RNA–Protein interactions for RNA: ENST00000533018.1

PCF11-206, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-206ENST00000533018 AKNAD1Q5T1N1 836 aa20.98■□□□□ 0.95
PCF11-206ENST00000533018 CCSAPQ6IQ19 270 aaPredicted RBP20.98■□□□□ 0.95
PCF11-206ENST00000533018 PLEKHM2Q8IWE5 1019 aa20.98■□□□□ 0.95
PCF11-206ENST00000533018 EXOC6Q8TAG9 804 aa20.98■□□□□ 0.95
PCF11-206ENST00000533018 TCP11L1Q9NUJ3 509 aa20.98■□□□□ 0.95
PCF11-206ENST00000533018 CYP39A1Q9NYL5 469 aa20.98■□□□□ 0.95
PCF11-206ENST00000533018 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.97■□□□□ 0.95
PCF11-206ENST00000533018 ITGB8P26012 769 aa20.97■□□□□ 0.95
PCF11-206ENST00000533018 CST5P28325 142 aaPredicted RBP20.97■□□□□ 0.95
PCF11-206ENST00000533018 NUCB1Q02818 461 aa20.97■□□□□ 0.95
PCF11-206ENST00000533018 FAAP100Q0VG06 881 aa20.97■□□□□ 0.95
PCF11-206ENST00000533018 SYDE2Q5VT97 1194 aa20.97■□□□□ 0.95
PCF11-206ENST00000533018 CWC27Q6UX04 472 aaKnown RBP20.97■□□□□ 0.95
PCF11-206ENST00000533018 EEPD1Q7L9B9 569 aa20.97■□□□□ 0.95
PCF11-206ENST00000533018 ANKRD33Q7Z3H0 272 aa20.97■□□□□ 0.95
PCF11-206ENST00000533018 TOX2Q96NM4 488 aa20.97■□□□□ 0.95
PCF11-206ENST00000533018 RANBP17Q9H2T7 1088 aaKnown RBP20.97■□□□□ 0.95
PCF11-206ENST00000533018 RNF41Q9H4P4 317 aaPredicted RBP20.97■□□□□ 0.95
PCF11-206ENST00000533018 DIAPH3Q9NSV4 1193 aa20.97■□□□□ 0.95
PCF11-206ENST00000533018 STXBP5LQ9Y2K9 1186 aa20.97■□□□□ 0.95
PCF11-206ENST00000533018 DDX49Q9Y6V7 483 aaKnown RBP20.97■□□□□ 0.95
PCF11-206ENST00000533018 ELP1O95163 1332 aa20.97■□□□□ 0.95
PCF11-206ENST00000533018 ZMYM6O95789 1325 aa20.97■□□□□ 0.95
PCF11-206ENST00000533018 ZNF213O14771 459 aa20.96■□□□□ 0.95
PCF11-206ENST00000533018 KIAA0355O15063 1070 aa20.96■□□□□ 0.95
PCF11-206ENST00000533018 BEX3Q00994 111 aa20.96■□□□□ 0.95
PCF11-206ENST00000533018 ZNF697Q5TEC3 545 aa20.96■□□□□ 0.95
PCF11-206ENST00000533018 KATNBL1Q9H079 304 aa20.96■□□□□ 0.95
PCF11-206ENST00000533018 UPF3AQ9H1J1 476 aaKnown RBP20.96■□□□□ 0.95
PCF11-206ENST00000533018 MROH7Q68CQ1 1323 aa20.96■□□□□ 0.95
PCF11-206ENST00000533018 PCP11498 1178 aaKnown RBP20.95■□□□□ 0.94
PCF11-206ENST00000533018 FPGSQ05932 587 aa20.95■□□□□ 0.94
PCF11-206ENST00000533018 TBC1D10CQ8IV04 446 aa20.95■□□□□ 0.94
PCF11-206ENST00000533018 FBXO16Q8IX29 292 aaPredicted RBP20.95■□□□□ 0.94
PCF11-206ENST00000533018 ESR2Q92731 530 aa20.95■□□□□ 0.94
PCF11-206ENST00000533018 TTC14Q96N46 770 aa20.95■□□□□ 0.94
PCF11-206ENST00000533018 PURBQ96QR8 312 aaKnown RBP20.95■□□□□ 0.94
PCF11-206ENST00000533018 ZKSCAN3Q9BRR0 538 aa20.95■□□□□ 0.94
PCF11-206ENST00000533018 AP5M1Q9H0R1 490 aa20.95■□□□□ 0.94
PCF11-206ENST00000533018 A0A0U1RQG5 324 aaPredicted RBP20.94■□□□□ 0.94
PCF11-206ENST00000533018 PTPDC1A2A3K4 754 aa20.94■□□□□ 0.94
PCF11-206ENST00000533018 PDHBP11177 359 aa20.94■□□□□ 0.94
PCF11-206ENST00000533018 BAATQ14032 418 aaPredicted RBP20.94■□□□□ 0.94
PCF11-206ENST00000533018 FAM109BQ6ICB4 259 aaPredicted RBP20.94■□□□□ 0.94
PCF11-206ENST00000533018 BTNL9Q6UXG8 535 aa20.94■□□□□ 0.94
PCF11-206ENST00000533018 TLK2Q86UE8 772 aa20.94■□□□□ 0.94
PCF11-206ENST00000533018 RNPC3Q96LT9 517 aaKnown RBP20.94■□□□□ 0.94
PCF11-206ENST00000533018 OSBPL3Q9H4L5 887 aa20.94■□□□□ 0.94
PCF11-206ENST00000533018 PDGFCQ9NRA1 345 aa20.94■□□□□ 0.94
PCF11-206ENST00000533018 ARVCFO00192 962 aa20.93■□□□□ 0.94
PCF11-206ENST00000533018 DYNC1LI2O43237 492 aaPredicted RBP20.93■□□□□ 0.94
PCF11-206ENST00000533018 ADD3Q9UEY8 706 aaKnown RBP20.93■□□□□ 0.94
PCF11-206ENST00000533018 ASTN1O14525 1302 aa20.93■□□□□ 0.94
PCF11-206ENST00000533018 HIP1O00291 1037 aa20.92■□□□□ 0.94
PCF11-206ENST00000533018 NFIBO00712 420 aa20.92■□□□□ 0.94
PCF11-206ENST00000533018 TLR3O15455 904 aaKnown RBP20.92■□□□□ 0.94
PCF11-206ENST00000533018 ZEB2O60315 1214 aa20.92■□□□□ 0.94
PCF11-206ENST00000533018 TIMP1P01033 207 aa20.92■□□□□ 0.94
PCF11-206ENST00000533018 SMPD1P17405 629 aa20.92■□□□□ 0.94
PCF11-206ENST00000533018 CALML3P27482 149 aa20.92■□□□□ 0.94
PCF11-206ENST00000533018 EPHB4P54760 987 aa20.92■□□□□ 0.94
PCF11-206ENST00000533018 IQSEC1Q6DN90 963 aa20.92■□□□□ 0.94
PCF11-206ENST00000533018 CXCL17Q6UXB2 119 aa20.92■□□□□ 0.94
PCF11-206ENST00000533018 KIAA1211Q6ZU35 1233 aa20.92■□□□□ 0.94
PCF11-206ENST00000533018 GNEQ9Y223 722 aaKnown RBP20.92■□□□□ 0.94
PCF11-206ENST00000533018 NEDD4P46934 1319 aa20.92■□□□□ 0.94
PCF11-206ENST00000533018 UNC80Q8N2C7 3258 aa20.92■□□□□ 0.94
PCF11-206ENST00000533018 LCTP09848 1927 aa20.92■□□□□ 0.94
PCF11-206ENST00000533018 CTAGE5O15320 804 aa20.91■□□□□ 0.94
PCF11-206ENST00000533018 GOLGA8HP0CJ92 632 aa20.91■□□□□ 0.94
PCF11-206ENST00000533018 PTGS1P23219 599 aa20.91■□□□□ 0.94
PCF11-206ENST00000533018 CDK7P50613 346 aa20.91■□□□□ 0.94
PCF11-206ENST00000533018 ZNF543Q08ER8 600 aa20.91■□□□□ 0.94
PCF11-206ENST00000533018 FSCN1Q16658 493 aaKnown RBP20.91■□□□□ 0.94
PCF11-206ENST00000533018 IQCA1Q86XH1 822 aa20.91■□□□□ 0.94
PCF11-206ENST00000533018 GUCD1Q96NT3 240 aa20.91■□□□□ 0.94
PCF11-206ENST00000533018 CDH23Q9H251 3354 aa20.91■□□□□ 0.94
PCF11-206ENST00000533018 VTA1Q9NP79 307 aa20.91■□□□□ 0.94
PCF11-206ENST00000533018 LRRC37A2A6NM11 1700 aa20.9■□□□□ 0.94
PCF11-206ENST00000533018 KDM4AO75164 1064 aa20.9■□□□□ 0.94
PCF11-206ENST00000533018 ALDH5A1P51649 535 aaPredicted RBP20.9■□□□□ 0.94
PCF11-206ENST00000533018 SMAD3P84022 425 aaKnown RBP20.9■□□□□ 0.94
PCF11-206ENST00000533018 TAPT1Q6NXT6 567 aa20.9■□□□□ 0.94
PCF11-206ENST00000533018 RNF207Q6ZRF8 634 aa20.9■□□□□ 0.94
PCF11-206ENST00000533018 TBX21Q9UL17 535 aa20.9■□□□□ 0.94
PCF11-206ENST00000533018 PNMA2Q9UL42 364 aa20.9■□□□□ 0.94
PCF11-206ENST00000533018 DLL1O00548 723 aa20.89■□□□□ 0.93
PCF11-206ENST00000533018 CABYRO75952 493 aa20.89■□□□□ 0.93
PCF11-206ENST00000533018 IMMTQ16891 758 aaKnown RBP20.89■□□□□ 0.93
PCF11-206ENST00000533018 GPATCH4Q5T3I0 446 aaKnown RBP20.89■□□□□ 0.93
PCF11-206ENST00000533018 MFSD5Q6N075 450 aa20.89■□□□□ 0.93
PCF11-206ENST00000533018 SLC30A10Q6XR72 485 aa20.89■□□□□ 0.93
PCF11-206ENST00000533018 DGKHQ86XP1 1220 aa20.89■□□□□ 0.93
PCF11-206ENST00000533018 PPP1R12CQ9BZL4 782 aa20.89■□□□□ 0.93
PCF11-206ENST00000533018 UBA5Q9GZZ9 404 aa20.89■□□□□ 0.93
PCF11-206ENST00000533018 KAT14Q9H8E8 782 aa20.89■□□□□ 0.93
PCF11-206ENST00000533018 LAMA4Q16363 1823 aa20.89■□□□□ 0.93
PCF11-206ENST00000533018 NKX3-2P78367 333 aa20.88■□□□□ 0.93
PCF11-206ENST00000533018 ITGA7Q13683 1181 aa20.88■□□□□ 0.93
PCF11-206ENST00000533018 USH1GQ495M9 461 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms