RNA–Protein interactions for RNA: ENST00000531842.1

USF1-210, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-210ENST00000531842 GNEQ9Y223 722 aaKnown RBP10.76□□□□□ -0.69
USF1-210ENST00000531842 SLC4A7Q9Y6M7 1214 aa10.76□□□□□ -0.69
USF1-210ENST00000531842 WDFY4Q6ZS81 3184 aa10.75□□□□□ -0.69
USF1-210ENST00000531842 ZBED4O75132 1171 aa10.75□□□□□ -0.69
USF1-210ENST00000531842 IFIT2P09913 472 aaKnown RBP10.75□□□□□ -0.69
USF1-210ENST00000531842 ATP2A2P16615 1042 aaKnown RBP10.75□□□□□ -0.69
USF1-210ENST00000531842 FSCN1Q16658 493 aaKnown RBP10.75□□□□□ -0.69
USF1-210ENST00000531842 MUM1L1Q5H9M0 696 aa10.75□□□□□ -0.69
USF1-210ENST00000531842 CCDC174Q6PII3 467 aa10.75□□□□□ -0.69
USF1-210ENST00000531842 ZNF467Q7Z7K2 595 aaPredicted RBP10.75□□□□□ -0.69
USF1-210ENST00000531842 ERC1Q8IUD2 1116 aa10.75□□□□□ -0.69
USF1-210ENST00000531842 MSL3Q8N5Y2 521 aaKnown RBP10.75□□□□□ -0.69
USF1-210ENST00000531842 PRPF38AQ8NAV1 312 aaKnown RBP10.75□□□□□ -0.69
USF1-210ENST00000531842 ARNTL2Q8WYA1 636 aa10.75□□□□□ -0.69
USF1-210ENST00000531842 CEP95Q96GE4 821 aa10.75□□□□□ -0.69
USF1-210ENST00000531842 SPC25Q9HBM1 224 aa10.75□□□□□ -0.69
USF1-210ENST00000531842 SLC38A10Q9HBR0 1119 aa10.75□□□□□ -0.69
USF1-210ENST00000531842 EPB41L4AQ9HCS5 686 aaPredicted RBP10.75□□□□□ -0.69
USF1-210ENST00000531842 A1CFQ9NQ94 594 aaKnown RBP10.75□□□□□ -0.69
USF1-210ENST00000531842 ZNF536O15090 1300 aa10.75□□□□□ -0.69
USF1-210ENST00000531842 PIEZO1Q92508 2521 aa10.75□□□□□ -0.69
USF1-210ENST00000531842 IGKV6D-41A0A0C4DH26 115 aa10.74□□□□□ -0.69
USF1-210ENST00000531842 GSG1L2A8MUP6 293 aa10.74□□□□□ -0.69
USF1-210ENST00000531842 COPB2P35606 906 aa10.74□□□□□ -0.69
USF1-210ENST00000531842 TSHZ3Q63HK5 1081 aa10.74□□□□□ -0.69
USF1-210ENST00000531842 TAPT1Q6NXT6 567 aa10.74□□□□□ -0.69
USF1-210ENST00000531842 CLASRPQ8N2M8 674 aaKnown RBP10.74□□□□□ -0.69
USF1-210ENST00000531842 FAM133AQ8N9E0 248 aa10.74□□□□□ -0.69
USF1-210ENST00000531842 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.74□□□□□ -0.69
USF1-210ENST00000531842 NYAP2Q9P242 653 aa10.74□□□□□ -0.69
USF1-210ENST00000531842 CTDP1Q9Y5B0 961 aaPredicted RBP10.74□□□□□ -0.69
USF1-210ENST00000531842 PCDHA11Q9Y5I1 949 aa10.74□□□□□ -0.69
USF1-210ENST00000531842 SCN10AQ9Y5Y9 1956 aa10.74□□□□□ -0.69
USF1-210ENST00000531842 C5orf42Q9H799 3197 aa10.73□□□□□ -0.69
USF1-210ENST00000531842 LCHNA4D1U4 455 aa10.73□□□□□ -0.69
USF1-210ENST00000531842 TMEM232C9JQI7 657 aa10.73□□□□□ -0.69
USF1-210ENST00000531842 ATP2A1O14983 1001 aa10.73□□□□□ -0.69
USF1-210ENST00000531842 ERC2O15083 957 aa10.73□□□□□ -0.69
USF1-210ENST00000531842 TLL1O43897 1013 aa10.73□□□□□ -0.69
USF1-210ENST00000531842 ALAS1P13196 640 aa10.73□□□□□ -0.69
USF1-210ENST00000531842 HNRNPUQ00839 825 aaKnown RBP eCLIP10.73□□□□□ -0.69
USF1-210ENST00000531842 AMOTL1Q8IY63 956 aa10.73□□□□□ -0.69
USF1-210ENST00000531842 STRBPQ96SI9 672 aaKnown RBP10.73□□□□□ -0.69
USF1-210ENST00000531842 HAUS7Q99871 368 aa10.73□□□□□ -0.69
USF1-210ENST00000531842 C1QTNF1Q9BXJ1 281 aa10.73□□□□□ -0.69
USF1-210ENST00000531842 ALDH8A1Q9H2A2 487 aaPredicted RBP10.73□□□□□ -0.69
USF1-210ENST00000531842 MKNK2Q9HBH9 465 aa10.73□□□□□ -0.69
USF1-210ENST00000531842 INCENPQ9NQS7 918 aa10.73□□□□□ -0.69
USF1-210ENST00000531842 RNF146Q9NTX7 359 aa10.73□□□□□ -0.69
USF1-210ENST00000531842 MTMR7Q9Y216 660 aa10.73□□□□□ -0.69
USF1-210ENST00000531842 MYO7AQ13402 2215 aa10.72□□□□□ -0.69
USF1-210ENST00000531842 M0R2C6 588 aa10.72□□□□□ -0.69
USF1-210ENST00000531842 MYL3P08590 195 aa10.72□□□□□ -0.69
USF1-210ENST00000531842 ATP5JP18859 108 aa10.72□□□□□ -0.69
USF1-210ENST00000531842 TAP1Q03518 808 aa10.72□□□□□ -0.69
USF1-210ENST00000531842 GRB10Q13322 594 aa10.72□□□□□ -0.69
USF1-210ENST00000531842 TCTN1Q2MV58 587 aa10.72□□□□□ -0.69
USF1-210ENST00000531842 TMEM67Q5HYA8 995 aa10.72□□□□□ -0.69
USF1-210ENST00000531842 SLFN13Q68D06 897 aa10.72□□□□□ -0.69
USF1-210ENST00000531842 TMED8Q6PL24 325 aaPredicted RBP10.72□□□□□ -0.69
USF1-210ENST00000531842 KCTD1Q719H9 257 aa10.72□□□□□ -0.69
USF1-210ENST00000531842 CHST13Q8NET6 341 aa10.72□□□□□ -0.69
USF1-210ENST00000531842 GDPD5Q8WTR4 605 aa10.72□□□□□ -0.69
USF1-210ENST00000531842 OSBP2Q969R2 916 aa10.72□□□□□ -0.69
USF1-210ENST00000531842 KIF1BPQ96EK5 621 aa10.72□□□□□ -0.69
USF1-210ENST00000531842 TRERF1Q96PN7 1200 aa10.72□□□□□ -0.69
USF1-210ENST00000531842 AP5M1Q9H0R1 490 aa10.72□□□□□ -0.69
USF1-210ENST00000531842 TRIOO75962 3097 aa10.72□□□□□ -0.69
USF1-210ENST00000531842 NMT2O60551 498 aa10.71□□□□□ -0.69
USF1-210ENST00000531842 LPXNO60711 386 aa10.71□□□□□ -0.69
USF1-210ENST00000531842 TNKSO95271 1327 aa10.71□□□□□ -0.69
USF1-210ENST00000531842 BMP3P12645 472 aa10.71□□□□□ -0.69
USF1-210ENST00000531842 SIP14410 1827 aa10.71□□□□□ -0.69
USF1-210ENST00000531842 MCCP23508 829 aa10.71□□□□□ -0.69
USF1-210ENST00000531842 CHMP4BP1P59074 171 aa10.71□□□□□ -0.69
USF1-210ENST00000531842 NKX3-2P78367 333 aa10.71□□□□□ -0.69
USF1-210ENST00000531842 UBE3CQ15386 1083 aa10.71□□□□□ -0.69
USF1-210ENST00000531842 ATG2AQ2TAZ0 1938 aa10.71□□□□□ -0.69
USF1-210ENST00000531842 FAM47CQ5HY64 1035 aa10.71□□□□□ -0.69
USF1-210ENST00000531842 NSMFQ6X4W1 530 aa10.71□□□□□ -0.69
USF1-210ENST00000531842 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.71□□□□□ -0.69
USF1-210ENST00000531842 ALYREFQ86V81 257 aaKnown RBP10.71□□□□□ -0.69
USF1-210ENST00000531842 ANKS1AQ92625 1134 aa10.71□□□□□ -0.69
USF1-210ENST00000531842 COPS5Q92905 334 aa10.71□□□□□ -0.69
USF1-210ENST00000531842 SEC62Q99442 399 aaKnown RBP10.71□□□□□ -0.69
USF1-210ENST00000531842 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.71□□□□□ -0.694e-8■■■■■ 30.4
USF1-210ENST00000531842 TSPYL2Q9H2G4 693 aaPredicted RBP10.71□□□□□ -0.69
USF1-210ENST00000531842 MTIF3Q9H2K0 278 aaKnown RBP10.71□□□□□ -0.69
USF1-210ENST00000531842 ACAD9Q9H845 621 aa10.71□□□□□ -0.69
USF1-210ENST00000531842 MTMR4Q9NYA4 1195 aa10.71□□□□□ -0.69
USF1-210ENST00000531842 ARPP21Q9UBL0 812 aaPredicted RBP10.71□□□□□ -0.69
USF1-210ENST00000531842 FEM1BQ9UK73 627 aa10.71□□□□□ -0.69
USF1-210ENST00000531842 MTUS1Q9ULD2 1270 aa10.71□□□□□ -0.69
USF1-210ENST00000531842 COG6Q9Y2V7 657 aa10.71□□□□□ -0.69
USF1-210ENST00000531842 MYH7BA7E2Y1 1941 aa10.7□□□□□ -0.7
USF1-210ENST00000531842 IKQ13123 557 aaPredicted RBP10.7□□□□□ -0.7
USF1-210ENST00000531842 SBK1Q52WX2 424 aa10.7□□□□□ -0.7
USF1-210ENST00000531842 TMEM31Q5JXX7 168 aa10.7□□□□□ -0.7
USF1-210ENST00000531842 KIAA1211Q6ZU35 1233 aa10.7□□□□□ -0.7
USF1-210ENST00000531842 RPUSD2Q8IZ73 545 aaKnown RBP10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms