RNA–Protein interactions for RNA: ENST00000533189.1

CTNND1-235, Transcript of catenin delta 1, humanhuman

TSL 3

Gene CTNND1, Length 498 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-235ENST00000533189 ZNF444Q8N0Y2 327 aaPredicted RBP12.75□□□□□ -0.37
CTNND1-235ENST00000533189 FAM133AQ8N9E0 248 aa12.75□□□□□ -0.37
CTNND1-235ENST00000533189 SCLYQ96I15 445 aa12.75□□□□□ -0.37
CTNND1-235ENST00000533189 PUS7LQ9H0K6 701 aaKnown RBP12.75□□□□□ -0.37
CTNND1-235ENST00000533189 ZNF287Q9HBT7 754 aa12.75□□□□□ -0.37
CTNND1-235ENST00000533189 COG5Q9UP83 839 aa12.75□□□□□ -0.37
CTNND1-235ENST00000533189 GNEQ9Y223 722 aaKnown RBP12.75□□□□□ -0.37
CTNND1-235ENST00000533189 COG6Q9Y2V7 657 aa12.75□□□□□ -0.37
CTNND1-235ENST00000533189 SCN5AQ14524 2016 aa12.74□□□□□ -0.37
CTNND1-235ENST00000533189 GRIN2DO15399 1336 aa12.74□□□□□ -0.37
CTNND1-235ENST00000533189 CCER2I3L3R5 266 aa12.74□□□□□ -0.37
CTNND1-235ENST00000533189 PFKMP08237 780 aa12.74□□□□□ -0.37
CTNND1-235ENST00000533189 PSMC6P62333 389 aa12.74□□□□□ -0.37
CTNND1-235ENST00000533189 IKQ13123 557 aaPredicted RBP12.74□□□□□ -0.37
CTNND1-235ENST00000533189 IQSEC1Q6DN90 963 aa12.74□□□□□ -0.37
CTNND1-235ENST00000533189 MKL1Q969V6 931 aa12.74□□□□□ -0.37
CTNND1-235ENST00000533189 LRFN3Q9BTN0 628 aa12.74□□□□□ -0.37
CTNND1-235ENST00000533189 A1CFQ9NQ94 594 aaKnown RBP12.74□□□□□ -0.37
CTNND1-235ENST00000533189 RNF146Q9NTX7 359 aa12.74□□□□□ -0.37
CTNND1-235ENST00000533189 SYNPO2Q9UMS6 1093 aa12.74□□□□□ -0.37
CTNND1-235ENST00000533189 ARIH1Q9Y4X5 557 aaPredicted RBP12.74□□□□□ -0.37
CTNND1-235ENST00000533189 MTCH2Q9Y6C9 303 aa12.74□□□□□ -0.37
CTNND1-235ENST00000533189 PIEZO1Q92508 2521 aa12.74□□□□□ -0.37
CTNND1-235ENST00000533189 IGKV6D-41A0A0C4DH26 115 aa12.73□□□□□ -0.37
CTNND1-235ENST00000533189 SOWAHBA6NEL2 793 aa12.73□□□□□ -0.37
CTNND1-235ENST00000533189 RFXAPO00287 272 aa12.73□□□□□ -0.37
CTNND1-235ENST00000533189 TTLL1O95922 423 aa12.73□□□□□ -0.37
CTNND1-235ENST00000533189 CA3P07451 260 aa12.73□□□□□ -0.37
CTNND1-235ENST00000533189 SUPT20HL2P0C7V6 817 aa12.73□□□□□ -0.37
CTNND1-235ENST00000533189 BMP3P12645 472 aa12.73□□□□□ -0.37
CTNND1-235ENST00000533189 ACTN1P12814 892 aa12.73□□□□□ -0.37
CTNND1-235ENST00000533189 SMPD1P17405 629 aa12.73□□□□□ -0.37
CTNND1-235ENST00000533189 POU3F3P20264 500 aaPredicted RBP12.73□□□□□ -0.37
CTNND1-235ENST00000533189 STAT2P52630 851 aa12.73□□□□□ -0.37
CTNND1-235ENST00000533189 TTLL4Q14679 1199 aa12.73□□□□□ -0.37
CTNND1-235ENST00000533189 TKFCQ3LXA3 575 aa12.73□□□□□ -0.37
CTNND1-235ENST00000533189 TMEM31Q5JXX7 168 aa12.73□□□□□ -0.37
CTNND1-235ENST00000533189 SLFN13Q68D06 897 aa12.73□□□□□ -0.37
CTNND1-235ENST00000533189 GIMAP6Q6P9H5 292 aa12.73□□□□□ -0.37
CTNND1-235ENST00000533189 DEFB128Q7Z7B8 93 aa12.73□□□□□ -0.37
CTNND1-235ENST00000533189 RPAP2Q8IXW5 612 aaPredicted RBP12.73□□□□□ -0.37
CTNND1-235ENST00000533189 LRRC47Q8N1G4 583 aaKnown RBP12.73□□□□□ -0.37
CTNND1-235ENST00000533189 GMCL1P1Q8NEA9 526 aa12.73□□□□□ -0.37
CTNND1-235ENST00000533189 PANK1Q8TE04 598 aa12.73□□□□□ -0.37
CTNND1-235ENST00000533189 CEP95Q96GE4 821 aa12.73□□□□□ -0.37
CTNND1-235ENST00000533189 ALDH8A1Q9H2A2 487 aaPredicted RBP12.73□□□□□ -0.37
CTNND1-235ENST00000533189 EPHX3Q9H6B9 360 aa12.73□□□□□ -0.37
CTNND1-235ENST00000533189 CERS4Q9HA82 394 aa12.73□□□□□ -0.37
CTNND1-235ENST00000533189 GSG1L2A8MUP6 293 aa12.72□□□□□ -0.37
CTNND1-235ENST00000533189 TMEM232C9JQI7 657 aa12.72□□□□□ -0.37
CTNND1-235ENST00000533189 ALAS1P13196 640 aa12.72□□□□□ -0.37
CTNND1-235ENST00000533189 TDO2P48775 406 aa12.72□□□□□ -0.37
CTNND1-235ENST00000533189 EEPD1Q7L9B9 569 aa12.72□□□□□ -0.37
CTNND1-235ENST00000533189 FAM160B2Q86V87 743 aa12.72□□□□□ -0.37
CTNND1-235ENST00000533189 FBXO16Q8IX29 292 aaPredicted RBP12.72□□□□□ -0.37
CTNND1-235ENST00000533189 CHURC1Q8WUH1 139 aa12.72□□□□□ -0.37
CTNND1-235ENST00000533189 AGBL1Q96MI9 1066 aa12.72□□□□□ -0.37
CTNND1-235ENST00000533189 TRERF1Q96PN7 1200 aa12.72□□□□□ -0.37
CTNND1-235ENST00000533189 STRBPQ96SI9 672 aaKnown RBP12.72□□□□□ -0.37
CTNND1-235ENST00000533189 SLC9A7Q96T83 725 aa12.72□□□□□ -0.37
CTNND1-235ENST00000533189 POLR3EQ9NVU0 708 aa12.72□□□□□ -0.37
CTNND1-235ENST00000533189 MTMR4Q9NYA4 1195 aa12.72□□□□□ -0.37
CTNND1-235ENST00000533189 Q9Y3F1 56 aa12.72□□□□□ -0.37
CTNND1-235ENST00000533189 MUC6Q6W4X9 2439 aa12.71□□□□□ -0.37
CTNND1-235ENST00000533189 BRWD1Q9NSI6 2320 aa12.71□□□□□ -0.37
CTNND1-235ENST00000533189 TNKSO95271 1327 aa12.71□□□□□ -0.37
CTNND1-235ENST00000533189 KIF28PB7ZC32 967 aa12.71□□□□□ -0.37
CTNND1-235ENST00000533189 PRDM1O75626 825 aa12.71□□□□□ -0.37
CTNND1-235ENST00000533189 CYP2C9P11712 490 aa12.71□□□□□ -0.37
CTNND1-235ENST00000533189 PTGS1P23219 599 aa12.71□□□□□ -0.37
CTNND1-235ENST00000533189 TAPT1Q6NXT6 567 aa12.71□□□□□ -0.37
CTNND1-235ENST00000533189 KIAA1211Q6ZU35 1233 aa12.71□□□□□ -0.37
CTNND1-235ENST00000533189 ARNTL2Q8WYA1 636 aa12.71□□□□□ -0.37
CTNND1-235ENST00000533189 HLA-CQ95604 372 aa12.71□□□□□ -0.37
CTNND1-235ENST00000533189 VTA1Q9NP79 307 aa12.71□□□□□ -0.37
CTNND1-235ENST00000533189 PDGFCQ9NRA1 345 aa12.71□□□□□ -0.37
CTNND1-235ENST00000533189 TRMT13Q9NUP7 481 aaKnown RBP12.71□□□□□ -0.37
CTNND1-235ENST00000533189 TLL1O43897 1013 aa12.7□□□□□ -0.38
CTNND1-235ENST00000533189 APPP05067 770 aa12.7□□□□□ -0.38
CTNND1-235ENST00000533189 TSPY3P0CV98 308 aa12.7□□□□□ -0.38
CTNND1-235ENST00000533189 TSPY8P0CW00 308 aa12.7□□□□□ -0.38
CTNND1-235ENST00000533189 MS4A1P11836 297 aa12.7□□□□□ -0.38
CTNND1-235ENST00000533189 RFC2P35250 354 aa12.7□□□□□ -0.38
CTNND1-235ENST00000533189 PHOSPHO2Q8TCD6 241 aa12.7□□□□□ -0.38
CTNND1-235ENST00000533189 STAG1Q8WVM7 1258 aa12.7□□□□□ -0.38
CTNND1-235ENST00000533189 VWCEQ96DN2 955 aa12.7□□□□□ -0.38
CTNND1-235ENST00000533189 FTOQ9C0B1 505 aaKnown RBP eCLIP12.7□□□□□ -0.382e-18■□□□□ 11.2
CTNND1-235ENST00000533189 GPHNQ9NQX3 736 aaPredicted RBP12.7□□□□□ -0.38
CTNND1-235ENST00000533189 DDX49Q9Y6V7 483 aaKnown RBP12.7□□□□□ -0.38
CTNND1-235ENST00000533189 TANC1Q9C0D5 1861 aa12.7□□□□□ -0.38
CTNND1-235ENST00000533189 ZNF536O15090 1300 aa12.69□□□□□ -0.38
CTNND1-235ENST00000533189 LCTP09848 1927 aa12.69□□□□□ -0.38
CTNND1-235ENST00000533189 EPOPA6NHQ4 379 aa12.69□□□□□ -0.38
CTNND1-235ENST00000533189 MYL3P08590 195 aa12.69□□□□□ -0.38
CTNND1-235ENST00000533189 GNAT2P19087 354 aa12.69□□□□□ -0.38
CTNND1-235ENST00000533189 SLC1A4P43007 532 aa12.69□□□□□ -0.38
CTNND1-235ENST00000533189 CPT1AP50416 773 aa12.69□□□□□ -0.38
CTNND1-235ENST00000533189 TAP1Q03518 808 aa12.69□□□□□ -0.38
CTNND1-235ENST00000533189 DUSP28Q4G0W2 176 aa12.69□□□□□ -0.38
CTNND1-235ENST00000533189 FAM47CQ5HY64 1035 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms