RNA–Protein interactions for RNA: ENST00000533455.5

CTSB-228, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 2,009 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-228ENST00000533455 IPO7O95373 1038 aaKnown RBP18.58■□□□□ 0.56
CTSB-228ENST00000533455 CYP2D6P10635 497 aa18.58■□□□□ 0.56
CTSB-228ENST00000533455 TNNT3P45378 269 aaPredicted RBP18.58■□□□□ 0.56
CTSB-228ENST00000533455 GNAQP50148 359 aa18.58■□□□□ 0.56
CTSB-228ENST00000533455 IQCEQ6IPM2 695 aa18.58■□□□□ 0.56
CTSB-228ENST00000533455 TYW1BQ6NUM6 668 aa18.58■□□□□ 0.56
CTSB-228ENST00000533455 ZSCAN29Q8IWY8 852 aaPredicted RBP18.58■□□□□ 0.56
CTSB-228ENST00000533455 FNBP4Q8N3X1 1017 aaPredicted RBP18.58■□□□□ 0.56
CTSB-228ENST00000533455 GOLGA6L1Q8N7Z2 621 aa18.58■□□□□ 0.56
CTSB-228ENST00000533455 RASSF8Q8NHQ8 419 aa18.58■□□□□ 0.56
CTSB-228ENST00000533455 RASGRP4Q8TDF6 673 aa18.58■□□□□ 0.56
CTSB-228ENST00000533455 RUBCNQ92622 972 aa18.58■□□□□ 0.56
CTSB-228ENST00000533455 ERGIC2Q96RQ1 377 aa18.58■□□□□ 0.56
CTSB-228ENST00000533455 TSGA10Q9BZW7 698 aa18.58■□□□□ 0.56
CTSB-228ENST00000533455 MINPP1Q9UNW1 487 aa18.58■□□□□ 0.56
CTSB-228ENST00000533455 TRIM66O15016 1216 aa18.57■□□□□ 0.56
CTSB-228ENST00000533455 TRIM21P19474 475 aaKnown RBP18.57■□□□□ 0.56
CTSB-228ENST00000533455 ATP6V1AP38606 617 aa18.57■□□□□ 0.56
CTSB-228ENST00000533455 VAV2P52735 878 aa18.57■□□□□ 0.56
CTSB-228ENST00000533455 C10orf67Q8IYJ2 551 aa18.57■□□□□ 0.56
CTSB-228ENST00000533455 LRRC15Q8TF66 581 aa18.57■□□□□ 0.56
CTSB-228ENST00000533455 CCDC47Q96A33 483 aaKnown RBP18.57■□□□□ 0.56
CTSB-228ENST00000533455 CAPZA3Q96KX2 299 aa18.57■□□□□ 0.56
CTSB-228ENST00000533455 TRIM34Q9BYJ4 488 aa18.57■□□□□ 0.56
CTSB-228ENST00000533455 RNF216Q9NWF9 866 aaPredicted RBP18.57■□□□□ 0.56
CTSB-228ENST00000533455 COL5A3P25940 1745 aaPredicted RBP18.57■□□□□ 0.56
CTSB-228ENST00000533455 TBC1D8BQ0IIM8 1120 aa18.57■□□□□ 0.56
CTSB-228ENST00000533455 COBLL1Q53SF7 1204 aa18.57■□□□□ 0.56
CTSB-228ENST00000533455 CCNI2Q6ZMN8 369 aaPredicted RBP18.57■□□□□ 0.56
CTSB-228ENST00000533455 ZNF572Q7Z3I7 529 aaPredicted RBP18.57■□□□□ 0.56
CTSB-228ENST00000533455 CNOT6LQ96LI5 555 aaKnown RBP18.57■□□□□ 0.56
CTSB-228ENST00000533455 AK8Q96MA6 479 aa18.57■□□□□ 0.56
CTSB-228ENST00000533455 ZNF652Q9Y2D9 606 aa18.57■□□□□ 0.56
CTSB-228ENST00000533455 ITIH3Q06033 890 aa18.56■□□□□ 0.56
CTSB-228ENST00000533455 MIIPQ5JXC2 388 aa18.56■□□□□ 0.56
CTSB-228ENST00000533455 FOXR1Q6PIV2 292 aa18.56■□□□□ 0.56
CTSB-228ENST00000533455 C3orf67Q6ZVT6 689 aa18.56■□□□□ 0.56
CTSB-228ENST00000533455 PNMA1Q8ND90 353 aa18.56■□□□□ 0.56
CTSB-228ENST00000533455 PDE2AO00408 941 aaPredicted RBP18.56■□□□□ 0.56
CTSB-228ENST00000533455 HNRNPH3P31942 346 aaKnown RBP18.56■□□□□ 0.56
CTSB-228ENST00000533455 ITPK1Q13572 414 aa18.56■□□□□ 0.56
CTSB-228ENST00000533455 STAG2Q8N3U4 1231 aa18.56■□□□□ 0.56
CTSB-228ENST00000533455 MMGT1Q8N4V1 131 aa18.56■□□□□ 0.56
CTSB-228ENST00000533455 CAGE1Q8TC20 777 aa18.56■□□□□ 0.56
CTSB-228ENST00000533455 SECISBP2LQ93073 1101 aaKnown RBP18.56■□□□□ 0.56
CTSB-228ENST00000533455 C7orf25Q9BPX7 421 aa18.56■□□□□ 0.56
CTSB-228ENST00000533455 LOC102724428A0A0B4J2F2 783 aa18.55■□□□□ 0.56
CTSB-228ENST00000533455 STXBP3O00186 592 aa18.55■□□□□ 0.56
CTSB-228ENST00000533455 IDEP14735 1019 aa18.55■□□□□ 0.56
CTSB-228ENST00000533455 KLK7P49862 253 aa18.55■□□□□ 0.56
CTSB-228ENST00000533455 SIK1P57059 783 aa18.55■□□□□ 0.56
CTSB-228ENST00000533455 INF2Q27J81 1249 aa18.55■□□□□ 0.56
CTSB-228ENST00000533455 ERFEQ4G0M1 354 aa18.55■□□□□ 0.56
CTSB-228ENST00000533455 CCDC178Q5BJE1 867 aa18.55■□□□□ 0.56
CTSB-228ENST00000533455 ANKRD40Q6AI12 368 aa18.55■□□□□ 0.56
CTSB-228ENST00000533455 CABP7Q86V35 215 aa18.55■□□□□ 0.56
CTSB-228ENST00000533455 ZBTB9Q96C00 473 aa18.55■□□□□ 0.56
CTSB-228ENST00000533455 SELENOOQ9BVL4 669 aa18.55■□□□□ 0.56
CTSB-228ENST00000533455 TRIM9Q9C026 710 aa18.55■□□□□ 0.56
CTSB-228ENST00000533455 IL17RBQ9NRM6 502 aa18.55■□□□□ 0.56
CTSB-228ENST00000533455 MAD2L2Q9UI95 211 aa18.55■□□□□ 0.56
CTSB-228ENST00000533455 ROBO3Q96MS0 1386 aa18.55■□□□□ 0.56
CTSB-228ENST00000533455 COL16A1Q07092 1604 aaPredicted RBP18.55■□□□□ 0.56
CTSB-228ENST00000533455 NUTM2BA6NNL0 878 aaPredicted RBP18.54■□□□□ 0.56
CTSB-228ENST00000533455 NUTM2EB1AL46 878 aaPredicted RBP18.54■□□□□ 0.56
CTSB-228ENST00000533455 PPFIA4O75335 1185 aa18.54■□□□□ 0.56
CTSB-228ENST00000533455 PLCG1P19174 1290 aa18.54■□□□□ 0.56
CTSB-228ENST00000533455 KIF5AQ12840 1032 aa18.54■□□□□ 0.56
CTSB-228ENST00000533455 SLC35G1Q2M3R5 365 aa18.54■□□□□ 0.56
CTSB-228ENST00000533455 AENQ8WTP8 325 aaKnown RBP18.54■□□□□ 0.56
CTSB-228ENST00000533455 BARHL2Q9NY43 387 aa18.54■□□□□ 0.56
CTSB-228ENST00000533455 SHOX2O60902 331 aaPredicted RBP18.54■□□□□ 0.56
CTSB-228ENST00000533455 MYBL2P10244 700 aa18.54■□□□□ 0.56
CTSB-228ENST00000533455 PRLRP16471 622 aa18.54■□□□□ 0.56
CTSB-228ENST00000533455 MTIF2P46199 727 aaKnown RBP18.54■□□□□ 0.56
CTSB-228ENST00000533455 PDE4DQ08499 809 aa18.54■□□□□ 0.56
CTSB-228ENST00000533455 CLEC4GQ6UXB4 293 aa18.54■□□□□ 0.56
CTSB-228ENST00000533455 TRIM58Q8NG06 486 aa18.54■□□□□ 0.56
CTSB-228ENST00000533455 CRACR2AQ9BSW2 395 aa18.54■□□□□ 0.56
CTSB-228ENST00000533455 NOC4LQ9BVI4 516 aaKnown RBP18.54■□□□□ 0.56
CTSB-228ENST00000533455 SNX12Q9UMY4 172 aa18.54■□□□□ 0.56
CTSB-228ENST00000533455 NAV1Q8NEY1 1877 aa18.53■□□□□ 0.56
CTSB-228ENST00000533455 AGPSO00116 658 aa18.53■□□□□ 0.56
CTSB-228ENST00000533455 ZNF263O14978 683 aa18.53■□□□□ 0.56
CTSB-228ENST00000533455 ZNF185O15231 689 aa18.53■□□□□ 0.56
CTSB-228ENST00000533455 TFAP4Q01664 338 aa18.53■□□□□ 0.56
CTSB-228ENST00000533455 FKBP15Q5T1M5 1219 aa18.53■□□□□ 0.56
CTSB-228ENST00000533455 CCDC70Q6NSX1 233 aa18.53■□□□□ 0.56
CTSB-228ENST00000533455 AMOTL1Q8IY63 956 aa18.53■□□□□ 0.56
CTSB-228ENST00000533455 PLIN2Q99541 437 aa18.53■□□□□ 0.56
CTSB-228ENST00000533455 TCP11L1Q9NUJ3 509 aa18.53■□□□□ 0.56
CTSB-228ENST00000533455 FAM184BQ9ULE4 1060 aa18.53■□□□□ 0.56
CTSB-228ENST00000533455 JRKLQ9Y4A0 524 aa18.53■□□□□ 0.56
CTSB-228ENST00000533455 LCA5LO95447 670 aa18.52■□□□□ 0.56
CTSB-228ENST00000533455 OR52Z1P0C646 297 aa18.52■□□□□ 0.56
CTSB-228ENST00000533455 GGCXP38435 758 aa18.52■□□□□ 0.56
CTSB-228ENST00000533455 C2orf54Q08AI8 447 aa18.52■□□□□ 0.56
CTSB-228ENST00000533455 STK4Q13043 487 aa18.52■□□□□ 0.56
CTSB-228ENST00000533455 SPA17Q15506 151 aa18.52■□□□□ 0.56
CTSB-228ENST00000533455 C12orf60Q5U649 245 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms