRIN1-213ENST00000533562 DSCC1Q9BVC3 393 aa14.58□□□□□ -0.08
CAPRIN1-213ENST00000533562 KATNBL1Q9H079 304 aa14.58□□□□□ -0.08
CAPRIN1-213ENST00000533562 UPF3AQ9H1J1 476 aaKnown RBP14.58□□□□□ -0.08
CAPRIN1-213ENST00000533562 ADD3Q9UEY8 706 aaKnown RBP14.58□□□□□ -0.08
CAPRIN1-213ENST00000533562 MCM3APO60318 1980 aa14.57□□□□□ -0.08
CAPRIN1-213ENST00000533562 KIAA0355O15063 1070 aa14.57□□□□□ -0.08
CAPRIN1-213ENST00000533562 ZNF543Q08ER8 600 aa14.57□□□□□ -0.08
CAPRIN1-213ENST00000533562 IMMTQ16891 758 aaKnown RBP14.57□□□□□ -0.08
CAPRIN1-213ENST00000533562 GPATCH4Q5T3I0 446 aaKnown RBP14.57□□□□□ -0.08
CAPRIN1-213ENST00000533562 IQSEC1Q6DN90 963 aa14.57□□□□□ -0.08
CAPRIN1-213ENST00000533562 AP5M1Q9H0R1 490 aa14.57□□□□□ -0.08
CAPRIN1-213ENST00000533562 MROH7Q68CQ1 1323 aa14.57□□□□□ -0.08
CAPRIN1-213ENST00000533562 LOC102724159A0A0B4J2E5 919 aa14.56□□□□□ -0.08
CAPRIN1-213ENST00000533562 MYADML2A6NDP7 307 aa14.56□□□□□ -0.08
CAPRIN1-213ENST00000533562 ADCY6O43306 1168 aa14.56□□□□□ -0.08
CAPRIN1-213ENST00000533562 ZEB2O60315 1214 aa14.56□□□□□ -0.08
CAPRIN1-213ENST00000533562 KDM4AO75164 1064 aa14.56□□□□□ -0.08
CAPRIN1-213ENST00000533562 SNHG28P0DPA3 235 aa14.56□□□□□ -0.08
CAPRIN1-213ENST00000533562 HOXD11P31277 338 aaPredicted RBP14.56□□□□□ -0.08
CAPRIN1-213ENST00000533562 NKX3-2P78367 333 aa14.56□□□□□ -0.08
CAPRIN1-213ENST00000533562 FAAP100Q0VG06 881 aa14.56□□□□□ -0.08
CAPRIN1-213ENST00000533562 BAATQ14032 418 aaPredicted RBP14.56□□□□□ -0.08
CAPRIN1-213ENST00000533562 PWP2Q15269 919 aaKnown RBP14.56□□□□□ -0.08
CAPRIN1-213ENST00000533562 SHHQ15465 462 aa14.56□□□□□ -0.08
CAPRIN1-213ENST00000533562 Q7L0L9 218 aa14.56□□□□□ -0.08
CAPRIN1-213ENST00000533562 ZKSCAN3Q9BRR0 538 aa14.56□□□□□ -0.08
CAPRIN1-213ENST00000533562 KAT14Q9H8E8 782 aa14.56□□□□□ -0.08
CAPRIN1-213ENST00000533562 Q9Y3F1 56 aa14.56□□□□□ -0.08
CAPRIN1-213ENST00000533562 A0A0U1RQG5 324 aaPredicted RBP14.55□□□□□ -0.08
CAPRIN1-213ENST00000533562 PTPDC1A2A3K4 754 aa14.55□□□□□ -0.08
CAPRIN1-213ENST00000533562 ARVCFO00192 962 aa14.55□□□□□ -0.08
CAPRIN1-213ENST00000533562 DYNC1LI2O43237 492 aaPredicted RBP14.55□□□□□ -0.08
CAPRIN1-213ENST00000533562 CABYRO75952 493 aa14.55□□□□□ -0.08
CAPRIN1-213ENST00000533562 CDK7P50613 346 aa14.55□□□□□ -0.08
CAPRIN1-213ENST00000533562 FAM109BQ6ICB4 259 aaPredicted RBP14.55□□□□□ -0.08
CAPRIN1-213ENST00000533562 EEPD1Q7L9B9 569 aa14.55□□□□□ -0.08
CAPRIN1-213ENST00000533562 MORC4Q8TE76 937 aa14.55□□□□□ -0.08
CAPRIN1-213ENST00000533562 ANKS1AQ92625 1134 aa14.55□□□□□ -0.08
CAPRIN1-213ENST00000533562 ZSCAN10Q96SZ4 725 aaPredicted RBP14.55□□□□□ -0.08
CAPRIN1-213ENST00000533562 MPHOSPH6Q99547 160 aaKnown RBP14.55□□□□□ -0.08
CAPRIN1-213ENST00000533562 KRT23Q9C075 422 aa14.55□□□□□ -0.08
CAPRIN1-213ENST00000533562 CNNM2Q9H8M5 875 aa14.55□□□□□ -0.08
CAPRIN1-213ENST00000533562 VTA1Q9NP79 307 aa14.55□□□□□ -0.08
CAPRIN1-213ENST00000533562 MTMR10Q9NXD2 777 aa14.55□□□□□ -0.08
CAPRIN1-213ENST00000533562 ZSWIM5Q9P217 1185 aa14.55□□□□□ -0.08
CAPRIN1-213ENST00000533562 GNEQ9Y223 722 aaKnown RBP14.55□□□□□ -0.08
CAPRIN1-213ENST00000533562 NEDD4P46934 1319 aa14.55□□□□□ -0.08
CAPRIN1-213ENST00000533562 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.54□□□□□ -0.08
CAPRIN1-213ENST00000533562 NFIBO00712 420 aa14.54□□□□□ -0.08
CAPRIN1-213ENST00000533562 TIMP1P01033 207 aa14.54□□□□□ -0.08
CAPRIN1-213ENST00000533562 SMPD1P17405 629 aa14.54□□□□□ -0.08
CAPRIN1-213ENST00000533562 ITGB8P26012 769 aa14.54□□□□□ -0.08
CAPRIN1-213ENST00000533562 IRX5P78411 483 aaPredicted RBP14.54□□□□□ -0.08
CAPRIN1-213ENST00000533562 FSCN1Q16658 493 aaKnown RBP14.54□□□□□ -0.08
CAPRIN1-213ENST00000533562 C9orf50Q5SZB4 431 aa14.54□□□□□ -0.08
CAPRIN1-213ENST00000533562 TAPT1Q6NXT6 567 aa14.54□□□□□ -0.08
CAPRIN1-213ENST00000533562 RNF207Q6ZRF8 634 aa14.54□□□□□ -0.08
CAPRIN1-213ENST00000533562 KIAA1211Q6ZU35 1233 aa14.54□□□□□ -0.08
CAPRIN1-213ENST00000533562 TLK2Q86UE8 772 aa14.54□□□□□ -0.08
CAPRIN1-213ENST00000533562 PNMA1Q8ND90 353 aa14.54□□□□□ -0.08
CAPRIN1-213ENST00000533562 SEZ6LQ9BYH1 1024 aa14.54□□□□□ -0.08
CAPRIN1-213ENST00000533562 ASTN1O14525 1302 aa14.54□□□□□ -0.08
CAPRIN1-213ENST00000533562 WDR19Q8NEZ3 1342 aa14.54□□□□□ -0.08
CAPRIN1-213ENST00000533562 B4DLN1 442 aa14.53□□□□□ -0.08
CAPRIN1-213ENST00000533562 B4E1Z4 1266 aa14.53□□□□□ -0.08
CAPRIN1-213ENST00000533562 CTAGE5O15320 804 aa14.53□□□□□ -0.08
CAPRIN1-213ENST00000533562 TLR3O15455 904 aaKnown RBP14.53□□□□□ -0.08
CAPRIN1-213ENST00000533562 GOLGA8HP0CJ92 632 aa14.53□□□□□ -0.08
CAPRIN1-213ENST00000533562 CALML3P27482 149 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms