RNA–Protein interactions for RNA: ENST00000532602.1

PCDHA9-202, Transcript of protocadherin alpha 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA9, Length 6,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-202ENST00000532602 SASH1O94885 1247 aa16.28■□□□□ 0.2
PCDHA9-202ENST00000532602 PTGDRQ13258 359 aa16.28■□□□□ 0.2
PCDHA9-202ENST00000532602 SYMPKQ92797 1274 aaKnown RBP16.28■□□□□ 0.2
PCDHA9-202ENST00000532602 PPP1R16BQ96T49 567 aa16.28■□□□□ 0.2
PCDHA9-202ENST00000532602 SEPT9Q9UHD8 586 aaPredicted RBP16.28■□□□□ 0.2
PCDHA9-202ENST00000532602 COL15A1P39059 1388 aa16.27■□□□□ 0.2
PCDHA9-202ENST00000532602 EPHA10Q5JZY3 1008 aa16.27■□□□□ 0.2
PCDHA9-202ENST00000532602 HDXQ7Z353 690 aa16.27■□□□□ 0.2
PCDHA9-202ENST00000532602 MED10Q9BTT4 135 aa16.27■□□□□ 0.2
PCDHA9-202ENST00000532602 AMNQ9BXJ7 453 aa16.27■□□□□ 0.2
PCDHA9-202ENST00000532602 PLEKHA4Q9H4M7 779 aa16.27■□□□□ 0.2
PCDHA9-202ENST00000532602 BSDC1Q9NW68 430 aaPredicted RBP16.27■□□□□ 0.2
PCDHA9-202ENST00000532602 COL4A3BPQ9Y5P4 624 aa16.27■□□□□ 0.2
PCDHA9-202ENST00000532602 TPD52P55327 224 aaPredicted RBP16.27■□□□□ 0.2
PCDHA9-202ENST00000532602 TYW1BQ6NUM6 668 aa16.27■□□□□ 0.2
PCDHA9-202ENST00000532602 STAT1P42224 750 aa16.27■□□□□ 0.19
PCDHA9-202ENST00000532602 POLGP54098 1239 aaPredicted RBP16.27■□□□□ 0.19
PCDHA9-202ENST00000532602 PTPROQ16827 1216 aa16.27■□□□□ 0.19
PCDHA9-202ENST00000532602 CIAPIN1Q6FI81 312 aa16.27■□□□□ 0.19
PCDHA9-202ENST00000532602 ARHGEF1Q92888 912 aaKnown RBP16.27■□□□□ 0.19
PCDHA9-202ENST00000532602 EEF2KMTQ96G04 330 aa16.27■□□□□ 0.19
PCDHA9-202ENST00000532602 HESX1Q9UBX0 185 aa16.27■□□□□ 0.19
PCDHA9-202ENST00000532602 ABT1Q9ULW3 272 aaKnown RBP16.27■□□□□ 0.19
PCDHA9-202ENST00000532602 ARHGAP6O43182 974 aa16.27■□□□□ 0.19
PCDHA9-202ENST00000532602 OSBPP22059 807 aa16.27■□□□□ 0.19
PCDHA9-202ENST00000532602 PPP2R3AQ06190 1150 aa16.27■□□□□ 0.19
PCDHA9-202ENST00000532602 MAPK8IP2Q13387 824 aaPredicted RBP16.27■□□□□ 0.19
PCDHA9-202ENST00000532602 PPP2R5DQ14738 602 aa16.27■□□□□ 0.19
PCDHA9-202ENST00000532602 NBPF11Q86T75 865 aa16.27■□□□□ 0.19
PCDHA9-202ENST00000532602 MAP4K1Q92918 833 aa16.27■□□□□ 0.19
PCDHA9-202ENST00000532602 CFAP57Q96MR6 1250 aa16.27■□□□□ 0.19
PCDHA9-202ENST00000532602 XPOTO43592 962 aaKnown RBP16.27■□□□□ 0.19
PCDHA9-202ENST00000532602 CAPN2P17655 700 aa16.27■□□□□ 0.19
PCDHA9-202ENST00000532602 ZNF75DP51815 510 aa16.27■□□□□ 0.19
PCDHA9-202ENST00000532602 RRAGAQ7L523 313 aa16.27■□□□□ 0.19
PCDHA9-202ENST00000532602 RSPH3Q86UC2 560 aa16.27■□□□□ 0.19
PCDHA9-202ENST00000532602 IFT20Q8IY31 132 aa16.27■□□□□ 0.19
PCDHA9-202ENST00000532602 FAM76AQ8TAV0 307 aa16.27■□□□□ 0.19
PCDHA9-202ENST00000532602 RSPH14Q9UHP6 348 aa16.27■□□□□ 0.19
PCDHA9-202ENST00000532602 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.26■□□□□ 0.19
PCDHA9-202ENST00000532602 ADGRB3O60242 1522 aa16.26■□□□□ 0.19
PCDHA9-202ENST00000532602 LRRIQ4A6NIV6 560 aa16.26■□□□□ 0.19
PCDHA9-202ENST00000532602 ZEB2O60315 1214 aa16.26■□□□□ 0.19
PCDHA9-202ENST00000532602 CACNB1Q02641 598 aaPredicted RBP16.26■□□□□ 0.19
PCDHA9-202ENST00000532602 TFDP1Q14186 410 aa16.26■□□□□ 0.19
PCDHA9-202ENST00000532602 FYB2Q5VWT5 728 aa16.26■□□□□ 0.19
PCDHA9-202ENST00000532602 MMS19Q96T76 1030 aa16.26■□□□□ 0.19
PCDHA9-202ENST00000532602 C1orf112Q9NSG2 853 aa16.26■□□□□ 0.19
PCDHA9-202ENST00000532602 ABL1P00519 1130 aa16.26■□□□□ 0.19
PCDHA9-202ENST00000532602 CLCN1P35523 988 aa16.26■□□□□ 0.19
PCDHA9-202ENST00000532602 VPS52Q8N1B4 723 aa16.26■□□□□ 0.19
PCDHA9-202ENST00000532602 TRIM31Q9BZY9 425 aa16.26■□□□□ 0.19
PCDHA9-202ENST00000532602 ST7Q9NRC1 585 aa16.26■□□□□ 0.19
PCDHA9-202ENST00000532602 ADD3Q9UEY8 706 aaKnown RBP16.26■□□□□ 0.19
PCDHA9-202ENST00000532602 CEP104O60308 925 aa16.26■□□□□ 0.19
PCDHA9-202ENST00000532602 DLATP10515 647 aaKnown RBP16.26■□□□□ 0.19
PCDHA9-202ENST00000532602 MCAMP43121 646 aa16.26■□□□□ 0.19
PCDHA9-202ENST00000532602 ADKP55263 362 aaKnown RBP16.26■□□□□ 0.19
PCDHA9-202ENST00000532602 UBE2SQ16763 222 aa16.26■□□□□ 0.19
PCDHA9-202ENST00000532602 FAM178BQ8IXR5 827 aa16.26■□□□□ 0.19
PCDHA9-202ENST00000532602 INTS8Q75QN2 995 aaKnown RBP16.26■□□□□ 0.19
PCDHA9-202ENST00000532602 STAP2Q9UGK3 403 aa16.26■□□□□ 0.19
PCDHA9-202ENST00000532602 UBN2Q6ZU65 1347 aa16.25■□□□□ 0.19
PCDHA9-202ENST00000532602 GOLGA6CA6NDK9 693 aa16.25■□□□□ 0.19
PCDHA9-202ENST00000532602 GOLGA6BA6NDN3 693 aa16.25■□□□□ 0.19
PCDHA9-202ENST00000532602 GOLGA6DP0CG33 693 aa16.25■□□□□ 0.19
PCDHA9-202ENST00000532602 RPS6KA1Q15418 735 aa16.25■□□□□ 0.19
PCDHA9-202ENST00000532602 PEX26Q7Z412 305 aa16.25■□□□□ 0.19
PCDHA9-202ENST00000532602 SLC17A8Q8NDX2 589 aa16.25■□□□□ 0.19
PCDHA9-202ENST00000532602 METTL14Q9HCE5 456 aaKnown RBP16.25■□□□□ 0.19
PCDHA9-202ENST00000532602 GOLGA6AQ9NYA3 693 aa16.25■□□□□ 0.19
PCDHA9-202ENST00000532602 NDUFA8P51970 172 aa16.25■□□□□ 0.19
PCDHA9-202ENST00000532602 IRX5P78411 483 aaPredicted RBP16.25■□□□□ 0.19
PCDHA9-202ENST00000532602 PPP2R5AQ15172 486 aa16.25■□□□□ 0.19
PCDHA9-202ENST00000532602 ASPRV1Q53RT3 343 aa16.25■□□□□ 0.19
PCDHA9-202ENST00000532602 PDZD4Q76G19 769 aaPredicted RBP16.25■□□□□ 0.19
PCDHA9-202ENST00000532602 ARMC9Q7Z3E5 817 aa16.25■□□□□ 0.19
PCDHA9-202ENST00000532602 ZNF577Q9BSK1 485 aa16.25■□□□□ 0.19
PCDHA9-202ENST00000532602 TTLL3Q9Y4R7 772 aa16.25■□□□□ 0.19
PCDHA9-202ENST00000532602 CAMSAP1Q5T5Y3 1602 aa16.25■□□□□ 0.19
PCDHA9-202ENST00000532602 HSPA1LP34931 641 aa16.25■□□□□ 0.19
PCDHA9-202ENST00000532602 ADALQ6DHV7 355 aa16.25■□□□□ 0.19
PCDHA9-202ENST00000532602 TIGD1Q96MW7 591 aa16.25■□□□□ 0.19
PCDHA9-202ENST00000532602 ZNF277Q9NRM2 450 aaPredicted RBP16.25■□□□□ 0.19
PCDHA9-202ENST00000532602 PIM2Q9P1W9 311 aa16.25■□□□□ 0.19
PCDHA9-202ENST00000532602 ARMCX3Q9UH62 379 aaPredicted RBP16.25■□□□□ 0.19
PCDHA9-202ENST00000532602 MTMR6Q9Y217 621 aa16.25■□□□□ 0.19
PCDHA9-202ENST00000532602 CROCC2H7BZ55 1655 aa16.25■□□□□ 0.19
PCDHA9-202ENST00000532602 MORC3Q14149 939 aa16.25■□□□□ 0.19
PCDHA9-202ENST00000532602 CCDC51Q96ER9 411 aa16.25■□□□□ 0.19
PCDHA9-202ENST00000532602 SLF1Q9BQI6 1058 aa16.25■□□□□ 0.19
PCDHA9-202ENST00000532602 SERPINB13Q9UIV8 391 aa16.25■□□□□ 0.19
PCDHA9-202ENST00000532602 KIAA1024Q9UPX6 916 aa16.25■□□□□ 0.19
PCDHA9-202ENST00000532602 CYP2D6P10635 497 aa16.24■□□□□ 0.19
PCDHA9-202ENST00000532602 EVCP57679 992 aa16.24■□□□□ 0.19
PCDHA9-202ENST00000532602 DMP1Q13316 513 aaPredicted RBP16.24■□□□□ 0.19
PCDHA9-202ENST00000532602 SIRT2Q8IXJ6 389 aa16.24■□□□□ 0.19
PCDHA9-202ENST00000532602 ATP6V0A1Q93050 837 aa16.24■□□□□ 0.19
PCDHA9-202ENST00000532602 PSDA5PKW4 1024 aaPredicted RBP16.24■□□□□ 0.19
PCDHA9-202ENST00000532602 MEIS1O00470 390 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 178.4 ms