RNA–Protein interactions for RNA: ENST00000533229.1

CACNA1E-208, Transcript of calcium voltage-gated channel subunit alpha1 E, humanhuman

TSL 1 (best)

Gene CACNA1E, Length 2,142 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1E-208ENST00000533229 REXO1Q8N1G1 1221 aaKnown RBP17.26■□□□□ 0.35
CACNA1E-208ENST00000533229 AK8Q96MA6 479 aa17.26■□□□□ 0.35
CACNA1E-208ENST00000533229 CARD6Q9BX69 1037 aa17.26■□□□□ 0.35
CACNA1E-208ENST00000533229 NAA15Q9BXJ9 866 aaKnown RBP17.26■□□□□ 0.35
CACNA1E-208ENST00000533229 ZC3H12CQ9C0D7 883 aaKnown RBP17.26■□□□□ 0.35
CACNA1E-208ENST00000533229 DDX41Q9UJV9 622 aaKnown RBP17.26■□□□□ 0.35
CACNA1E-208ENST00000533229 LTBP1Q14766 1721 aa17.26■□□□□ 0.35
CACNA1E-208ENST00000533229 FECHP22830 423 aa17.25■□□□□ 0.35
CACNA1E-208ENST00000533229 CASQ1P31415 396 aa17.25■□□□□ 0.35
CACNA1E-208ENST00000533229 ERVK-24P63145 666 aa17.25■□□□□ 0.35
CACNA1E-208ENST00000533229 CNGA4Q8IV77 575 aa17.25■□□□□ 0.35
CACNA1E-208ENST00000533229 TRIM9Q9C026 710 aa17.25■□□□□ 0.35
CACNA1E-208ENST00000533229 LZTFL1Q9NQ48 299 aa17.25■□□□□ 0.35
CACNA1E-208ENST00000533229 USP40Q9NVE5 1235 aa17.25■□□□□ 0.35
CACNA1E-208ENST00000533229 ESYT2A0FGR8 921 aa17.24■□□□□ 0.35
CACNA1E-208ENST00000533229 MYL1P05976 194 aa17.24■□□□□ 0.35
CACNA1E-208ENST00000533229 ZSCAN20P17040 1043 aaPredicted RBP17.24■□□□□ 0.35
CACNA1E-208ENST00000533229 MAP3K9P80192 1104 aa17.24■□□□□ 0.35
CACNA1E-208ENST00000533229 TMC4Q7Z404 712 aa17.24■□□□□ 0.35
CACNA1E-208ENST00000533229 EEF2KMTQ96G04 330 aa17.24■□□□□ 0.35
CACNA1E-208ENST00000533229 GPCPD1Q9NPB8 672 aa17.24■□□□□ 0.35
CACNA1E-208ENST00000533229 ABHD10Q9NUJ1 306 aa17.24■□□□□ 0.35
CACNA1E-208ENST00000533229 ZNF446Q9NWS9 450 aa17.24■□□□□ 0.35
CACNA1E-208ENST00000533229 TXKP42681 527 aa17.24■□□□□ 0.35
CACNA1E-208ENST00000533229 UBXN1Q04323 297 aa17.24■□□□□ 0.35
CACNA1E-208ENST00000533229 TTI2Q6NXR4 508 aa17.24■□□□□ 0.35
CACNA1E-208ENST00000533229 KRT27Q7Z3Y8 459 aa17.24■□□□□ 0.35
CACNA1E-208ENST00000533229 MTMR9Q96QG7 549 aa17.24■□□□□ 0.35
CACNA1E-208ENST00000533229 SRRTQ9BXP5 876 aaKnown RBP17.24■□□□□ 0.35
CACNA1E-208ENST00000533229 KCNQ5Q9NR82 932 aa17.24■□□□□ 0.35
CACNA1E-208ENST00000533229 SERPINB13Q9UIV8 391 aa17.24■□□□□ 0.35
CACNA1E-208ENST00000533229 SUGT1Q9Y2Z0 365 aa17.24■□□□□ 0.35
CACNA1E-208ENST00000533229 SLC37A4O43826 429 aa17.23■□□□□ 0.35
CACNA1E-208ENST00000533229 PPP1R11O60927 126 aaPredicted RBP17.23■□□□□ 0.35
CACNA1E-208ENST00000533229 TADA3O75528 432 aa17.23■□□□□ 0.35
CACNA1E-208ENST00000533229 ABL1P00519 1130 aa17.23■□□□□ 0.35
CACNA1E-208ENST00000533229 H2AFXP16104 143 aaPredicted RBP17.23■□□□□ 0.35
CACNA1E-208ENST00000533229 SHMT1P34896 483 aa17.23■□□□□ 0.35
CACNA1E-208ENST00000533229 NFIAQ12857 509 aa17.23■□□□□ 0.35
CACNA1E-208ENST00000533229 STK4Q13043 487 aa17.23■□□□□ 0.35
CACNA1E-208ENST00000533229 ARHGAP29Q52LW3 1261 aa17.23■□□□□ 0.35
CACNA1E-208ENST00000533229 TTBK2Q6IQ55 1244 aa17.23■□□□□ 0.35
CACNA1E-208ENST00000533229 APOBEC3HQ6NTF7 200 aaKnown RBP17.23■□□□□ 0.35
CACNA1E-208ENST00000533229 CDC42EP5Q6NZY7 148 aa17.23■□□□□ 0.35
CACNA1E-208ENST00000533229 JMJD4Q9H9V9 463 aa17.23■□□□□ 0.35
CACNA1E-208ENST00000533229 OGFRQ9NZT2 677 aa17.23■□□□□ 0.35
CACNA1E-208ENST00000533229 TDP2O95551 362 aa17.23■□□□□ 0.35
CACNA1E-208ENST00000533229 TTLL1O95922 423 aa17.23■□□□□ 0.35
CACNA1E-208ENST00000533229 FCER1AP12319 257 aa17.23■□□□□ 0.35
CACNA1E-208ENST00000533229 ASPRV1Q53RT3 343 aa17.23■□□□□ 0.35
CACNA1E-208ENST00000533229 COL23A1Q86Y22 540 aaPredicted RBP17.23■□□□□ 0.35
CACNA1E-208ENST00000533229 ZFPM1Q8IX07 1006 aa17.23■□□□□ 0.35
CACNA1E-208ENST00000533229 ACRBPQ8NEB7 543 aa17.23■□□□□ 0.35
CACNA1E-208ENST00000533229 ANKRD20A12PQ8NF67 263 aa17.23■□□□□ 0.35
CACNA1E-208ENST00000533229 NUP88Q99567 741 aaPredicted RBP17.23■□□□□ 0.35
CACNA1E-208ENST00000533229 DUSP9Q99956 384 aaKnown RBP17.23■□□□□ 0.35
CACNA1E-208ENST00000533229 CUEDC2Q9H467 287 aa17.23■□□□□ 0.35
CACNA1E-208ENST00000533229 MRFAP1Q9Y605 127 aa17.23■□□□□ 0.35
CACNA1E-208ENST00000533229 LRRC37AA6NMS7 1700 aa17.22■□□□□ 0.35
CACNA1E-208ENST00000533229 ADGRF4Q8IZF3 695 aa17.22■□□□□ 0.35
CACNA1E-208ENST00000533229 ZNF507Q8TCN5 953 aa17.22■□□□□ 0.35
CACNA1E-208ENST00000533229 HPS3Q969F9 1004 aa17.22■□□□□ 0.35
CACNA1E-208ENST00000533229 CCDC51Q96ER9 411 aa17.22■□□□□ 0.35
CACNA1E-208ENST00000533229 C7orf25Q9BPX7 421 aa17.22■□□□□ 0.35
CACNA1E-208ENST00000533229 PCDHAC2Q9Y5I4 1007 aa17.22■□□□□ 0.35
CACNA1E-208ENST00000533229 MYH1P12882 1939 aa17.22■□□□□ 0.35
CACNA1E-208ENST00000533229 PSMA7O14818 248 aa17.21■□□□□ 0.35
CACNA1E-208ENST00000533229 DMTNQ08495 405 aa17.21■□□□□ 0.35
CACNA1E-208ENST00000533229 PDE4DQ08499 809 aa17.21■□□□□ 0.35
CACNA1E-208ENST00000533229 ZNF543Q08ER8 600 aa17.21■□□□□ 0.35
CACNA1E-208ENST00000533229 MB21D1Q8N884 522 aa17.21■□□□□ 0.35
CACNA1E-208ENST00000533229 MNS1Q8NEH6 495 aa17.21■□□□□ 0.35
CACNA1E-208ENST00000533229 TRIM47Q96LD4 638 aa17.21■□□□□ 0.35
CACNA1E-208ENST00000533229 EPC1Q9H2F5 836 aa17.21■□□□□ 0.35
CACNA1E-208ENST00000533229 hCG_1984214I3L0E3 225 aa17.21■□□□□ 0.35
CACNA1E-208ENST00000533229 NKRFO15226 690 aaKnown RBP eCLIP17.21■□□□□ 0.35
CACNA1E-208ENST00000533229 NPR1P16066 1061 aa17.21■□□□□ 0.35
CACNA1E-208ENST00000533229 KRT9P35527 623 aa17.21■□□□□ 0.35
CACNA1E-208ENST00000533229 SLC16A2P36021 539 aa17.21■□□□□ 0.35
CACNA1E-208ENST00000533229 ADCY7P51828 1080 aa17.21■□□□□ 0.35
CACNA1E-208ENST00000533229 GRB10Q13322 594 aa17.21■□□□□ 0.35
CACNA1E-208ENST00000533229 ZNF713Q8N859 430 aaPredicted RBP17.21■□□□□ 0.35
CACNA1E-208ENST00000533229 UBXN4Q92575 508 aa17.21■□□□□ 0.35
CACNA1E-208ENST00000533229 THAP9Q9H5L6 903 aa17.21■□□□□ 0.35
CACNA1E-208ENST00000533229 MAGEF1Q9HAY2 307 aa17.21■□□□□ 0.35
CACNA1E-208ENST00000533229 BLOC1S4Q9NUP1 217 aa17.21■□□□□ 0.35
CACNA1E-208ENST00000533229 TTC26A0AVF1 554 aa17.2■□□□□ 0.34
CACNA1E-208ENST00000533229 LGALS16A8MUM7 142 aa17.2■□□□□ 0.34
CACNA1E-208ENST00000533229 TPM1P09493 284 aa17.2■□□□□ 0.34
CACNA1E-208ENST00000533229 EEF1GP26641 437 aaKnown RBP17.2■□□□□ 0.34
CACNA1E-208ENST00000533229 ASIC1P78348 528 aa17.2■□□□□ 0.34
CACNA1E-208ENST00000533229 STIM1Q13586 685 aa17.2■□□□□ 0.34
CACNA1E-208ENST00000533229 CALCRLQ16602 461 aa17.2■□□□□ 0.34
CACNA1E-208ENST00000533229 UBE2SQ16763 222 aa17.2■□□□□ 0.34
CACNA1E-208ENST00000533229 ANKRD40Q6AI12 368 aa17.2■□□□□ 0.34
CACNA1E-208ENST00000533229 TMTC1Q8IUR5 882 aa17.2■□□□□ 0.34
CACNA1E-208ENST00000533229 CHP1Q99653 195 aa17.2■□□□□ 0.34
CACNA1E-208ENST00000533229 EFCAB8A8MWE9 144 aa17.2■□□□□ 0.34
CACNA1E-208ENST00000533229 CLCN6P51797 869 aa17.2■□□□□ 0.34
CACNA1E-208ENST00000533229 SHROOM1Q2M3G4 852 aaPredicted RBP17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms