RNA–Protein interactions for RNA: ENST00000533246.5

BDNF-218, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,000 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-218ENST00000533246 CXCR5P32302 372 aa13.51□□□□□ -0.25
BDNF-218ENST00000533246 GUCY2FP51841 1108 aa13.51□□□□□ -0.25
BDNF-218ENST00000533246 TNNC1P63316 161 aa13.51□□□□□ -0.25
BDNF-218ENST00000533246 ICA1Q05084 483 aa13.51□□□□□ -0.25
BDNF-218ENST00000533246 UBE2SQ16763 222 aa13.51□□□□□ -0.25
BDNF-218ENST00000533246 FAM26FQ5R3K3 315 aa13.51□□□□□ -0.25
BDNF-218ENST00000533246 CCDC155Q8N6L0 562 aa13.51□□□□□ -0.25
BDNF-218ENST00000533246 ENAHQ8N8S7 591 aaPredicted RBP13.51□□□□□ -0.25
BDNF-218ENST00000533246 FAM76AQ8TAV0 307 aa13.51□□□□□ -0.25
BDNF-218ENST00000533246 SMCR8Q8TEV9 937 aaPredicted RBP13.51□□□□□ -0.25
BDNF-218ENST00000533246 IMPG2Q9BZV3 1241 aa13.51□□□□□ -0.25
BDNF-218ENST00000533246 ODF2LQ9ULJ1 636 aa13.51□□□□□ -0.25
BDNF-218ENST00000533246 SH3BP1Q9Y3L3 701 aa13.51□□□□□ -0.25
BDNF-218ENST00000533246 A0A1W2PRG0 241 aa13.5□□□□□ -0.25
BDNF-218ENST00000533246 FAM205CA6NFA0 338 aa13.5□□□□□ -0.25
BDNF-218ENST00000533246 INPP5BP32019 993 aa13.5□□□□□ -0.25
BDNF-218ENST00000533246 RABL6Q3YEC7 729 aaPredicted RBP13.5□□□□□ -0.25
BDNF-218ENST00000533246 SFMBT2Q5VUG0 894 aa13.5□□□□□ -0.25
BDNF-218ENST00000533246 PLVAPQ9BX97 442 aa13.5□□□□□ -0.25
BDNF-218ENST00000533246 DDX25Q9UHL0 483 aaKnown RBP13.5□□□□□ -0.25
BDNF-218ENST00000533246 G3BP2Q9UN86 482 aaKnown RBP13.5□□□□□ -0.25
BDNF-218ENST00000533246 RIPOR2Q9Y4F9 1068 aa13.5□□□□□ -0.25
BDNF-218ENST00000533246 CFAP74Q9C0B2 1584 aa13.5□□□□□ -0.25
BDNF-218ENST00000533246 KSR1Q8IVT5 923 aa13.5□□□□□ -0.25
BDNF-218ENST00000533246 MICAL1Q8TDZ2 1067 aa13.5□□□□□ -0.25
BDNF-218ENST00000533246 NBPF3Q9H094 633 aa13.5□□□□□ -0.25
BDNF-218ENST00000533246 EPC1Q9H2F5 836 aa13.5□□□□□ -0.25
BDNF-218ENST00000533246 MYO1AQ9UBC5 1043 aa13.5□□□□□ -0.25
BDNF-218ENST00000533246 EIF3CLB5ME19 914 aaKnown RBP13.5□□□□□ -0.25
BDNF-218ENST00000533246 UBE2Q2LH0YL09 131 aa13.5□□□□□ -0.25
BDNF-218ENST00000533246 GAS7O60861 476 aa13.5□□□□□ -0.25
BDNF-218ENST00000533246 NAA35Q5VZE5 725 aa13.5□□□□□ -0.25
BDNF-218ENST00000533246 USP37Q86T82 979 aa13.5□□□□□ -0.25
BDNF-218ENST00000533246 RSRC1Q96IZ7 334 aaKnown RBP13.5□□□□□ -0.25
BDNF-218ENST00000533246 CNOT6LQ96LI5 555 aaKnown RBP13.5□□□□□ -0.25
BDNF-218ENST00000533246 EIF3CQ99613 913 aaKnown RBP13.5□□□□□ -0.25
BDNF-218ENST00000533246 LY9Q9HBG7 655 aa13.5□□□□□ -0.25
BDNF-218ENST00000533246 CTTNBP2NLQ9P2B4 639 aa13.5□□□□□ -0.25
BDNF-218ENST00000533246 SRPRBQ9Y5M8 271 aaKnown RBP13.5□□□□□ -0.25
BDNF-218ENST00000533246 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.5□□□□□ -0.25
BDNF-218ENST00000533246 PALLDQ8WX93 1383 aa13.5□□□□□ -0.25
BDNF-218ENST00000533246 PP2D1A8MPX8 630 aa13.49□□□□□ -0.25
BDNF-218ENST00000533246 IKBKBO14920 756 aa13.49□□□□□ -0.25
BDNF-218ENST00000533246 ALAS1P13196 640 aa13.49□□□□□ -0.25
BDNF-218ENST00000533246 PPP1R2P41236 205 aa13.49□□□□□ -0.25
BDNF-218ENST00000533246 USP49Q70CQ1 688 aa13.49□□□□□ -0.25
BDNF-218ENST00000533246 CPLX4Q7Z7G2 160 aa13.49□□□□□ -0.25
BDNF-218ENST00000533246 DAAM2Q86T65 1068 aa13.49□□□□□ -0.25
BDNF-218ENST00000533246 NBPF11Q86T75 865 aa13.49□□□□□ -0.25
BDNF-218ENST00000533246 CCDC127Q96BQ5 260 aa13.49□□□□□ -0.25
BDNF-218ENST00000533246 PAGE5Q96GU1 130 aa13.49□□□□□ -0.25
BDNF-218ENST00000533246 FNBP1Q96RU3 617 aa13.49□□□□□ -0.25
BDNF-218ENST00000533246 SERPINB13Q9UIV8 391 aa13.49□□□□□ -0.25
BDNF-218ENST00000533246 ZNF609O15014 1411 aa13.49□□□□□ -0.25
BDNF-218ENST00000533246 PTPREP23469 700 aa13.49□□□□□ -0.25
BDNF-218ENST00000533246 ACTN2P35609 894 aa13.49□□□□□ -0.25
BDNF-218ENST00000533246 ADAM9Q13443 819 aa13.49□□□□□ -0.25
BDNF-218ENST00000533246 PPP1R7Q15435 360 aa13.49□□□□□ -0.25
BDNF-218ENST00000533246 TTC16Q8NEE8 873 aa13.49□□□□□ -0.25
BDNF-218ENST00000533246 SH3RF3Q8TEJ3 882 aaPredicted RBP13.49□□□□□ -0.25
BDNF-218ENST00000533246 PANK4Q9NVE7 773 aa13.49□□□□□ -0.25
BDNF-218ENST00000533246 XDHP47989 1333 aa13.49□□□□□ -0.25
BDNF-218ENST00000533246 RPAP1Q9BWH6 1393 aaPredicted RBP13.49□□□□□ -0.25
BDNF-218ENST00000533246 PSDA5PKW4 1024 aaPredicted RBP13.49□□□□□ -0.25
BDNF-218ENST00000533246 LONP1P36776 959 aaKnown RBP13.49□□□□□ -0.25
BDNF-218ENST00000533246 SRLQ86TD4 932 aa13.49□□□□□ -0.25
BDNF-218ENST00000533246 CCDC114Q96M63 670 aa13.49□□□□□ -0.25
BDNF-218ENST00000533246 KCNK9Q9NPC2 374 aa13.49□□□□□ -0.25
BDNF-218ENST00000533246 MED4Q9NPJ6 270 aa13.49□□□□□ -0.25
BDNF-218ENST00000533246 ARMCX3Q9UH62 379 aaPredicted RBP13.49□□□□□ -0.25
BDNF-218ENST00000533246 PCDHA4Q9UN74 947 aa13.49□□□□□ -0.25
BDNF-218ENST00000533246 ERCC5P28715 1186 aaPredicted RBP13.48□□□□□ -0.25
BDNF-218ENST00000533246 ZKSCAN8Q15776 578 aaPredicted RBP13.48□□□□□ -0.25
BDNF-218ENST00000533246 U2AF1L4Q8WU68 220 aaKnown RBP13.48□□□□□ -0.25
BDNF-218ENST00000533246 SPTLC3Q9NUV7 552 aa13.48□□□□□ -0.25
BDNF-218ENST00000533246 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.48□□□□□ -0.25
BDNF-218ENST00000533246 PPRC1Q5VV67 1664 aaKnown RBP13.48□□□□□ -0.25
BDNF-218ENST00000533246 MYO3AQ8NEV4 1616 aa13.48□□□□□ -0.25
BDNF-218ENST00000533246 BAZ2BQ9UIF8 2168 aaKnown RBP13.48□□□□□ -0.25
BDNF-218ENST00000533246 UBN2Q6ZU65 1347 aa13.48□□□□□ -0.25
BDNF-218ENST00000533246 TRIM49BA6NDI0 452 aa13.48□□□□□ -0.25
BDNF-218ENST00000533246 EXOSC10Q01780 885 aaKnown RBP13.48□□□□□ -0.25
BDNF-218ENST00000533246 TBC1D9BQ66K14 1250 aa13.48□□□□□ -0.25
BDNF-218ENST00000533246 FBXO38Q6PIJ6 1188 aa13.48□□□□□ -0.25
BDNF-218ENST00000533246 SHC4Q6S5L8 630 aa13.48□□□□□ -0.25
BDNF-218ENST00000533246 UHMK1Q8TAS1 419 aaKnown RBP13.48□□□□□ -0.25
BDNF-218ENST00000533246 ENOX1Q8TC92 643 aaKnown RBP13.48□□□□□ -0.25
BDNF-218ENST00000533246 TSGA10Q9BZW7 698 aa13.48□□□□□ -0.25
BDNF-218ENST00000533246 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.48□□□□□ -0.25
BDNF-218ENST00000533246 ZCCHC17Q9NP64 241 aaKnown RBP13.48□□□□□ -0.25
BDNF-218ENST00000533246 BSDC1Q9NW68 430 aaPredicted RBP13.48□□□□□ -0.25
BDNF-218ENST00000533246 TESPA1A2RU30 521 aaPredicted RBP13.48□□□□□ -0.25
BDNF-218ENST00000533246 GOLGA6BA6NDN3 693 aa13.48□□□□□ -0.25
BDNF-218ENST00000533246 XRCC5P13010 732 aaKnown RBP13.48□□□□□ -0.25
BDNF-218ENST00000533246 PLCG1P19174 1290 aa13.48□□□□□ -0.25
BDNF-218ENST00000533246 RASSF7Q02833 373 aa13.48□□□□□ -0.25
BDNF-218ENST00000533246 CUL4BQ13620 913 aa13.48□□□□□ -0.25
BDNF-218ENST00000533246 RPS6KA1Q15418 735 aa13.48□□□□□ -0.25
BDNF-218ENST00000533246 MICALCLQ6ZW33 695 aa13.48□□□□□ -0.25
BDNF-218ENST00000533246 PEX26Q7Z412 305 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms