RNA–Protein interactions for RNA: ENST00000533252.1

CASP4-211, Transcript of caspase 4, humanhuman

TSL 3

Gene CASP4, Length 215 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-211ENST00000533252 LRRC4CQ9HCJ2 640 aa6.84□□□□□ -1.31
CASP4-211ENST00000533252 DNMT1P26358 1616 aaKnown RBP6.83□□□□□ -1.32
CASP4-211ENST00000533252 PTPN23Q9H3S7 1636 aa6.83□□□□□ -1.32
CASP4-211ENST00000533252 TMEM2Q9UHN6 1383 aa6.83□□□□□ -1.32
CASP4-211ENST00000533252 A0A1W2PQU0 124 aa6.83□□□□□ -1.32
CASP4-211ENST00000533252 VAMP4O75379 141 aa6.83□□□□□ -1.32
CASP4-211ENST00000533252 CYP7A1P22680 504 aa6.83□□□□□ -1.32
CASP4-211ENST00000533252 L1CAMP32004 1257 aa6.83□□□□□ -1.32
CASP4-211ENST00000533252 RNF4P78317 190 aa6.83□□□□□ -1.32
CASP4-211ENST00000533252 CDKAL1Q5VV42 579 aa6.83□□□□□ -1.32
CASP4-211ENST00000533252 SHKBP1Q8TBC3 707 aa6.83□□□□□ -1.32
CASP4-211ENST00000533252 FBXL18Q96ME1 805 aa6.83□□□□□ -1.32
CASP4-211ENST00000533252 ASPNQ9BXN1 380 aa6.83□□□□□ -1.32
CASP4-211ENST00000533252 NOL6Q9H6R4 1146 aaKnown RBP6.83□□□□□ -1.32
CASP4-211ENST00000533252 CWC22Q9HCG8 908 aaKnown RBP6.83□□□□□ -1.32
CASP4-211ENST00000533252 PCDHB12Q9Y5F1 795 aa6.83□□□□□ -1.32
CASP4-211ENST00000533252 PTCH2Q9Y6C5 1203 aa6.83□□□□□ -1.32
CASP4-211ENST00000533252 ERVK-7P63135 1459 aa6.83□□□□□ -1.32
CASP4-211ENST00000533252 MYO3AQ8NEV4 1616 aa6.83□□□□□ -1.32
CASP4-211ENST00000533252 EIF2AK4Q9P2K8 1649 aaKnown RBP6.83□□□□□ -1.32
CASP4-211ENST00000533252 ABCC3O15438 1527 aa6.82□□□□□ -1.32
CASP4-211ENST00000533252 MED14O60244 1454 aa6.82□□□□□ -1.32
CASP4-211ENST00000533252 SCAF11Q99590 1463 aaKnown RBP6.82□□□□□ -1.32
CASP4-211ENST00000533252 ADCY3O60266 1144 aa6.82□□□□□ -1.32
CASP4-211ENST00000533252 TNK2Q07912 1038 aa6.82□□□□□ -1.32
CASP4-211ENST00000533252 NFIAQ12857 509 aa6.82□□□□□ -1.32
CASP4-211ENST00000533252 CYP27C1Q4G0S4 372 aa6.82□□□□□ -1.32
CASP4-211ENST00000533252 ANKRD39Q53RE8 183 aa6.82□□□□□ -1.32
CASP4-211ENST00000533252 DTWD2Q8NBA8 298 aa6.82□□□□□ -1.32
CASP4-211ENST00000533252 SMARCC1Q92922 1105 aaPredicted RBP6.82□□□□□ -1.32
CASP4-211ENST00000533252 ZDHHC15Q96MV8 337 aa6.82□□□□□ -1.32
CASP4-211ENST00000533252 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.82□□□□□ -1.32
CASP4-211ENST00000533252 MSH6P52701 1360 aa6.82□□□□□ -1.32
CASP4-211ENST00000533252 ROCK1Q13464 1354 aa6.82□□□□□ -1.32
CASP4-211ENST00000533252 SBNO2Q9Y2G9 1366 aa6.82□□□□□ -1.32
CASP4-211ENST00000533252 LTBP4Q8N2S1 1624 aa6.81□□□□□ -1.32
CASP4-211ENST00000533252 PPP1R12AO14974 1030 aaPredicted RBP6.81□□□□□ -1.32
CASP4-211ENST00000533252 PPM1BO75688 479 aa6.81□□□□□ -1.32
CASP4-211ENST00000533252 KCNH1O95259 989 aa6.81□□□□□ -1.32
CASP4-211ENST00000533252 ITGA4P13612 1032 aa6.81□□□□□ -1.32
CASP4-211ENST00000533252 PPP2R2AP63151 447 aa6.81□□□□□ -1.32
CASP4-211ENST00000533252 SF1Q15637 639 aaKnown RBP6.81□□□□□ -1.32
CASP4-211ENST00000533252 C2orf27AQ580R0 203 aa6.81□□□□□ -1.32
CASP4-211ENST00000533252 FAM209AQ5JX71 171 aa6.81□□□□□ -1.32
CASP4-211ENST00000533252 DUSP27Q5VZP5 1158 aa6.81□□□□□ -1.32
CASP4-211ENST00000533252 EGFLAMQ63HQ2 1017 aa6.81□□□□□ -1.32
CASP4-211ENST00000533252 ZNF227Q86WZ6 799 aa6.81□□□□□ -1.32
CASP4-211ENST00000533252 OSBPL1AQ9BXW6 950 aa6.81□□□□□ -1.32
CASP4-211ENST00000533252 GBP3Q9H0R5 595 aa6.81□□□□□ -1.32
CASP4-211ENST00000533252 ARHGEF4Q9NR80 690 aa6.81□□□□□ -1.32
CASP4-211ENST00000533252 GTF2IRD1Q9UHL9 959 aa6.81□□□□□ -1.32
CASP4-211ENST00000533252 AKT3Q9Y243 479 aa6.81□□□□□ -1.32
CASP4-211ENST00000533252 ZC3H13Q5T200 1668 aaKnown RBP6.81□□□□□ -1.32
CASP4-211ENST00000533252 GNAT3A8MTJ3 354 aa6.8□□□□□ -1.32
CASP4-211ENST00000533252 FAM155AB1AL88 458 aaPredicted RBP6.8□□□□□ -1.32
CASP4-211ENST00000533252 H0Y8X5 98 aa6.8□□□□□ -1.32
CASP4-211ENST00000533252 PRAMEF1O95521 474 aa6.8□□□□□ -1.32
CASP4-211ENST00000533252 IGLV1-40P01703 118 aa6.8□□□□□ -1.32
CASP4-211ENST00000533252 FSTP19883 344 aa6.8□□□□□ -1.32
CASP4-211ENST00000533252 DPY19L1Q2PZI1 675 aa6.8□□□□□ -1.32
CASP4-211ENST00000533252 TKFCQ3LXA3 575 aa6.8□□□□□ -1.32
CASP4-211ENST00000533252 MEX3CQ5U5Q3 659 aaKnown RBP6.8□□□□□ -1.32
CASP4-211ENST00000533252 ARHGAP27Q6ZUM4 889 aa6.8□□□□□ -1.32
CASP4-211ENST00000533252 FIBCD1Q8N539 461 aa6.8□□□□□ -1.32
CASP4-211ENST00000533252 BVESQ8NE79 360 aa6.8□□□□□ -1.32
CASP4-211ENST00000533252 THAP3Q8WTV1 239 aaPredicted RBP6.8□□□□□ -1.32
CASP4-211ENST00000533252 BTN2A2Q8WVV5 523 aa6.8□□□□□ -1.32
CASP4-211ENST00000533252 DSCC1Q9BVC3 393 aa6.8□□□□□ -1.32
CASP4-211ENST00000533252 C19orf44Q9H6X5 657 aa6.8□□□□□ -1.32
CASP4-211ENST00000533252 ATG3Q9NT62 314 aa6.8□□□□□ -1.32
CASP4-211ENST00000533252 WHRNQ9P202 907 aa6.8□□□□□ -1.32
CASP4-211ENST00000533252 PLAGL2Q9UPG8 496 aa6.8□□□□□ -1.32
CASP4-211ENST00000533252 CAPN6Q9Y6Q1 641 aa6.8□□□□□ -1.32
CASP4-211ENST00000533252 ZNF142P52746 1687 aaPredicted RBP6.8□□□□□ -1.32
CASP4-211ENST00000533252 RPRD2Q5VT52 1461 aaKnown RBP6.79□□□□□ -1.32
CASP4-211ENST00000533252 SPATA31D1Q6ZQQ2 1576 aa6.79□□□□□ -1.32
CASP4-211ENST00000533252 AGRPO00253 132 aa6.79□□□□□ -1.32
CASP4-211ENST00000533252 OXCT1P55809 520 aa6.79□□□□□ -1.32
CASP4-211ENST00000533252 NMIQ13287 307 aaPredicted RBP6.79□□□□□ -1.32
CASP4-211ENST00000533252 NKPD1Q17RQ9 610 aa6.79□□□□□ -1.32
CASP4-211ENST00000533252 RSPO4Q2I0M5 234 aaPredicted RBP6.79□□□□□ -1.32
CASP4-211ENST00000533252 CLEC16AQ2KHT3 1053 aa6.79□□□□□ -1.32
CASP4-211ENST00000533252 GPAT2Q6NUI2 795 aa6.79□□□□□ -1.32
CASP4-211ENST00000533252 MFSD4AQ8N468 514 aa6.79□□□□□ -1.32
CASP4-211ENST00000533252 ZBTB38Q8NAP3 1195 aaPredicted RBP6.79□□□□□ -1.32
CASP4-211ENST00000533252 EXOC2Q96KP1 924 aa6.79□□□□□ -1.32
CASP4-211ENST00000533252 DBNDD2Q9BQY9 259 aa6.79□□□□□ -1.32
CASP4-211ENST00000533252 CHST7Q9NS84 486 aa6.79□□□□□ -1.32
CASP4-211ENST00000533252 ZSWIM5Q9P217 1185 aa6.79□□□□□ -1.32
CASP4-211ENST00000533252 CGGBP1Q9UFW8 167 aaPredicted RBP6.79□□□□□ -1.32
CASP4-211ENST00000533252 KCNH3Q9ULD8 1083 aa6.79□□□□□ -1.32
CASP4-211ENST00000533252 RNF17Q9BXT8 1623 aaKnown RBP6.79□□□□□ -1.32
CASP4-211ENST00000533252 EFCAB6Q5THR3 1501 aa6.78□□□□□ -1.32
CASP4-211ENST00000533252 H3BS24 57 aa6.78□□□□□ -1.32
CASP4-211ENST00000533252 NOP56O00567 594 aaKnown RBP6.78□□□□□ -1.32
CASP4-211ENST00000533252 PRODHO43272 600 aa6.78□□□□□ -1.32
CASP4-211ENST00000533252 CDC45O75419 566 aa6.78□□□□□ -1.32
CASP4-211ENST00000533252 ASMTLO95671 621 aa6.78□□□□□ -1.32
CASP4-211ENST00000533252 PROCP04070 461 aa6.78□□□□□ -1.32
CASP4-211ENST00000533252 NAT2P11245 290 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms