RNA–Protein interactions for RNA: ENST00000531858.1

AC055878.1-201, humanhuman

TSL 3 BASIC

Gene AC055878.1, Length 281 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055878.1-201ENST00000531858 CCDC174Q6PII3 467 aa5.38□□□□□ -1.55
AC055878.1-201ENST00000531858 FKBP9P1Q75LS8 142 aa5.38□□□□□ -1.55
AC055878.1-201ENST00000531858 CHST15Q7LFX5 561 aaPredicted RBP5.38□□□□□ -1.55
AC055878.1-201ENST00000531858 SRGAP1Q7Z6B7 1085 aa5.38□□□□□ -1.55
AC055878.1-201ENST00000531858 PPFIBP1Q86W92 1011 aa5.38□□□□□ -1.55
AC055878.1-201ENST00000531858 ZNF354CQ86Y25 554 aa5.38□□□□□ -1.55
AC055878.1-201ENST00000531858 TMEM192Q8IY95 271 aa5.38□□□□□ -1.55
AC055878.1-201ENST00000531858 PHACTR4Q8IZ21 702 aa5.38□□□□□ -1.55
AC055878.1-201ENST00000531858 ARHGEF39Q8N4T4 335 aa5.38□□□□□ -1.55
AC055878.1-201ENST00000531858 GPATCH11Q8N954 259 aa5.38□□□□□ -1.55
AC055878.1-201ENST00000531858 SMC1BQ8NDV3 1235 aa5.38□□□□□ -1.55
AC055878.1-201ENST00000531858 FAM13CQ8NE31 585 aa5.38□□□□□ -1.55
AC055878.1-201ENST00000531858 PPP1R14AQ96A00 147 aa5.38□□□□□ -1.55
AC055878.1-201ENST00000531858 ACSF2Q96CM8 615 aaPredicted RBP5.38□□□□□ -1.55
AC055878.1-201ENST00000531858 AHCYL2Q96HN2 611 aaKnown RBP5.38□□□□□ -1.55
AC055878.1-201ENST00000531858 ZFYVE21Q9BQ24 234 aa5.38□□□□□ -1.55
AC055878.1-201ENST00000531858 NMRK2Q9NPI5 230 aa5.38□□□□□ -1.55
AC055878.1-201ENST00000531858 APEX2Q9UBZ4 518 aa5.38□□□□□ -1.55
AC055878.1-201ENST00000531858 PHTF1Q9UMS5 762 aa5.38□□□□□ -1.55
AC055878.1-201ENST00000531858 PTPN22Q9Y2R2 807 aa5.38□□□□□ -1.55
AC055878.1-201ENST00000531858 FRMPD2Q68DX3 1309 aaPredicted RBP5.38□□□□□ -1.55
AC055878.1-201ENST00000531858 SENP3-EIF4A1A0A087X0R7 540 aa5.37□□□□□ -1.55
AC055878.1-201ENST00000531858 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.37□□□□□ -1.55
AC055878.1-201ENST00000531858 KRBA1A5PL33 1030 aa5.37□□□□□ -1.55
AC055878.1-201ENST00000531858 TRIM75PA6NK02 468 aa5.37□□□□□ -1.55
AC055878.1-201ENST00000531858 BNIP3LO60238 219 aa5.37□□□□□ -1.55
AC055878.1-201ENST00000531858 SLFN14P0C7P3 912 aa5.37□□□□□ -1.55
AC055878.1-201ENST00000531858 ADCYAP1R1P41586 468 aa5.37□□□□□ -1.55
AC055878.1-201ENST00000531858 GRIA2P42262 883 aa5.37□□□□□ -1.55
AC055878.1-201ENST00000531858 SARSP49591 514 aaKnown RBP5.37□□□□□ -1.55
AC055878.1-201ENST00000531858 IL2P60568 153 aa5.37□□□□□ -1.55
AC055878.1-201ENST00000531858 ERVK-24P63145 666 aa5.37□□□□□ -1.55
AC055878.1-201ENST00000531858 ADCY1Q08828 1119 aa5.37□□□□□ -1.55
AC055878.1-201ENST00000531858 C19orf57Q0VDD7 668 aa5.37□□□□□ -1.55
AC055878.1-201ENST00000531858 GRM3Q14832 879 aa5.37□□□□□ -1.55
AC055878.1-201ENST00000531858 POU4F3Q15319 338 aa5.37□□□□□ -1.55
AC055878.1-201ENST00000531858 ABCB5Q2M3G0 1257 aa5.37□□□□□ -1.55
AC055878.1-201ENST00000531858 ATP13A4Q4VNC1 1196 aa5.37□□□□□ -1.55
AC055878.1-201ENST00000531858 PRR16Q569H4 304 aa5.37□□□□□ -1.55
AC055878.1-201ENST00000531858 ZC3H12AQ5D1E8 599 aaKnown RBP5.37□□□□□ -1.55
AC055878.1-201ENST00000531858 L1TD1Q5T7N2 865 aaKnown RBP5.37□□□□□ -1.55
AC055878.1-201ENST00000531858 ZNF280DQ6N043 979 aa5.37□□□□□ -1.55
AC055878.1-201ENST00000531858 FOXR1Q6PIV2 292 aa5.37□□□□□ -1.55
AC055878.1-201ENST00000531858 ADAT2Q7Z6V5 191 aaKnown RBP5.37□□□□□ -1.55
AC055878.1-201ENST00000531858 SAPCD2Q86UD0 394 aa5.37□□□□□ -1.55
AC055878.1-201ENST00000531858 HID1Q8IV36 788 aa5.37□□□□□ -1.55
AC055878.1-201ENST00000531858 CCDC144CPQ8IYA2 1237 aa5.37□□□□□ -1.55
AC055878.1-201ENST00000531858 CMTR2Q8IYT2 770 aaKnown RBP5.37□□□□□ -1.55
AC055878.1-201ENST00000531858 DCAF4Q8WV16 495 aa5.37□□□□□ -1.55
AC055878.1-201ENST00000531858 HSPBAP1Q96EW2 488 aa5.37□□□□□ -1.55
AC055878.1-201ENST00000531858 TRMT2BQ96GJ1 504 aaKnown RBP5.37□□□□□ -1.55
AC055878.1-201ENST00000531858 SCLT1Q96NL6 688 aa5.37□□□□□ -1.55
AC055878.1-201ENST00000531858 KRTAP4-12Q9BQ66 201 aa5.37□□□□□ -1.55
AC055878.1-201ENST00000531858 INO80BQ9C086 356 aaPredicted RBP5.37□□□□□ -1.55
AC055878.1-201ENST00000531858 UBE2OQ9C0C9 1292 aaKnown RBP5.37□□□□□ -1.55
AC055878.1-201ENST00000531858 CSRNP2Q9H175 543 aa5.37□□□□□ -1.55
AC055878.1-201ENST00000531858 PRR13Q9NZ81 148 aa5.37□□□□□ -1.55
AC055878.1-201ENST00000531858 GTF2IRD1Q9UHL9 959 aa5.37□□□□□ -1.55
AC055878.1-201ENST00000531858 AKT3Q9Y243 479 aa5.37□□□□□ -1.55
AC055878.1-201ENST00000531858 ZKSCAN5Q9Y2L8 839 aa5.37□□□□□ -1.55
AC055878.1-201ENST00000531858 IGF1RP08069 1367 aa5.37□□□□□ -1.55
AC055878.1-201ENST00000531858 FAM86C2PA6NEL3 165 aa5.36□□□□□ -1.55
AC055878.1-201ENST00000531858 PRRT4C9JH25 899 aa5.36□□□□□ -1.55
AC055878.1-201ENST00000531858 M0R2C6 588 aa5.36□□□□□ -1.55
AC055878.1-201ENST00000531858 APAF1O14727 1248 aa5.36□□□□□ -1.55
AC055878.1-201ENST00000531858 UBOX5O94941 541 aa5.36□□□□□ -1.55
AC055878.1-201ENST00000531858 HRGP04196 525 aa5.36□□□□□ -1.55
AC055878.1-201ENST00000531858 TP53P04637 393 aaPredicted RBP5.36□□□□□ -1.55
AC055878.1-201ENST00000531858 ASGR2P07307 311 aa5.36□□□□□ -1.55
AC055878.1-201ENST00000531858 SETSIPP0DME0 302 aa5.36□□□□□ -1.55
AC055878.1-201ENST00000531858 ITGA4P13612 1032 aa5.36□□□□□ -1.55
AC055878.1-201ENST00000531858 POLR2BP30876 1174 aaKnown RBP5.36□□□□□ -1.55
AC055878.1-201ENST00000531858 GBP1P32455 592 aa5.36□□□□□ -1.55
AC055878.1-201ENST00000531858 CAP2P40123 477 aa5.36□□□□□ -1.55
AC055878.1-201ENST00000531858 HALP42357 657 aa5.36□□□□□ -1.55
AC055878.1-201ENST00000531858 ID4P47928 161 aa5.36□□□□□ -1.55
AC055878.1-201ENST00000531858 GFRA1P56159 465 aa5.36□□□□□ -1.55
AC055878.1-201ENST00000531858 ETF1P62495 437 aaKnown RBP5.36□□□□□ -1.55
AC055878.1-201ENST00000531858 GSTM4Q03013 218 aa5.36□□□□□ -1.55
AC055878.1-201ENST00000531858 MLLT1Q03111 559 aaPredicted RBP5.36□□□□□ -1.55
AC055878.1-201ENST00000531858 CHAF1AQ13111 956 aaPredicted RBP5.36□□□□□ -1.55
AC055878.1-201ENST00000531858 TTLL5Q6EMB2 1281 aa5.36□□□□□ -1.55
AC055878.1-201ENST00000531858 FAM117BQ6P1L5 589 aa5.36□□□□□ -1.55
AC055878.1-201ENST00000531858 RSPO2Q6UXX9 243 aaPredicted RBP5.36□□□□□ -1.55
AC055878.1-201ENST00000531858 HFE2Q6ZVN8 426 aa5.36□□□□□ -1.55
AC055878.1-201ENST00000531858 CATIPQ7Z7H3 387 aa5.36□□□□□ -1.55
AC055878.1-201ENST00000531858 PNMA8AQ86V59 439 aaPredicted RBP5.36□□□□□ -1.55
AC055878.1-201ENST00000531858 FAM186BQ8IYM0 893 aa5.36□□□□□ -1.55
AC055878.1-201ENST00000531858 KCT2Q8NC54 265 aa5.36□□□□□ -1.55
AC055878.1-201ENST00000531858 C1orf162Q8NEQ5 155 aaPredicted RBP5.36□□□□□ -1.55
AC055878.1-201ENST00000531858 TNFRSF25Q93038 417 aa5.36□□□□□ -1.55
AC055878.1-201ENST00000531858 FAXDC2Q96IV6 333 aa5.36□□□□□ -1.55
AC055878.1-201ENST00000531858 TMEM87BQ96K49 555 aa5.36□□□□□ -1.55
AC055878.1-201ENST00000531858 CDC5LQ99459 802 aaKnown RBP5.36□□□□□ -1.55
AC055878.1-201ENST00000531858 MYD88Q99836 296 aa5.36□□□□□ -1.55
AC055878.1-201ENST00000531858 NRSN2Q9GZP1 204 aa5.36□□□□□ -1.55
AC055878.1-201ENST00000531858 TMX4Q9H1E5 349 aaPredicted RBP5.36□□□□□ -1.55
AC055878.1-201ENST00000531858 CCDC86Q9H6F5 360 aaKnown RBP5.36□□□□□ -1.55
AC055878.1-201ENST00000531858 CABP5Q9NP86 173 aa5.36□□□□□ -1.55
AC055878.1-201ENST00000531858 PRDM6Q9NQX0 595 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms