RNA–Protein interactions for RNA: ENST00000533482.5

RAD50-209, Transcript of RAD50 double strand break repair protein, humanhuman

TSL 1 (best)

Gene RAD50, Length 4,373 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD50-209ENST00000533482 DHX40Q8IX18 779 aaKnown RBP13.76□□□□□ -0.21
RAD50-209ENST00000533482 CNOT6LQ96LI5 555 aaKnown RBP13.76□□□□□ -0.21
RAD50-209ENST00000533482 PAGR1Q9BTK6 254 aa13.76□□□□□ -0.21
RAD50-209ENST00000533482 TMOD4Q9NZQ9 345 aa13.76□□□□□ -0.21
RAD50-209ENST00000533482 ARHGEF28Q8N1W1 1705 aaKnown RBP13.76□□□□□ -0.21
RAD50-209ENST00000533482 CYP27A1Q02318 531 aa13.76□□□□□ -0.21
RAD50-209ENST00000533482 CUL4BQ13620 913 aa13.76□□□□□ -0.21
RAD50-209ENST00000533482 ASIC2Q16515 512 aa13.76□□□□□ -0.21
RAD50-209ENST00000533482 TMTC3Q6ZXV5 915 aa13.76□□□□□ -0.21
RAD50-209ENST00000533482 C10orf67Q8IYJ2 551 aa13.76□□□□□ -0.21
RAD50-209ENST00000533482 GPR161Q8N6U8 529 aaKnown RBP13.76□□□□□ -0.21
RAD50-209ENST00000533482 CHURC1Q8WUH1 139 aa13.76□□□□□ -0.21
RAD50-209ENST00000533482 NOX5Q96PH1 765 aa13.76□□□□□ -0.21
RAD50-209ENST00000533482 UTYO14607 1347 aa13.76□□□□□ -0.21
RAD50-209ENST00000533482 AK9Q5TCS8 1911 aa13.76□□□□□ -0.21
RAD50-209ENST00000533482 HOXA13P31271 388 aaPredicted RBP13.76□□□□□ -0.21
RAD50-209ENST00000533482 CYP2J2P51589 502 aa13.76□□□□□ -0.21
RAD50-209ENST00000533482 IQCB1Q15051 598 aa13.76□□□□□ -0.21
RAD50-209ENST00000533482 BRIP1Q9BX63 1249 aa13.76□□□□□ -0.21
RAD50-209ENST00000533482 TAOK3Q9H2K8 898 aa13.76□□□□□ -0.21
RAD50-209ENST00000533482 SYNCQ9H7C4 482 aa13.76□□□□□ -0.21
RAD50-209ENST00000533482 PP2D1A8MPX8 630 aa13.76□□□□□ -0.21
RAD50-209ENST00000533482 USP17L5A8MUK1 530 aa13.76□□□□□ -0.21
RAD50-209ENST00000533482 SF3A3Q12874 501 aaKnown RBP eCLIP13.76□□□□□ -0.21
RAD50-209ENST00000533482 COL9A3Q14050 684 aaPredicted RBP13.76□□□□□ -0.21
RAD50-209ENST00000533482 ARHGAP44Q17R89 818 aa13.76□□□□□ -0.21
RAD50-209ENST00000533482 ARHGAP27Q6ZUM4 889 aa13.76□□□□□ -0.21
RAD50-209ENST00000533482 GJA10Q969M2 543 aa13.76□□□□□ -0.21
RAD50-209ENST00000533482 CCDC51Q96ER9 411 aa13.76□□□□□ -0.21
RAD50-209ENST00000533482 EFCAB8A8MWE9 144 aa13.75□□□□□ -0.21
RAD50-209ENST00000533482 HPDP32754 393 aaPredicted RBP13.75□□□□□ -0.21
RAD50-209ENST00000533482 CEP95Q96GE4 821 aa13.75□□□□□ -0.21
RAD50-209ENST00000533482 MXD3Q9BW11 206 aa13.75□□□□□ -0.21
RAD50-209ENST00000533482 LSM14BQ9BX40 385 aaKnown RBP13.75□□□□□ -0.21
RAD50-209ENST00000533482 TSGA10Q9BZW7 698 aa13.75□□□□□ -0.21
RAD50-209ENST00000533482 OPA1O60313 960 aa13.75□□□□□ -0.21
RAD50-209ENST00000533482 EEF2P13639 858 aaKnown RBP13.75□□□□□ -0.21
RAD50-209ENST00000533482 HSPA1LP34931 641 aa13.75□□□□□ -0.21
RAD50-209ENST00000533482 FAM26FQ5R3K3 315 aa13.75□□□□□ -0.21
RAD50-209ENST00000533482 CC2D2BQ6DHV5 1058 aa13.75□□□□□ -0.21
RAD50-209ENST00000533482 STAG2Q8N3U4 1231 aa13.75□□□□□ -0.21
RAD50-209ENST00000533482 GLT8D2Q9H1C3 349 aa13.75□□□□□ -0.21
RAD50-209ENST00000533482 EPC1Q9H2F5 836 aa13.75□□□□□ -0.21
RAD50-209ENST00000533482 SCAF8Q9UPN6 1271 aaKnown RBP13.75□□□□□ -0.21
RAD50-209ENST00000533482 TRIM49BA6NDI0 452 aa13.75□□□□□ -0.21
RAD50-209ENST00000533482 TEX33O43247 280 aa13.75□□□□□ -0.21
RAD50-209ENST00000533482 PLCG1P19174 1290 aa13.75□□□□□ -0.21
RAD50-209ENST00000533482 TRAPPC10P48553 1259 aa13.75□□□□□ -0.21
RAD50-209ENST00000533482 POLR2FP61218 127 aaKnown RBP13.75□□□□□ -0.21
RAD50-209ENST00000533482 NCBP1Q09161 790 aaKnown RBP13.75□□□□□ -0.21
RAD50-209ENST00000533482 SFMBT2Q5VUG0 894 aa13.75□□□□□ -0.21
RAD50-209ENST00000533482 FBXO38Q6PIJ6 1188 aa13.75□□□□□ -0.21
RAD50-209ENST00000533482 LMBR1Q8WVP7 490 aa13.75□□□□□ -0.21
RAD50-209ENST00000533482 NAP1L4Q99733 375 aaKnown RBP13.75□□□□□ -0.21
RAD50-209ENST00000533482 AMNQ9BXJ7 453 aa13.75□□□□□ -0.21
RAD50-209ENST00000533482 CHRNA5P30532 468 aa13.74□□□□□ -0.21
RAD50-209ENST00000533482 EAPPQ56P03 285 aaPredicted RBP13.74□□□□□ -0.21
RAD50-209ENST00000533482 IGDCC4Q8TDY8 1250 aa13.74□□□□□ -0.21
RAD50-209ENST00000533482 ZBED4O75132 1171 aa13.74□□□□□ -0.21
RAD50-209ENST00000533482 NTSR2O95665 410 aa13.74□□□□□ -0.21
RAD50-209ENST00000533482 GH2P01242 217 aa13.74□□□□□ -0.21
RAD50-209ENST00000533482 TUBBP07437 444 aa13.74□□□□□ -0.21
RAD50-209ENST00000533482 NBPF11Q86T75 865 aa13.74□□□□□ -0.21
RAD50-209ENST00000533482 IMPG2Q9BZV3 1241 aa13.74□□□□□ -0.21
RAD50-209ENST00000533482 ZBTB7AO95365 584 aa13.74□□□□□ -0.21
RAD50-209ENST00000533482 KRT5P13647 590 aa13.74□□□□□ -0.21
RAD50-209ENST00000533482 NPR1P16066 1061 aa13.74□□□□□ -0.21
RAD50-209ENST00000533482 TNFAIP3P21580 790 aa13.74□□□□□ -0.21
RAD50-209ENST00000533482 TNNC1P63316 161 aa13.74□□□□□ -0.21
RAD50-209ENST00000533482 TUBB4BP68371 445 aa13.74□□□□□ -0.21
RAD50-209ENST00000533482 ST3GAL1Q11201 340 aa13.74□□□□□ -0.21
RAD50-209ENST00000533482 SGMS1Q86VZ5 419 aa13.74□□□□□ -0.21
RAD50-209ENST00000533482 SMCR8Q8TEV9 937 aaPredicted RBP13.74□□□□□ -0.21
RAD50-209ENST00000533482 NSUN4Q96CB9 384 aaKnown RBP13.74□□□□□ -0.21
RAD50-209ENST00000533482 EPB41L4AQ9HCS5 686 aaPredicted RBP13.74□□□□□ -0.21
RAD50-209ENST00000533482 PANK4Q9NVE7 773 aa13.74□□□□□ -0.21
RAD50-209ENST00000533482 GOLGA6L7A0A1B0GV03 622 aa13.74□□□□□ -0.21
RAD50-209ENST00000533482 ABCB4P21439 1286 aa13.74□□□□□ -0.21
RAD50-209ENST00000533482 KRT31Q15323 416 aa13.74□□□□□ -0.21
RAD50-209ENST00000533482 AOC3Q16853 763 aa13.74□□□□□ -0.21
RAD50-209ENST00000533482 USP37Q86T82 979 aa13.74□□□□□ -0.21
RAD50-209ENST00000533482 FAM76AQ8TAV0 307 aa13.74□□□□□ -0.21
RAD50-209ENST00000533482 CCDC17Q96LX7 622 aa13.74□□□□□ -0.21
RAD50-209ENST00000533482 KDM6AO15550 1401 aaPredicted RBP13.73□□□□□ -0.21
RAD50-209ENST00000533482 BAZ2BQ9UIF8 2168 aaKnown RBP13.73□□□□□ -0.21
RAD50-209ENST00000533482 GPATCH4Q5T3I0 446 aaKnown RBP13.73□□□□□ -0.21
RAD50-209ENST00000533482 TOGARAM2Q6ZUX3 1019 aa13.73□□□□□ -0.21
RAD50-209ENST00000533482 METTL16Q86W50 562 aaKnown RBP13.73□□□□□ -0.21
RAD50-209ENST00000533482 UBLCP1Q8WVY7 318 aaPredicted RBP13.73□□□□□ -0.21
RAD50-209ENST00000533482 PLCD4Q9BRC7 762 aa13.73□□□□□ -0.21
RAD50-209ENST00000533482 PLA2G12BQ9BX93 195 aa13.73□□□□□ -0.21
RAD50-209ENST00000533482 COA1Q9GZY4 146 aa13.73□□□□□ -0.21
RAD50-209ENST00000533482 KANSL2Q9H9L4 492 aa13.73□□□□□ -0.21
RAD50-209ENST00000533482 CCPG1Q9ULG6 757 aa13.73□□□□□ -0.21
RAD50-209ENST00000533482 OVOS2A0A0G2JMS6 1433 aa13.73□□□□□ -0.21
RAD50-209ENST00000533482 RIMS1Q86UR5 1692 aaKnown RBP13.73□□□□□ -0.21
RAD50-209ENST00000533482 USP17L15C9J2P7 530 aa13.73□□□□□ -0.21
RAD50-209ENST00000533482 USP17L13C9JLJ4 530 aa13.73□□□□□ -0.21
RAD50-209ENST00000533482 USP17L11C9JVI0 530 aa13.73□□□□□ -0.21
RAD50-209ENST00000533482 USP17L18D6R9N7 530 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms