RNA–Protein interactions for RNA: ENST00000531625.1

UBXN1-212, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 542 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-212ENST00000531625 TSHZ3Q63HK5 1081 aa22.61■■□□□ 1.21
UBXN1-212ENST00000531625 STAG1Q8WVM7 1258 aa22.61■■□□□ 1.21
UBXN1-212ENST00000531625 HERVK_113Q902F9 699 aa22.61■■□□□ 1.21
UBXN1-212ENST00000531625 GAS2L1Q99501 681 aaPredicted RBP22.61■■□□□ 1.21
UBXN1-212ENST00000531625 IL23AQ9NPF7 189 aa22.61■■□□□ 1.21
UBXN1-212ENST00000531625 RNF146Q9NTX7 359 aa22.61■■□□□ 1.21
UBXN1-212ENST00000531625 C11orf97A0A1B0GVM6 126 aaPredicted RBP22.6■■□□□ 1.21
UBXN1-212ENST00000531625 SOWAHBA6NEL2 793 aa22.6■■□□□ 1.21
UBXN1-212ENST00000531625 BEX3Q00994 111 aa22.6■■□□□ 1.21
UBXN1-212ENST00000531625 TFAP4Q01664 338 aa22.6■■□□□ 1.21
UBXN1-212ENST00000531625 HDAC1Q13547 482 aaPredicted RBP22.6■■□□□ 1.21
UBXN1-212ENST00000531625 AKNAD1Q5T1N1 836 aa22.6■■□□□ 1.21
UBXN1-212ENST00000531625 AGBL1Q96MI9 1066 aa22.6■■□□□ 1.21
UBXN1-212ENST00000531625 RWDD1Q9H446 243 aaPredicted RBP22.6■■□□□ 1.21
UBXN1-212ENST00000531625 CYP2C18P33260 490 aa22.59■■□□□ 1.21
UBXN1-212ENST00000531625 SLC1A4P43007 532 aa22.59■■□□□ 1.21
UBXN1-212ENST00000531625 RAB30Q15771 203 aa22.59■■□□□ 1.21
UBXN1-212ENST00000531625 FSCN1Q16658 493 aaKnown RBP22.59■■□□□ 1.21
UBXN1-212ENST00000531625 CXCL17Q6UXB2 119 aa22.59■■□□□ 1.21
UBXN1-212ENST00000531625 NOL8Q76FK4 1167 aaKnown RBP22.59■■□□□ 1.21
UBXN1-212ENST00000531625 TLK2Q86UE8 772 aa22.59■■□□□ 1.21
UBXN1-212ENST00000531625 TRERF1Q96PN7 1200 aa22.59■■□□□ 1.21
UBXN1-212ENST00000531625 BDP1A6H8Y1 2624 aa22.59■■□□□ 1.21
UBXN1-212ENST00000531625 PPARAQ07869 468 aa22.58■■□□□ 1.21
UBXN1-212ENST00000531625 AP5M1Q9H0R1 490 aa22.58■■□□□ 1.21
UBXN1-212ENST00000531625 NAPBQ9H115 298 aa22.58■■□□□ 1.21
UBXN1-212ENST00000531625 MTIF3Q9H2K0 278 aaKnown RBP22.58■■□□□ 1.21
UBXN1-212ENST00000531625 HIPK3Q9H422 1215 aa22.58■■□□□ 1.21
UBXN1-212ENST00000531625 PRDM12Q9H4Q4 367 aa22.58■■□□□ 1.21
UBXN1-212ENST00000531625 MSRAQ9UJ68 235 aa22.58■■□□□ 1.21
UBXN1-212ENST00000531625 ISY1Q9ULR0 285 aaKnown RBP22.58■■□□□ 1.21
UBXN1-212ENST00000531625 Q9Y3F1 56 aa22.58■■□□□ 1.21
UBXN1-212ENST00000531625 TTC41PQ6P2S7 1318 aa22.57■■□□□ 1.2
UBXN1-212ENST00000531625 ZEB2O60315 1214 aa22.57■■□□□ 1.2
UBXN1-212ENST00000531625 MCCP23508 829 aa22.57■■□□□ 1.2
UBXN1-212ENST00000531625 IKQ13123 557 aaPredicted RBP22.57■■□□□ 1.2
UBXN1-212ENST00000531625 ITGA7Q13683 1181 aa22.57■■□□□ 1.2
UBXN1-212ENST00000531625 IQSEC1Q6DN90 963 aa22.57■■□□□ 1.2
UBXN1-212ENST00000531625 ATXN2LQ8WWM7 1075 aaKnown RBP22.57■■□□□ 1.2
UBXN1-212ENST00000531625 SEC62Q99442 399 aaKnown RBP22.57■■□□□ 1.2
UBXN1-212ENST00000531625 GRIN2DO15399 1336 aa22.57■■□□□ 1.2
UBXN1-212ENST00000531625 FGBP02675 491 aa22.56■■□□□ 1.2
UBXN1-212ENST00000531625 ALAS1P13196 640 aa22.56■■□□□ 1.2
UBXN1-212ENST00000531625 SMPD1P17405 629 aa22.56■■□□□ 1.2
UBXN1-212ENST00000531625 ZMYM1Q5SVZ6 1142 aa22.56■■□□□ 1.2
UBXN1-212ENST00000531625 RCSD1Q6JBY9 416 aa22.56■■□□□ 1.2
UBXN1-212ENST00000531625 CYP39A1Q9NYL5 469 aa22.56■■□□□ 1.2
UBXN1-212ENST00000531625 CXXC1Q9P0U4 656 aaPredicted RBP22.56■■□□□ 1.2
UBXN1-212ENST00000531625 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.56■■□□□ 1.2
UBXN1-212ENST00000531625 TNFRSF10AO00220 468 aa22.55■■□□□ 1.2
UBXN1-212ENST00000531625 ERC2O15083 957 aa22.55■■□□□ 1.2
UBXN1-212ENST00000531625 DYNC1LI2O43237 492 aaPredicted RBP22.55■■□□□ 1.2
UBXN1-212ENST00000531625 TAPT1Q6NXT6 567 aa22.55■■□□□ 1.2
UBXN1-212ENST00000531625 MORC4Q8TE76 937 aa22.55■■□□□ 1.2
UBXN1-212ENST00000531625 NOC4LQ9BVI4 516 aaKnown RBP22.55■■□□□ 1.2
UBXN1-212ENST00000531625 IGHDP01880 384 aa22.54■■□□□ 1.2
UBXN1-212ENST00000531625 ADGRE1Q14246 886 aa22.54■■□□□ 1.2
UBXN1-212ENST00000531625 KCTD1Q719H9 257 aa22.54■■□□□ 1.2
UBXN1-212ENST00000531625 PI4K2BQ8TCG2 481 aa22.54■■□□□ 1.2
UBXN1-212ENST00000531625 VTA1Q9NP79 307 aa22.54■■□□□ 1.2
UBXN1-212ENST00000531625 PDGFCQ9NRA1 345 aa22.54■■□□□ 1.2
UBXN1-212ENST00000531625 PRR12Q9ULL5 1215 aa22.54■■□□□ 1.2
UBXN1-212ENST00000531625 STX8Q9UNK0 236 aa22.54■■□□□ 1.2
UBXN1-212ENST00000531625 UMODL1Q5DID0 1318 aa22.54■■□□□ 1.2
UBXN1-212ENST00000531625 LRRC37A2A6NM11 1700 aa22.54■■□□□ 1.2
UBXN1-212ENST00000531625 MUM1L1Q5H9M0 696 aa22.53■■□□□ 1.2
UBXN1-212ENST00000531625 PPM1EQ8WY54 764 aa22.53■■□□□ 1.2
UBXN1-212ENST00000531625 TRPV6Q9H1D0 765 aa22.53■■□□□ 1.2
UBXN1-212ENST00000531625 IL17RBQ9NRM6 502 aa22.53■■□□□ 1.2
UBXN1-212ENST00000531625 THEGQ9P2T0 379 aa22.53■■□□□ 1.2
UBXN1-212ENST00000531625 TRANK1O15050 2925 aa22.52■■□□□ 1.2
UBXN1-212ENST00000531625 TSPY2A6NKD2 308 aa22.52■■□□□ 1.2
UBXN1-212ENST00000531625 B4GALT4O60513 344 aa22.52■■□□□ 1.2
UBXN1-212ENST00000531625 NOVP48745 357 aa22.52■■□□□ 1.2
UBXN1-212ENST00000531625 OTOP2Q7RTS6 562 aa22.52■■□□□ 1.2
UBXN1-212ENST00000531625 FBXO16Q8IX29 292 aaPredicted RBP22.52■■□□□ 1.2
UBXN1-212ENST00000531625 RPUSD2Q8IZ73 545 aaKnown RBP22.52■■□□□ 1.2
UBXN1-212ENST00000531625 ASB2Q96Q27 587 aa22.52■■□□□ 1.2
UBXN1-212ENST00000531625 FSD1Q9BTV5 496 aa22.52■■□□□ 1.2
UBXN1-212ENST00000531625 WNT8AQ9H1J5 351 aa22.52■■□□□ 1.2
UBXN1-212ENST00000531625 NKX2-4Q9H2Z4 354 aa22.52■■□□□ 1.2
UBXN1-212ENST00000531625 SLC28A3Q9HAS3 691 aa22.52■■□□□ 1.2
UBXN1-212ENST00000531625 DDX49Q9Y6V7 483 aaKnown RBP22.52■■□□□ 1.2
UBXN1-212ENST00000531625 LOC102724159A0A0B4J2E5 919 aa22.51■■□□□ 1.19
UBXN1-212ENST00000531625 FOXP2O15409 715 aa22.51■■□□□ 1.19
UBXN1-212ENST00000531625 ICAM1P05362 532 aa22.51■■□□□ 1.19
UBXN1-212ENST00000531625 PTGS1P23219 599 aa22.51■■□□□ 1.19
UBXN1-212ENST00000531625 CCL23P55773 120 aa22.51■■□□□ 1.19
UBXN1-212ENST00000531625 SNAP25P60880 206 aa22.51■■□□□ 1.19
UBXN1-212ENST00000531625 PWP2Q15269 919 aaKnown RBP22.51■■□□□ 1.19
UBXN1-212ENST00000531625 EEPD1Q7L9B9 569 aa22.51■■□□□ 1.19
UBXN1-212ENST00000531625 CHMP4CQ96CF2 233 aa22.51■■□□□ 1.19
UBXN1-212ENST00000531625 ZBTB47Q9UFB7 747 aaPredicted RBP22.51■■□□□ 1.19
UBXN1-212ENST00000531625 CCPG1Q9ULG6 757 aa22.51■■□□□ 1.19
UBXN1-212ENST00000531625 YBX2Q9Y2T7 364 aaKnown RBP22.51■■□□□ 1.19
UBXN1-212ENST00000531625 NMT2O60551 498 aa22.5■■□□□ 1.19
UBXN1-212ENST00000531625 DUSP28Q4G0W2 176 aa22.5■■□□□ 1.19
UBXN1-212ENST00000531625 NSMFQ6X4W1 530 aa22.5■■□□□ 1.19
UBXN1-212ENST00000531625 KIAA1211Q6ZU35 1233 aa22.5■■□□□ 1.19
UBXN1-212ENST00000531625 DCAF4Q8WV16 495 aa22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms