RNA–Protein interactions for RNA: ENST00000532800.1

RPUSD4-207, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 2

Gene RPUSD4, Length 1,030 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-207ENST00000532800 TTBK2Q6IQ55 1244 aa20.2■□□□□ 0.82
RPUSD4-207ENST00000532800 ZNF589Q86UQ0 364 aaPredicted RBP20.2■□□□□ 0.82
RPUSD4-207ENST00000532800 VTI1AQ96AJ9 217 aa20.2■□□□□ 0.82
RPUSD4-207ENST00000532800 PURBQ96QR8 312 aaKnown RBP20.2■□□□□ 0.82
RPUSD4-207ENST00000532800 TOMM22Q9NS69 142 aa20.2■□□□□ 0.82
RPUSD4-207ENST00000532800 TIMP1P01033 207 aa20.19■□□□□ 0.82
RPUSD4-207ENST00000532800 FGAP02671 866 aa20.19■□□□□ 0.82
RPUSD4-207ENST00000532800 FGRP09769 529 aa20.19■□□□□ 0.82
RPUSD4-207ENST00000532800 SLC16A2P36021 539 aa20.19■□□□□ 0.82
RPUSD4-207ENST00000532800 TNFAIP2Q03169 654 aa20.19■□□□□ 0.82
RPUSD4-207ENST00000532800 CYP39A1Q9NYL5 469 aa20.19■□□□□ 0.82
RPUSD4-207ENST00000532800 CCPG1Q9ULG6 757 aa20.19■□□□□ 0.82
RPUSD4-207ENST00000532800 MROH7Q68CQ1 1323 aa20.19■□□□□ 0.82
RPUSD4-207ENST00000532800 A0A0U1RQG5 324 aaPredicted RBP20.18■□□□□ 0.82
RPUSD4-207ENST00000532800 ASB14A6NK59 587 aa20.18■□□□□ 0.82
RPUSD4-207ENST00000532800 ARVCFO00192 962 aa20.18■□□□□ 0.82
RPUSD4-207ENST00000532800 NKX3-2P78367 333 aa20.18■□□□□ 0.82
RPUSD4-207ENST00000532800 NMIQ13287 307 aaPredicted RBP20.18■□□□□ 0.82
RPUSD4-207ENST00000532800 MCMDC2Q4G0Z9 681 aa20.18■□□□□ 0.82
RPUSD4-207ENST00000532800 NSMFQ6X4W1 530 aa20.18■□□□□ 0.82
RPUSD4-207ENST00000532800 NOL8Q76FK4 1167 aaKnown RBP20.18■□□□□ 0.82
RPUSD4-207ENST00000532800 EEPD1Q7L9B9 569 aa20.18■□□□□ 0.82
RPUSD4-207ENST00000532800 TLK2Q86UE8 772 aa20.18■□□□□ 0.82
RPUSD4-207ENST00000532800 FBXO16Q8IX29 292 aaPredicted RBP20.18■□□□□ 0.82
RPUSD4-207ENST00000532800 FAM126BQ8IXS8 530 aa20.18■□□□□ 0.82
RPUSD4-207ENST00000532800 DCAF4Q8WV16 495 aa20.18■□□□□ 0.82
RPUSD4-207ENST00000532800 MYLIPQ8WY64 445 aa20.18■□□□□ 0.82
RPUSD4-207ENST00000532800 LNPKQ9C0E8 428 aa20.18■□□□□ 0.82
RPUSD4-207ENST00000532800 PDGFCQ9NRA1 345 aa20.18■□□□□ 0.82
RPUSD4-207ENST00000532800 GNEQ9Y223 722 aaKnown RBP20.18■□□□□ 0.82
RPUSD4-207ENST00000532800 FRMPD2Q68DX3 1309 aaPredicted RBP20.18■□□□□ 0.82
RPUSD4-207ENST00000532800 HSPD1P10809 573 aaKnown RBP20.17■□□□□ 0.82
RPUSD4-207ENST00000532800 HAND2P61296 217 aa20.17■□□□□ 0.82
RPUSD4-207ENST00000532800 TMEM63BQ5T3F8 832 aa20.17■□□□□ 0.82
RPUSD4-207ENST00000532800 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.17■□□□□ 0.82
RPUSD4-207ENST00000532800 TMEM47Q9BQJ4 181 aa20.17■□□□□ 0.82
RPUSD4-207ENST00000532800 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.17■□□□□ 0.82
RPUSD4-207ENST00000532800 RANBP17Q9H2T7 1088 aaKnown RBP20.17■□□□□ 0.82
RPUSD4-207ENST00000532800 ICAM1P05362 532 aa20.16■□□□□ 0.82
RPUSD4-207ENST00000532800 SMPD1P17405 629 aa20.16■□□□□ 0.82
RPUSD4-207ENST00000532800 SYDE2Q5VT97 1194 aa20.16■□□□□ 0.82
RPUSD4-207ENST00000532800 MFSD5Q6N075 450 aa20.16■□□□□ 0.82
RPUSD4-207ENST00000532800 TAPT1Q6NXT6 567 aa20.16■□□□□ 0.82
RPUSD4-207ENST00000532800 CXCL17Q6UXB2 119 aa20.16■□□□□ 0.82
RPUSD4-207ENST00000532800 PPP1R12CQ9BZL4 782 aa20.16■□□□□ 0.82
RPUSD4-207ENST00000532800 TRIM6-TRIM34B2RNG4 842 aa20.15■□□□□ 0.82
RPUSD4-207ENST00000532800 NFIBO00712 420 aa20.15■□□□□ 0.82
RPUSD4-207ENST00000532800 TOP1P11387 765 aaKnown RBP20.15■□□□□ 0.82
RPUSD4-207ENST00000532800 FSCN1Q16658 493 aaKnown RBP20.15■□□□□ 0.82
RPUSD4-207ENST00000532800 BTNL9Q6UXG8 535 aa20.15■□□□□ 0.82
RPUSD4-207ENST00000532800 C16orf59Q7L2K0 433 aa20.15■□□□□ 0.82
RPUSD4-207ENST00000532800 TBC1D10CQ8IV04 446 aa20.15■□□□□ 0.82
RPUSD4-207ENST00000532800 GPCPD1Q9NPB8 672 aa20.15■□□□□ 0.82
RPUSD4-207ENST00000532800 ZMYM6O95789 1325 aa20.15■□□□□ 0.82
RPUSD4-207ENST00000532800 CCDC171Q6TFL3 1326 aa20.15■□□□□ 0.82
RPUSD4-207ENST00000532800 DYNC1LI2O43237 492 aaPredicted RBP20.14■□□□□ 0.81
RPUSD4-207ENST00000532800 CSF2RAP15509 400 aa20.14■□□□□ 0.81
RPUSD4-207ENST00000532800 BAATQ14032 418 aaPredicted RBP20.14■□□□□ 0.81
RPUSD4-207ENST00000532800 MAFAQ8NHW3 353 aaPredicted RBP20.14■□□□□ 0.81
RPUSD4-207ENST00000532800 RILPL2Q969X0 211 aa20.14■□□□□ 0.81
RPUSD4-207ENST00000532800 TCP11L1Q9NUJ3 509 aa20.14■□□□□ 0.81
RPUSD4-207ENST00000532800 LAMA4Q16363 1823 aa20.13■□□□□ 0.81
RPUSD4-207ENST00000532800 GRIN2DO15399 1336 aa20.13■□□□□ 0.81
RPUSD4-207ENST00000532800 TLR3O15455 904 aaKnown RBP20.13■□□□□ 0.81
RPUSD4-207ENST00000532800 CD4P01730 458 aa20.13■□□□□ 0.81
RPUSD4-207ENST00000532800 PDHBP11177 359 aa20.13■□□□□ 0.81
RPUSD4-207ENST00000532800 DNAJB2P25686 324 aa20.13■□□□□ 0.81
RPUSD4-207ENST00000532800 PPIGQ13427 754 aaKnown RBP eCLIP20.13■□□□□ 0.815e-7■□□□□ 8.2
RPUSD4-207ENST00000532800 TMEM240Q5SV17 173 aa20.13■□□□□ 0.81
RPUSD4-207ENST00000532800 PIAS4Q8N2W9 510 aaPredicted RBP20.13■□□□□ 0.81
RPUSD4-207ENST00000532800 SLC43A3Q8NBI5 491 aa20.13■□□□□ 0.81
RPUSD4-207ENST00000532800 MORC4Q8TE76 937 aa20.13■□□□□ 0.81
RPUSD4-207ENST00000532800 COL25A1Q9BXS0 654 aaPredicted RBP20.13■□□□□ 0.81
RPUSD4-207ENST00000532800 AP5M1Q9H0R1 490 aa20.13■□□□□ 0.81
RPUSD4-207ENST00000532800 VCANP13611 3396 aa20.13■□□□□ 0.81
RPUSD4-207ENST00000532800 UMODL1Q5DID0 1318 aa20.12■□□□□ 0.81
RPUSD4-207ENST00000532800 TMEM265A0A087WTH1 108 aa20.12■□□□□ 0.81
RPUSD4-207ENST00000532800 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.12■□□□□ 0.81
RPUSD4-207ENST00000532800 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.12■□□□□ 0.81
RPUSD4-207ENST00000532800 ACRP10323 421 aa20.12■□□□□ 0.81
RPUSD4-207ENST00000532800 FOSL2P15408 326 aa20.12■□□□□ 0.81
RPUSD4-207ENST00000532800 CYP2C18P33260 490 aa20.12■□□□□ 0.81
RPUSD4-207ENST00000532800 ALDH5A1P51649 535 aaPredicted RBP20.12■□□□□ 0.81
RPUSD4-207ENST00000532800 IQSEC1Q6DN90 963 aa20.12■□□□□ 0.81
RPUSD4-207ENST00000532800 B4GALNT3Q6L9W6 998 aa20.12■□□□□ 0.81
RPUSD4-207ENST00000532800 SLC30A10Q6XR72 485 aa20.12■□□□□ 0.81
RPUSD4-207ENST00000532800 VTA1Q9NP79 307 aa20.12■□□□□ 0.81
RPUSD4-207ENST00000532800 NEDD4P46934 1319 aa20.11■□□□□ 0.81
RPUSD4-207ENST00000532800 PSMC6P62333 389 aa20.11■□□□□ 0.81
RPUSD4-207ENST00000532800 ZNF543Q08ER8 600 aa20.11■□□□□ 0.81
RPUSD4-207ENST00000532800 ITGA7Q13683 1181 aa20.11■□□□□ 0.81
RPUSD4-207ENST00000532800 AKNAD1Q5T1N1 836 aa20.11■□□□□ 0.81
RPUSD4-207ENST00000532800 KIAA1211Q6ZU35 1233 aa20.11■□□□□ 0.81
RPUSD4-207ENST00000532800 SMC5Q8IY18 1101 aa20.11■□□□□ 0.81
RPUSD4-207ENST00000532800 TMEM199Q8N511 208 aa20.11■□□□□ 0.81
RPUSD4-207ENST00000532800 CLEC4DQ8WXI8 215 aa20.11■□□□□ 0.81
RPUSD4-207ENST00000532800 PTPDC1A2A3K4 754 aa20.1■□□□□ 0.81
RPUSD4-207ENST00000532800 GRXCR1A8MXD5 290 aa20.1■□□□□ 0.81
RPUSD4-207ENST00000532800 CABYRO75952 493 aa20.1■□□□□ 0.81
RPUSD4-207ENST00000532800 SDSP20132 328 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms