RNA–Protein interactions for RNA: ENST00000532661.5

LTBP3-220, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 3

Gene LTBP3, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-220ENST00000532661 CCSAPQ6IQ19 270 aaPredicted RBP27.05■■□□□ 1.92
LTBP3-220ENST00000532661 PDLIM7Q9NR12 457 aa27.05■■□□□ 1.92
LTBP3-220ENST00000532661 GOLGA8HP0CJ92 632 aa27.04■■□□□ 1.92
LTBP3-220ENST00000532661 IMMTQ16891 758 aaKnown RBP27.04■■□□□ 1.92
LTBP3-220ENST00000532661 DGKHQ86XP1 1220 aa27.04■■□□□ 1.92
LTBP3-220ENST00000532661 TSEN34Q9BSV6 310 aaKnown RBP27.04■■□□□ 1.92
LTBP3-220ENST00000532661 CPVLQ9H3G5 476 aa27.04■■□□□ 1.92
LTBP3-220ENST00000532661 C11orf97A0A1B0GVM6 126 aaPredicted RBP27.03■■□□□ 1.92
LTBP3-220ENST00000532661 TRIM43BA6NCK2 446 aa27.03■■□□□ 1.92
LTBP3-220ENST00000532661 NFIBO00712 420 aa27.03■■□□□ 1.92
LTBP3-220ENST00000532661 C6orf222P0C671 652 aaPredicted RBP27.03■■□□□ 1.92
LTBP3-220ENST00000532661 BAATQ14032 418 aaPredicted RBP27.03■■□□□ 1.92
LTBP3-220ENST00000532661 LRIT3Q3SXY7 679 aa27.03■■□□□ 1.92
LTBP3-220ENST00000532661 TRIM43Q96BQ3 446 aaPredicted RBP27.03■■□□□ 1.92
LTBP3-220ENST00000532661 ZSWIM5Q9P217 1185 aa27.03■■□□□ 1.92
LTBP3-220ENST00000532661 MCM3APO60318 1980 aa27.02■■□□□ 1.92
LTBP3-220ENST00000532661 ASB14A6NK59 587 aa27.02■■□□□ 1.92
LTBP3-220ENST00000532661 UBA5Q9GZZ9 404 aa27.02■■□□□ 1.92
LTBP3-220ENST00000532661 CTNNA3Q9UI47 895 aa27.02■■□□□ 1.92
LTBP3-220ENST00000532661 PTGS1P23219 599 aa27.01■■□□□ 1.91
LTBP3-220ENST00000532661 GJA9P57773 515 aa27.01■■□□□ 1.91
LTBP3-220ENST00000532661 EEPD1Q7L9B9 569 aa27.01■■□□□ 1.91
LTBP3-220ENST00000532661 IQCA1Q86XH1 822 aa27.01■■□□□ 1.91
LTBP3-220ENST00000532661 PNMA1Q8ND90 353 aa27.01■■□□□ 1.91
LTBP3-220ENST00000532661 BADQ92934 168 aa27.01■■□□□ 1.91
LTBP3-220ENST00000532661 ZSCAN10Q96SZ4 725 aaPredicted RBP27.01■■□□□ 1.91
LTBP3-220ENST00000532661 UPF3AQ9H1J1 476 aaKnown RBP27.01■■□□□ 1.91
LTBP3-220ENST00000532661 STARD7Q9NQZ5 370 aa27.01■■□□□ 1.91
LTBP3-220ENST00000532661 MOXD2PA6NHM9 499 aa27■■□□□ 1.91
LTBP3-220ENST00000532661 PQBP1O60828 265 aaKnown RBP27■■□□□ 1.91
LTBP3-220ENST00000532661 TNFAIP2Q03169 654 aa27■■□□□ 1.91
LTBP3-220ENST00000532661 ENAHQ8N8S7 591 aaPredicted RBP27■■□□□ 1.91
LTBP3-220ENST00000532661 CLEC4DQ8WXI8 215 aa27■■□□□ 1.91
LTBP3-220ENST00000532661 ANKS1AQ92625 1134 aa27■■□□□ 1.91
LTBP3-220ENST00000532661 PDGFCQ9NRA1 345 aa27■■□□□ 1.91
LTBP3-220ENST00000532661 LAMA4Q16363 1823 aa27■■□□□ 1.91
LTBP3-220ENST00000532661 CTAGE5O15320 804 aa26.99■■□□□ 1.91
LTBP3-220ENST00000532661 ASGR1P07306 291 aa26.99■■□□□ 1.91
LTBP3-220ENST00000532661 CST5P28325 142 aaPredicted RBP26.99■■□□□ 1.91
LTBP3-220ENST00000532661 CCDC178Q5BJE1 867 aa26.99■■□□□ 1.91
LTBP3-220ENST00000532661 GNASQ5JWF2 1037 aa26.99■■□□□ 1.91
LTBP3-220ENST00000532661 TMEM63BQ5T3F8 832 aa26.99■■□□□ 1.91
LTBP3-220ENST00000532661 NOL8Q76FK4 1167 aaKnown RBP26.99■■□□□ 1.91
LTBP3-220ENST00000532661 NUP133Q8WUM0 1156 aa26.99■■□□□ 1.91
LTBP3-220ENST00000532661 KAT14Q9H8E8 782 aa26.99■■□□□ 1.91
LTBP3-220ENST00000532661 SPC25Q9HBM1 224 aa26.99■■□□□ 1.91
LTBP3-220ENST00000532661 TNKSO95271 1327 aa26.98■■□□□ 1.91
LTBP3-220ENST00000532661 PTPDC1A2A3K4 754 aa26.98■■□□□ 1.91
LTBP3-220ENST00000532661 ITGB8P26012 769 aa26.98■■□□□ 1.91
LTBP3-220ENST00000532661 CHMLP26374 656 aa26.98■■□□□ 1.91
LTBP3-220ENST00000532661 NT5C2P49902 561 aa26.98■■□□□ 1.91
LTBP3-220ENST00000532661 BEX3Q00994 111 aa26.98■■□□□ 1.91
LTBP3-220ENST00000532661 GPATCH4Q5T3I0 446 aaKnown RBP26.98■■□□□ 1.91
LTBP3-220ENST00000532661 SLC30A10Q6XR72 485 aa26.98■■□□□ 1.91
LTBP3-220ENST00000532661 FBXO16Q8IX29 292 aaPredicted RBP26.98■■□□□ 1.91
LTBP3-220ENST00000532661 KRT23Q9C075 422 aa26.98■■□□□ 1.91
LTBP3-220ENST00000532661 CLTBP09497 229 aa26.97■■□□□ 1.91
LTBP3-220ENST00000532661 SMPD1P17405 629 aa26.97■■□□□ 1.91
LTBP3-220ENST00000532661 PTH1RQ03431 593 aa26.97■■□□□ 1.91
LTBP3-220ENST00000532661 TAPT1Q6NXT6 567 aa26.97■■□□□ 1.91
LTBP3-220ENST00000532661 PCSK9Q8NBP7 692 aaKnown RBP26.97■■□□□ 1.91
LTBP3-220ENST00000532661 GNEQ9Y223 722 aaKnown RBP26.97■■□□□ 1.91
LTBP3-220ENST00000532661 LTBP2Q14767 1821 aa26.96■■□□□ 1.91
LTBP3-220ENST00000532661 CALML3P27482 149 aa26.96■■□□□ 1.91
LTBP3-220ENST00000532661 ALDH5A1P51649 535 aaPredicted RBP26.96■■□□□ 1.91
LTBP3-220ENST00000532661 CYB5R4Q7L1T6 521 aa26.96■■□□□ 1.91
LTBP3-220ENST00000532661 MORC4Q8TE76 937 aa26.96■■□□□ 1.91
LTBP3-220ENST00000532661 GLT1D1Q96MS3 346 aa26.96■■□□□ 1.91
LTBP3-220ENST00000532661 WDR19Q8NEZ3 1342 aa26.95■■□□□ 1.91
LTBP3-220ENST00000532661 RAD50Q92878 1312 aa26.95■■□□□ 1.91
LTBP3-220ENST00000532661 NKX3-2P78367 333 aa26.95■■□□□ 1.9
LTBP3-220ENST00000532661 FAAP100Q0VG06 881 aa26.95■■□□□ 1.9
LTBP3-220ENST00000532661 USH1GQ495M9 461 aa26.95■■□□□ 1.9
LTBP3-220ENST00000532661 RNF207Q6ZRF8 634 aa26.95■■□□□ 1.9
LTBP3-220ENST00000532661 Q7L0L9 218 aa26.95■■□□□ 1.9
LTBP3-220ENST00000532661 ANKRD33Q7Z3H0 272 aa26.95■■□□□ 1.9
LTBP3-220ENST00000532661 VTI1AQ96AJ9 217 aa26.95■■□□□ 1.9
LTBP3-220ENST00000532661 CNNM2Q9H8M5 875 aa26.95■■□□□ 1.9
LTBP3-220ENST00000532661 LAMA2P24043 3122 aaKnown RBP26.95■■□□□ 1.9
LTBP3-220ENST00000532661 LCTP09848 1927 aa26.94■■□□□ 1.9
LTBP3-220ENST00000532661 ELP1O95163 1332 aa26.94■■□□□ 1.9
LTBP3-220ENST00000532661 DYNC1LI2O43237 492 aaPredicted RBP26.94■■□□□ 1.9
LTBP3-220ENST00000532661 SHHQ15465 462 aa26.94■■□□□ 1.9
LTBP3-220ENST00000532661 C9orf50Q5SZB4 431 aa26.94■■□□□ 1.9
LTBP3-220ENST00000532661 TLK2Q86UE8 772 aa26.94■■□□□ 1.9
LTBP3-220ENST00000532661 UBAC1Q9BSL1 405 aa26.94■■□□□ 1.9
LTBP3-220ENST00000532661 TMEM39AQ9NV64 488 aa26.94■■□□□ 1.9
LTBP3-220ENST00000532661 ADD3Q9UEY8 706 aaKnown RBP26.94■■□□□ 1.9
LTBP3-220ENST00000532661 PNMA2Q9UL42 364 aa26.94■■□□□ 1.9
LTBP3-220ENST00000532661 KIAA0355O15063 1070 aa26.93■■□□□ 1.9
LTBP3-220ENST00000532661 CDK7P50613 346 aa26.93■■□□□ 1.9
LTBP3-220ENST00000532661 RPS6P62753 249 aaKnown RBP26.93■■□□□ 1.9
LTBP3-220ENST00000532661 CDC37Q16543 378 aaPredicted RBP26.93■■□□□ 1.9
LTBP3-220ENST00000532661 IQSEC1Q6DN90 963 aa26.93■■□□□ 1.9
LTBP3-220ENST00000532661 KIAA1211Q6ZU35 1233 aa26.93■■□□□ 1.9
LTBP3-220ENST00000532661 ADGRF4Q8IZF3 695 aa26.93■■□□□ 1.9
LTBP3-220ENST00000532661 RUFY2Q8WXA3 655 aa26.93■■□□□ 1.9
LTBP3-220ENST00000532661 TOX2Q96NM4 488 aa26.93■■□□□ 1.9
LTBP3-220ENST00000532661 VTA1Q9NP79 307 aa26.93■■□□□ 1.9
LTBP3-220ENST00000532661 TAF6LQ9Y6J9 622 aa26.93■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms