RNA–Protein interactions for RNA: ENST00000531709.6

NXF1-211, Transcript of nuclear RNA export factor 1, humanhuman

TSL 1 (best) BASIC

Gene NXF1, Length 4,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-211ENST00000531709 USP17L2Q6R6M4 530 aa12.62□□□□□ -0.39
NXF1-211ENST00000531709 MED15Q96RN5 788 aa12.62□□□□□ -0.39
NXF1-211ENST00000531709 MINPP1Q9UNW1 487 aa12.62□□□□□ -0.39
NXF1-211ENST00000531709 MED1Q15648 1581 aaPredicted RBP12.62□□□□□ -0.39
NXF1-211ENST00000531709 FCER1AP12319 257 aa12.61□□□□□ -0.39
NXF1-211ENST00000531709 RASSF7Q02833 373 aa12.61□□□□□ -0.39
NXF1-211ENST00000531709 ZSCAN29Q8IWY8 852 aaPredicted RBP12.61□□□□□ -0.39
NXF1-211ENST00000531709 FAM84BQ96KN1 310 aaPredicted RBP12.61□□□□□ -0.39
NXF1-211ENST00000531709 BRIP1Q9BX63 1249 aa12.61□□□□□ -0.39
NXF1-211ENST00000531709 TSGA10Q9BZW7 698 aa12.61□□□□□ -0.39
NXF1-211ENST00000531709 ATP8A2Q9NTI2 1148 aa12.61□□□□□ -0.39
NXF1-211ENST00000531709 DUSP10Q9Y6W6 482 aa12.61□□□□□ -0.39
NXF1-211ENST00000531709 FRMPD2Q68DX3 1309 aaPredicted RBP12.61□□□□□ -0.39
NXF1-211ENST00000531709 KDM3BQ7LBC6 1761 aa12.61□□□□□ -0.39
NXF1-211ENST00000531709 GUCY2FP51841 1108 aa12.61□□□□□ -0.39
NXF1-211ENST00000531709 PRPF4BQ13523 1007 aaKnown RBP12.61□□□□□ -0.39
NXF1-211ENST00000531709 SEC23AQ15436 765 aa12.61□□□□□ -0.39
NXF1-211ENST00000531709 CDKAL1Q5VV42 579 aa12.61□□□□□ -0.39
NXF1-211ENST00000531709 TEX11Q8IYF3 940 aa12.61□□□□□ -0.39
NXF1-211ENST00000531709 TMX4Q9H1E5 349 aaPredicted RBP12.61□□□□□ -0.39
NXF1-211ENST00000531709 OPA1O60313 960 aa12.61□□□□□ -0.39
NXF1-211ENST00000531709 CALCRLQ16602 461 aa12.61□□□□□ -0.39
NXF1-211ENST00000531709 REXO1Q8N1G1 1221 aaKnown RBP12.61□□□□□ -0.39
NXF1-211ENST00000531709 TRIM58Q8NG06 486 aa12.61□□□□□ -0.39
NXF1-211ENST00000531709 TMEM60Q9H2L4 133 aa12.61□□□□□ -0.39
NXF1-211ENST00000531709 RIC1Q4ADV7 1423 aa12.61□□□□□ -0.39
NXF1-211ENST00000531709 RNF225M0QZC1 329 aaPredicted RBP12.6□□□□□ -0.39
NXF1-211ENST00000531709 TXNRD1Q16881 649 aa12.6□□□□□ -0.39
NXF1-211ENST00000531709 CFAP58Q5T655 872 aa12.6□□□□□ -0.39
NXF1-211ENST00000531709 KLHL7Q8IXQ5 586 aa12.6□□□□□ -0.39
NXF1-211ENST00000531709 ELOA2Q8IYF1 753 aaPredicted RBP12.6□□□□□ -0.39
NXF1-211ENST00000531709 SLC4A9Q96Q91 983 aa12.6□□□□□ -0.39
NXF1-211ENST00000531709 GNPATO15228 680 aa12.6□□□□□ -0.39
NXF1-211ENST00000531709 GGCXP38435 758 aa12.6□□□□□ -0.39
NXF1-211ENST00000531709 CCT5P48643 541 aa12.6□□□□□ -0.39
NXF1-211ENST00000531709 ARL6IP4Q66PJ3 421 aaKnown RBP12.6□□□□□ -0.39
NXF1-211ENST00000531709 TRMT1LQ7Z2T5 733 aaKnown RBP12.6□□□□□ -0.39
NXF1-211ENST00000531709 GPR101Q96P66 508 aaPredicted RBP12.6□□□□□ -0.39
NXF1-211ENST00000531709 ANKRD2Q9GZV1 360 aa12.6□□□□□ -0.39
NXF1-211ENST00000531709 MLXIPQ9HAP2 919 aa12.6□□□□□ -0.39
NXF1-211ENST00000531709 L1RE1Q9UN81 338 aa12.6□□□□□ -0.39
NXF1-211ENST00000531709 HPDP32754 393 aaPredicted RBP12.6□□□□□ -0.39
NXF1-211ENST00000531709 EIF4A3P38919 411 aaKnown RBP12.6□□□□□ -0.39
NXF1-211ENST00000531709 RCAN1P53805 252 aa12.6□□□□□ -0.39
NXF1-211ENST00000531709 ZBED6P86452 979 aa12.6□□□□□ -0.39
NXF1-211ENST00000531709 KRT25Q7Z3Z0 450 aa12.6□□□□□ -0.39
NXF1-211ENST00000531709 NEK8Q86SG6 692 aa12.6□□□□□ -0.39
NXF1-211ENST00000531709 BCAS4Q8TDM0 211 aa12.6□□□□□ -0.39
NXF1-211ENST00000531709 EYA3Q99504 573 aa12.6□□□□□ -0.39
NXF1-211ENST00000531709 CCNE1P24864 410 aa12.6□□□□□ -0.39
NXF1-211ENST00000531709 TBCKQ8TEA7 893 aa12.6□□□□□ -0.39
NXF1-211ENST00000531709 POLD4Q9HCU8 107 aa12.6□□□□□ -0.39
NXF1-211ENST00000531709 NDUFAB1O14561 156 aa12.59□□□□□ -0.39
NXF1-211ENST00000531709 ATP2C2O75185 946 aa12.59□□□□□ -0.39
NXF1-211ENST00000531709 KLRK1P26718 216 aa12.59□□□□□ -0.39
NXF1-211ENST00000531709 RBM5P52756 815 aaKnown RBP eCLIP12.59□□□□□ -0.394e-6■■■■□ 21.7
NXF1-211ENST00000531709 PMS1P54277 932 aaKnown RBP12.59□□□□□ -0.39
NXF1-211ENST00000531709 RPGRQ92834 1020 aaKnown RBP12.59□□□□□ -0.39
NXF1-211ENST00000531709 DHTKD1Q96HY7 919 aaPredicted RBP12.59□□□□□ -0.39
NXF1-211ENST00000531709 RPGRIP1Q96KN7 1286 aa12.59□□□□□ -0.39
NXF1-211ENST00000531709 NOX5Q96PH1 765 aa12.59□□□□□ -0.39
NXF1-211ENST00000531709 MTA3Q9BTC8 594 aa12.59□□□□□ -0.39
NXF1-211ENST00000531709 MKRN1Q9UHC7 482 aaKnown RBP12.59□□□□□ -0.39
NXF1-211ENST00000531709 CNTNAP5Q8WYK1 1306 aa12.59□□□□□ -0.39
NXF1-211ENST00000531709 LRRIQ3A6PVS8 624 aaPredicted RBP12.59□□□□□ -0.39
NXF1-211ENST00000531709 MNAT1P51948 309 aa12.59□□□□□ -0.39
NXF1-211ENST00000531709 USP14P54578 494 aa12.59□□□□□ -0.39
NXF1-211ENST00000531709 GNGT1P63211 74 aa12.59□□□□□ -0.39
NXF1-211ENST00000531709 GSTO1P78417 241 aa12.59□□□□□ -0.39
NXF1-211ENST00000531709 CACNB1Q02641 598 aaPredicted RBP12.59□□□□□ -0.39
NXF1-211ENST00000531709 STK4Q13043 487 aa12.59□□□□□ -0.39
NXF1-211ENST00000531709 ANKRD40Q6AI12 368 aa12.59□□□□□ -0.39
NXF1-211ENST00000531709 CCDC84Q86UT8 332 aaPredicted RBP12.59□□□□□ -0.39
NXF1-211ENST00000531709 ADSSL1Q8N142 457 aa12.59□□□□□ -0.39
NXF1-211ENST00000531709 SELENOOQ9BVL4 669 aa12.59□□□□□ -0.39
NXF1-211ENST00000531709 THAP9Q9H5L6 903 aa12.59□□□□□ -0.39
NXF1-211ENST00000531709 SMARCAL1Q9NZC9 954 aa12.59□□□□□ -0.39
NXF1-211ENST00000531709 HERC4Q5GLZ8 1057 aaPredicted RBP12.59□□□□□ -0.39
NXF1-211ENST00000531709 KANSL2Q9H9L4 492 aa12.59□□□□□ -0.39
NXF1-211ENST00000531709 ZNF804BA4D1E1 1349 aa12.58□□□□□ -0.39
NXF1-211ENST00000531709 PCP11498 1178 aaKnown RBP12.58□□□□□ -0.4
NXF1-211ENST00000531709 ZNF76P36508 570 aa12.58□□□□□ -0.4
NXF1-211ENST00000531709 LIG3P49916 1009 aa12.58□□□□□ -0.4
NXF1-211ENST00000531709 GTF2A1P52655 376 aaPredicted RBP12.58□□□□□ -0.4
NXF1-211ENST00000531709 LACRTQ9GZZ8 138 aa12.58□□□□□ -0.4
NXF1-211ENST00000531709 GOPCQ9HD26 462 aa12.58□□□□□ -0.4
NXF1-211ENST00000531709 AFDNP55196 1824 aaKnown RBP12.58□□□□□ -0.4
NXF1-211ENST00000531709 NCK2O43639 380 aa12.58□□□□□ -0.4
NXF1-211ENST00000531709 SLC9C1Q4G0N8 1177 aa12.58□□□□□ -0.4
NXF1-211ENST00000531709 LRRC47Q8N1G4 583 aaKnown RBP12.58□□□□□ -0.4
NXF1-211ENST00000531709 COA7Q96BR5 231 aa12.58□□□□□ -0.4
NXF1-211ENST00000531709 NSUN4Q96CB9 384 aaKnown RBP12.58□□□□□ -0.4
NXF1-211ENST00000531709 PIGSQ96S52 555 aa12.58□□□□□ -0.4
NXF1-211ENST00000531709 BSDC1Q9NW68 430 aaPredicted RBP12.58□□□□□ -0.4
NXF1-211ENST00000531709 SAMM50Q9Y512 469 aa12.58□□□□□ -0.4
NXF1-211ENST00000531709 RFC4P35249 363 aa12.58□□□□□ -0.4
NXF1-211ENST00000531709 DCAF17Q5H9S7 520 aaPredicted RBP12.58□□□□□ -0.4
NXF1-211ENST00000531709 NFRKBQ6P4R8 1299 aa12.58□□□□□ -0.4
NXF1-211ENST00000531709 RIOK1Q9BRS2 568 aaKnown RBP12.58□□□□□ -0.4
NXF1-211ENST00000531709 LMO7Q8WWI1 1683 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms