RNA–Protein interactions for RNA: ENST00000532370.1

CTSB-223, Transcript of cathepsin B, humanhuman

TSL 2

Gene CTSB, Length 693 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-223ENST00000532370 WDR19Q8NEZ3 1342 aa20.3■□□□□ 0.84
CTSB-223ENST00000532370 SEPT4O43236 478 aa20.3■□□□□ 0.84
CTSB-223ENST00000532370 ZNF865P0CJ78 1059 aaPredicted RBP20.3■□□□□ 0.84
CTSB-223ENST00000532370 NFXL1Q6ZNB6 911 aa20.3■□□□□ 0.84
CTSB-223ENST00000532370 ZNF467Q7Z7K2 595 aaPredicted RBP20.3■□□□□ 0.84
CTSB-223ENST00000532370 ZNF654Q8IZM8 581 aa20.3■□□□□ 0.84
CTSB-223ENST00000532370 KCNB2Q92953 911 aa20.3■□□□□ 0.84
CTSB-223ENST00000532370 TMEM87BQ96K49 555 aa20.3■□□□□ 0.84
CTSB-223ENST00000532370 PFASO15067 1338 aa20.29■□□□□ 0.84
CTSB-223ENST00000532370 SYNGAP1Q96PV0 1343 aa20.29■□□□□ 0.84
CTSB-223ENST00000532370 HSPA4P34932 840 aa20.29■□□□□ 0.84
CTSB-223ENST00000532370 EXOSC10Q01780 885 aaKnown RBP20.29■□□□□ 0.84
CTSB-223ENST00000532370 SLC30A10Q6XR72 485 aa20.29■□□□□ 0.84
CTSB-223ENST00000532370 RAB11FIP4Q86YS3 637 aa20.29■□□□□ 0.84
CTSB-223ENST00000532370 CCDC144CPQ8IYA2 1237 aa20.29■□□□□ 0.84
CTSB-223ENST00000532370 MSL3Q8N5Y2 521 aaKnown RBP20.29■□□□□ 0.84
CTSB-223ENST00000532370 MTA3Q9BTC8 594 aa20.29■□□□□ 0.84
CTSB-223ENST00000532370 CNPY2Q9Y2B0 182 aa20.29■□□□□ 0.84
CTSB-223ENST00000532370 PTPDC1A2A3K4 754 aa20.28■□□□□ 0.84
CTSB-223ENST00000532370 CYTH3O43739 400 aa20.28■□□□□ 0.84
CTSB-223ENST00000532370 PPP1R11O60927 126 aaPredicted RBP20.28■□□□□ 0.84
CTSB-223ENST00000532370 REC8O95072 547 aa20.28■□□□□ 0.84
CTSB-223ENST00000532370 CPA1P15085 419 aa20.28■□□□□ 0.84
CTSB-223ENST00000532370 CAPN2P17655 700 aa20.28■□□□□ 0.84
CTSB-223ENST00000532370 RXRAP19793 462 aa20.28■□□□□ 0.84
CTSB-223ENST00000532370 ARMCX2Q7L311 632 aa20.28■□□□□ 0.84
CTSB-223ENST00000532370 ANKLE1Q8NAG6 615 aa20.28■□□□□ 0.84
CTSB-223ENST00000532370 TBC1D5Q92609 795 aa20.28■□□□□ 0.84
CTSB-223ENST00000532370 LENG1Q96BZ8 264 aaPredicted RBP20.28■□□□□ 0.84
CTSB-223ENST00000532370 MTMR8Q96EF0 704 aa20.28■□□□□ 0.84
CTSB-223ENST00000532370 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.28■□□□□ 0.84
CTSB-223ENST00000532370 NRBP1Q9UHY1 535 aa20.28■□□□□ 0.84
CTSB-223ENST00000532370 PNMA2Q9UL42 364 aa20.28■□□□□ 0.84
CTSB-223ENST00000532370 SNX14Q9Y5W7 946 aa20.28■□□□□ 0.84
CTSB-223ENST00000532370 CCDC69A6NI79 296 aa20.27■□□□□ 0.84
CTSB-223ENST00000532370 MSCO60682 206 aa20.27■□□□□ 0.84
CTSB-223ENST00000532370 DDAH1O94760 285 aa20.27■□□□□ 0.84
CTSB-223ENST00000532370 CALML3P27482 149 aa20.27■□□□□ 0.84
CTSB-223ENST00000532370 LIFRP42702 1097 aa20.27■□□□□ 0.84
CTSB-223ENST00000532370 DHX32Q7L7V1 743 aaKnown RBP20.27■□□□□ 0.84
CTSB-223ENST00000532370 NECAB2Q7Z6G3 386 aa20.27■□□□□ 0.84
CTSB-223ENST00000532370 FBXO11Q86XK2 927 aa20.27■□□□□ 0.84
CTSB-223ENST00000532370 TMTC2Q8N394 836 aa20.27■□□□□ 0.84
CTSB-223ENST00000532370 PIGSQ96S52 555 aa20.27■□□□□ 0.84
CTSB-223ENST00000532370 RIOX1Q9H6W3 641 aa20.27■□□□□ 0.84
CTSB-223ENST00000532370 ZHX1Q9UKY1 873 aaPredicted RBP20.27■□□□□ 0.84
CTSB-223ENST00000532370 RPS6P62753 249 aaKnown RBP20.26■□□□□ 0.83
CTSB-223ENST00000532370 ACVR2BQ13705 512 aa20.26■□□□□ 0.83
CTSB-223ENST00000532370 KRT32Q14532 448 aa20.26■□□□□ 0.83
CTSB-223ENST00000532370 RNF207Q6ZRF8 634 aa20.26■□□□□ 0.83
CTSB-223ENST00000532370 HOMER1Q86YM7 354 aa20.26■□□□□ 0.83
CTSB-223ENST00000532370 PIBF1Q8WXW3 757 aa20.26■□□□□ 0.83
CTSB-223ENST00000532370 JAKMIP1Q96N16 626 aaKnown RBP20.26■□□□□ 0.83
CTSB-223ENST00000532370 KATNBL1Q9H079 304 aa20.26■□□□□ 0.83
CTSB-223ENST00000532370 PDE4DIPQ5VU43 2346 aa20.26■□□□□ 0.83
CTSB-223ENST00000532370 ZBTB5O15062 677 aa20.25■□□□□ 0.83
CTSB-223ENST00000532370 MYCNP04198 464 aaPredicted RBP20.25■□□□□ 0.83
CTSB-223ENST00000532370 GJC2Q5T442 439 aaPredicted RBP20.25■□□□□ 0.83
CTSB-223ENST00000532370 CMTR1Q8N1G2 835 aaKnown RBP20.25■□□□□ 0.83
CTSB-223ENST00000532370 DPF3Q92784 378 aa20.25■□□□□ 0.83
CTSB-223ENST00000532370 USP26Q9BXU7 913 aa20.25■□□□□ 0.83
CTSB-223ENST00000532370 C11orf49Q9H6J7 331 aa20.25■□□□□ 0.83
CTSB-223ENST00000532370 SLC12A7Q9Y666 1083 aa20.25■□□□□ 0.83
CTSB-223ENST00000532370 ABCB11O95342 1321 aa20.25■□□□□ 0.83
CTSB-223ENST00000532370 ASB14A6NK59 587 aa20.24■□□□□ 0.83
CTSB-223ENST00000532370 ADCY6O43306 1168 aa20.24■□□□□ 0.83
CTSB-223ENST00000532370 PLEKHA8P1O95397 391 aa20.24■□□□□ 0.83
CTSB-223ENST00000532370 EEPD1Q7L9B9 569 aa20.24■□□□□ 0.83
CTSB-223ENST00000532370 SGMS1Q86VZ5 419 aa20.24■□□□□ 0.83
CTSB-223ENST00000532370 CTCFLQ8NI51 663 aaPredicted RBP20.24■□□□□ 0.83
CTSB-223ENST00000532370 MAP3K14Q99558 947 aa20.24■□□□□ 0.83
CTSB-223ENST00000532370 AMNQ9BXJ7 453 aa20.24■□□□□ 0.83
CTSB-223ENST00000532370 ABHD16BQ9H3Z7 469 aa20.24■□□□□ 0.83
CTSB-223ENST00000532370 BRPF3Q9ULD4 1205 aa20.24■□□□□ 0.83
CTSB-223ENST00000532370 DNAH12Q6ZR08 3092 aa20.24■□□□□ 0.83
CTSB-223ENST00000532370 SMCHD1A6NHR9 2005 aa20.23■□□□□ 0.83
CTSB-223ENST00000532370 OPLAHO14841 1288 aa20.23■□□□□ 0.83
CTSB-223ENST00000532370 PGK1P00558 417 aa20.23■□□□□ 0.83
CTSB-223ENST00000532370 RARBP10826 455 aa20.23■□□□□ 0.83
CTSB-223ENST00000532370 COL6A1P12109 1028 aa20.23■□□□□ 0.83
CTSB-223ENST00000532370 AKR1A1P14550 325 aa20.23■□□□□ 0.83
CTSB-223ENST00000532370 KIF5BP33176 963 aa20.23■□□□□ 0.83
CTSB-223ENST00000532370 CCDC144BQ3MJ40 725 aa20.23■□□□□ 0.83
CTSB-223ENST00000532370 MICU3Q86XE3 530 aa20.23■□□□□ 0.83
CTSB-223ENST00000532370 SRBD1Q8N5C6 995 aaKnown RBP20.23■□□□□ 0.83
CTSB-223ENST00000532370 RGS22Q8NE09 1264 aa20.23■□□□□ 0.83
CTSB-223ENST00000532370 HTATIP2Q9BUP3 242 aa20.23■□□□□ 0.83
CTSB-223ENST00000532370 FAM184BQ9ULE4 1060 aa20.23■□□□□ 0.83
CTSB-223ENST00000532370 MRPL11Q9Y3B7 192 aaKnown RBP20.23■□□□□ 0.83
CTSB-223ENST00000532370 PCDHA1Q9Y5I3 950 aa20.23■□□□□ 0.83
CTSB-223ENST00000532370 ZNFX1Q9P2E3 1918 aaKnown RBP20.22■□□□□ 0.83
CTSB-223ENST00000532370 PNMA6FA0A0J9YX94 578 aa20.22■□□□□ 0.83
CTSB-223ENST00000532370 HMGB1P09429 215 aaKnown RBP20.22■□□□□ 0.83
CTSB-223ENST00000532370 ALDH5A1P51649 535 aaPredicted RBP20.22■□□□□ 0.83
CTSB-223ENST00000532370 LRRC41Q15345 812 aa20.22■□□□□ 0.83
CTSB-223ENST00000532370 FBXO16Q8IX29 292 aaPredicted RBP20.22■□□□□ 0.83
CTSB-223ENST00000532370 FANCBQ8NB91 859 aa20.22■□□□□ 0.83
CTSB-223ENST00000532370 SYTL5Q8TDW5 730 aaPredicted RBP20.22■□□□□ 0.83
CTSB-223ENST00000532370 XPNPEP3Q9NQH7 507 aa20.22■□□□□ 0.83
CTSB-223ENST00000532370 PDGFCQ9NRA1 345 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms