RNA–Protein interactions for RNA: ENST00000533145.5

HIF3A-215, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-215ENST00000533145 MRPL11Q9Y3B7 192 aaKnown RBP16.2■□□□□ 0.18
HIF3A-215ENST00000533145 CTDP1Q9Y5B0 961 aaPredicted RBP16.2■□□□□ 0.18
HIF3A-215ENST00000533145 KRT2P35908 639 aa16.19■□□□□ 0.18
HIF3A-215ENST00000533145 MRPL12P52815 198 aaKnown RBP16.19■□□□□ 0.18
HIF3A-215ENST00000533145 FOSBP53539 338 aa16.19■□□□□ 0.18
HIF3A-215ENST00000533145 TMEM132BQ14DG7 1078 aa16.19■□□□□ 0.18
HIF3A-215ENST00000533145 TKFCQ3LXA3 575 aa16.19■□□□□ 0.18
HIF3A-215ENST00000533145 CCDC174Q6PII3 467 aa16.19■□□□□ 0.18
HIF3A-215ENST00000533145 BRAPQ7Z569 592 aa16.19■□□□□ 0.18
HIF3A-215ENST00000533145 DIS3L2Q8IYB7 885 aaKnown RBP16.19■□□□□ 0.18
HIF3A-215ENST00000533145 REM2Q8IYK8 340 aaPredicted RBP16.19■□□□□ 0.18
HIF3A-215ENST00000533145 BLIDQ8IZY5 108 aa16.19■□□□□ 0.18
HIF3A-215ENST00000533145 FAM43AQ8N2R8 423 aa16.19■□□□□ 0.18
HIF3A-215ENST00000533145 AGBL1Q96MI9 1066 aa16.19■□□□□ 0.18
HIF3A-215ENST00000533145 RAVER2Q9HCJ3 691 aaKnown RBP16.19■□□□□ 0.18
HIF3A-215ENST00000533145 BRMS1Q9HCU9 246 aa16.19■□□□□ 0.18
HIF3A-215ENST00000533145 CCPG1Q9ULG6 757 aa16.19■□□□□ 0.18
HIF3A-215ENST00000533145 RABGAP1Q9Y3P9 1069 aa16.19■□□□□ 0.18
HIF3A-215ENST00000533145 TCHHQ07283 1943 aa16.19■□□□□ 0.18
HIF3A-215ENST00000533145 BTBD18B2RXH4 712 aa16.18■□□□□ 0.18
HIF3A-215ENST00000533145 STAT3P40763 770 aa16.18■□□□□ 0.18
HIF3A-215ENST00000533145 GHRHRQ02643 423 aa16.18■□□□□ 0.18
HIF3A-215ENST00000533145 SREBF2Q12772 1141 aa16.18■□□□□ 0.18
HIF3A-215ENST00000533145 SAMD1Q6SPF0 538 aaPredicted RBP16.18■□□□□ 0.18
HIF3A-215ENST00000533145 CLEC17AQ6ZS10 378 aa16.18■□□□□ 0.18
HIF3A-215ENST00000533145 TNFRSF25Q93038 417 aa16.18■□□□□ 0.18
HIF3A-215ENST00000533145 PSTPIP2Q9H939 334 aa16.18■□□□□ 0.18
HIF3A-215ENST00000533145 MAP3K20Q9NYL2 800 aaKnown RBP16.18■□□□□ 0.18
HIF3A-215ENST00000533145 ATP6V1DQ9Y5K8 247 aa16.18■□□□□ 0.18
HIF3A-215ENST00000533145 KIF28PB7ZC32 967 aa16.17■□□□□ 0.18
HIF3A-215ENST00000533145 PIK3CDO00329 1044 aa16.17■□□□□ 0.18
HIF3A-215ENST00000533145 OPLAHO14841 1288 aa16.17■□□□□ 0.18
HIF3A-215ENST00000533145 CNMDO75829 334 aa16.17■□□□□ 0.18
HIF3A-215ENST00000533145 GCLCP48506 637 aaPredicted RBP16.17■□□□□ 0.18
HIF3A-215ENST00000533145 CLK2P49760 499 aaKnown RBP16.17■□□□□ 0.18
HIF3A-215ENST00000533145 ADCY7P51828 1080 aa16.17■□□□□ 0.18
HIF3A-215ENST00000533145 NOGQ13253 232 aa16.17■□□□□ 0.18
HIF3A-215ENST00000533145 USH1GQ495M9 461 aa16.17■□□□□ 0.18
HIF3A-215ENST00000533145 MCTP2Q6DN12 878 aa16.17■□□□□ 0.18
HIF3A-215ENST00000533145 MCTP1Q6DN14 999 aa16.17■□□□□ 0.18
HIF3A-215ENST00000533145 CYP4F22Q6NT55 531 aa16.17■□□□□ 0.18
HIF3A-215ENST00000533145 IFNL1Q8IU54 200 aa16.17■□□□□ 0.18
HIF3A-215ENST00000533145 CPXCR1Q8N123 301 aa16.17■□□□□ 0.18
HIF3A-215ENST00000533145 OXER1Q8TDS5 423 aa16.17■□□□□ 0.18
HIF3A-215ENST00000533145 CUL5Q93034 780 aa16.17■□□□□ 0.18
HIF3A-215ENST00000533145 TEX13BQ9BXU2 312 aa16.17■□□□□ 0.18
HIF3A-215ENST00000533145 BTBD7Q9P203 1132 aa16.17■□□□□ 0.18
HIF3A-215ENST00000533145 RBPJLQ9UBG7 517 aa16.17■□□□□ 0.18
HIF3A-215ENST00000533145 RBBP6Q7Z6E9 1792 aaKnown RBP16.16■□□□□ 0.18
HIF3A-215ENST00000533145 IGF2BP3O00425 579 aaKnown RBP eCLIP16.16■□□□□ 0.18
HIF3A-215ENST00000533145 MEIS2O14770 477 aa16.16■□□□□ 0.18
HIF3A-215ENST00000533145 ATL3Q6DD88 541 aa16.16■□□□□ 0.18
HIF3A-215ENST00000533145 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.16■□□□□ 0.18
HIF3A-215ENST00000533145 FERMT3Q86UX7 667 aa16.16■□□□□ 0.18
HIF3A-215ENST00000533145 MCF2L2Q86YR7 1114 aa16.16■□□□□ 0.18
HIF3A-215ENST00000533145 RIOX2Q8IUF8 465 aa16.16■□□□□ 0.18
HIF3A-215ENST00000533145 NOSTRINQ8IVI9 506 aa16.16■□□□□ 0.18
HIF3A-215ENST00000533145 CLEC4DQ8WXI8 215 aa16.16■□□□□ 0.18
HIF3A-215ENST00000533145 TNPO1Q92973 898 aaKnown RBP16.16■□□□□ 0.18
HIF3A-215ENST00000533145 CAPNS2Q96L46 248 aa16.16■□□□□ 0.18
HIF3A-215ENST00000533145 PARK7Q99497 189 aaKnown RBP16.16■□□□□ 0.18
HIF3A-215ENST00000533145 SPATC1LQ9H0A9 340 aa16.16■□□□□ 0.18
HIF3A-215ENST00000533145 PCDHA6Q9UN73 950 aa16.16■□□□□ 0.18
HIF3A-215ENST00000533145 PCDHA8Q9Y5H6 950 aa16.16■□□□□ 0.18
HIF3A-215ENST00000533145 ADAMTS3O15072 1205 aa16.15■□□□□ 0.18
HIF3A-215ENST00000533145 SLC25A27O95847 323 aa16.15■□□□□ 0.18
HIF3A-215ENST00000533145 ALAS1P13196 640 aa16.15■□□□□ 0.18
HIF3A-215ENST00000533145 COPB2P35606 906 aa16.15■□□□□ 0.18
HIF3A-215ENST00000533145 NR5A1Q13285 461 aa16.15■□□□□ 0.18
HIF3A-215ENST00000533145 FOXD4L5Q5VV16 416 aaPredicted RBP16.15■□□□□ 0.18
HIF3A-215ENST00000533145 SNRNP48Q6IEG0 339 aaKnown RBP16.15■□□□□ 0.18
HIF3A-215ENST00000533145 JMYQ8N9B5 988 aa16.15■□□□□ 0.18
HIF3A-215ENST00000533145 CHST13Q8NET6 341 aa16.15■□□□□ 0.18
HIF3A-215ENST00000533145 FOXD4L4Q8WXT5 416 aaPredicted RBP16.15■□□□□ 0.18
HIF3A-215ENST00000533145 TRERF1Q96PN7 1200 aa16.15■□□□□ 0.18
HIF3A-215ENST00000533145 MORF4L1Q9UBU8 362 aa16.15■□□□□ 0.18
HIF3A-215ENST00000533145 RIPK3Q9Y572 518 aa16.15■□□□□ 0.18
HIF3A-215ENST00000533145 FOSP01100 380 aaPredicted RBP16.14■□□□□ 0.17
HIF3A-215ENST00000533145 CYP2C8P10632 490 aa16.14■□□□□ 0.17
HIF3A-215ENST00000533145 HSD17B4P51659 736 aa16.14■□□□□ 0.17
HIF3A-215ENST00000533145 GNL2Q13823 731 aaKnown RBP16.14■□□□□ 0.17
HIF3A-215ENST00000533145 Q3C1V9 767 aa16.14■□□□□ 0.17
HIF3A-215ENST00000533145 KRT25Q7Z3Z0 450 aa16.14■□□□□ 0.17
HIF3A-215ENST00000533145 REXO1Q8N1G1 1221 aaKnown RBP16.14■□□□□ 0.17
HIF3A-215ENST00000533145 SHCBP1Q8NEM2 672 aa16.14■□□□□ 0.17
HIF3A-215ENST00000533145 TXNRD2Q9NNW7 524 aa16.14■□□□□ 0.17
HIF3A-215ENST00000533145 FBXO40Q9UH90 709 aa16.14■□□□□ 0.17
HIF3A-215ENST00000533145 ADGRA2Q96PE1 1338 aa16.14■□□□□ 0.17
HIF3A-215ENST00000533145 ZNFX1Q9P2E3 1918 aaKnown RBP16.13■□□□□ 0.17
HIF3A-215ENST00000533145 GCOM1H8Y6P7 765 aaPredicted RBP16.13■□□□□ 0.17
HIF3A-215ENST00000533145 ALDH1A1P00352 501 aa16.13■□□□□ 0.17
HIF3A-215ENST00000533145 POLR2MP0CAP2 368 aa16.13■□□□□ 0.17
HIF3A-215ENST00000533145 MAP2K2P36507 400 aa16.13■□□□□ 0.17
HIF3A-215ENST00000533145 ERVK-9P63128 1117 aa16.13■□□□□ 0.17
HIF3A-215ENST00000533145 ERVK-24P63145 666 aa16.13■□□□□ 0.17
HIF3A-215ENST00000533145 AP3B2Q13367 1082 aa16.13■□□□□ 0.17
HIF3A-215ENST00000533145 MUM1L1Q5H9M0 696 aa16.13■□□□□ 0.17
HIF3A-215ENST00000533145 MYSM1Q5VVJ2 828 aa16.13■□□□□ 0.17
HIF3A-215ENST00000533145 PAXIP1Q6ZW49 1069 aaPredicted RBP16.13■□□□□ 0.17
HIF3A-215ENST00000533145 SMCR8Q8TEV9 937 aaPredicted RBP16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms