RNA–Protein interactions for RNA: ENST00000531504.5

HIPK3-205, Transcript of homeodomain interacting protein kinase 3, humanhuman

TSL 2

Gene HIPK3, Length 591 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-205ENST00000531504 CNTN2Q02246 1040 aa23.67■■□□□ 1.38
HIPK3-205ENST00000531504 FAM133AQ8N9E0 248 aa23.67■■□□□ 1.38
HIPK3-205ENST00000531504 BCL11AQ9H165 835 aa23.67■■□□□ 1.38
HIPK3-205ENST00000531504 CLIP2Q9UDT6 1046 aa23.67■■□□□ 1.38
HIPK3-205ENST00000531504 SYNPO2Q9UMS6 1093 aa23.67■■□□□ 1.38
HIPK3-205ENST00000531504 GRIN2DO15399 1336 aa23.66■■□□□ 1.38
HIPK3-205ENST00000531504 ATP5JP18859 108 aa23.66■■□□□ 1.38
HIPK3-205ENST00000531504 SBK1Q52WX2 424 aa23.66■■□□□ 1.38
HIPK3-205ENST00000531504 EPHX3Q9H6B9 360 aa23.66■■□□□ 1.38
HIPK3-205ENST00000531504 ZNF287Q9HBT7 754 aa23.66■■□□□ 1.38
HIPK3-205ENST00000531504 COG6Q9Y2V7 657 aa23.66■■□□□ 1.38
HIPK3-205ENST00000531504 DYNC1LI2O43237 492 aaPredicted RBP23.65■■□□□ 1.38
HIPK3-205ENST00000531504 CA3P07451 260 aa23.65■■□□□ 1.38
HIPK3-205ENST00000531504 SUPT20HL2P0C7V6 817 aa23.65■■□□□ 1.38
HIPK3-205ENST00000531504 ACTN1P12814 892 aa23.65■■□□□ 1.38
HIPK3-205ENST00000531504 SCLYQ96I15 445 aa23.65■■□□□ 1.38
HIPK3-205ENST00000531504 HAUS7Q99871 368 aa23.65■■□□□ 1.38
HIPK3-205ENST00000531504 Q9Y3F1 56 aa23.65■■□□□ 1.38
HIPK3-205ENST00000531504 HMMRO75330 724 aa23.64■■□□□ 1.37
HIPK3-205ENST00000531504 RPAP2Q8IXW5 612 aaPredicted RBP23.64■■□□□ 1.37
HIPK3-205ENST00000531504 GMCL1P1Q8NEA9 526 aa23.64■■□□□ 1.37
HIPK3-205ENST00000531504 AGBL1Q96MI9 1066 aa23.64■■□□□ 1.37
HIPK3-205ENST00000531504 SLC9A7Q96T83 725 aa23.64■■□□□ 1.37
HIPK3-205ENST00000531504 ALDH8A1Q9H2A2 487 aaPredicted RBP23.64■■□□□ 1.37
HIPK3-205ENST00000531504 SMPD1P17405 629 aa23.63■■□□□ 1.37
HIPK3-205ENST00000531504 PSMC6P62333 389 aa23.63■■□□□ 1.37
HIPK3-205ENST00000531504 TTLL4Q14679 1199 aa23.63■■□□□ 1.37
HIPK3-205ENST00000531504 TKFCQ3LXA3 575 aa23.63■■□□□ 1.37
HIPK3-205ENST00000531504 IQSEC1Q6DN90 963 aa23.63■■□□□ 1.37
HIPK3-205ENST00000531504 GIMAP6Q6P9H5 292 aa23.63■■□□□ 1.37
HIPK3-205ENST00000531504 STK11IPQ8N1F8 1099 aa23.63■■□□□ 1.37
HIPK3-205ENST00000531504 HLA-CQ95604 372 aa23.63■■□□□ 1.37
HIPK3-205ENST00000531504 MKL1Q969V6 931 aa23.63■■□□□ 1.37
HIPK3-205ENST00000531504 PUS7LQ9H0K6 701 aaKnown RBP23.63■■□□□ 1.37
HIPK3-205ENST00000531504 A1CFQ9NQ94 594 aaKnown RBP23.63■■□□□ 1.37
HIPK3-205ENST00000531504 RNF146Q9NTX7 359 aa23.63■■□□□ 1.37
HIPK3-205ENST00000531504 IGKV6D-41A0A0C4DH26 115 aa23.62■■□□□ 1.37
HIPK3-205ENST00000531504 SOWAHBA6NEL2 793 aa23.62■■□□□ 1.37
HIPK3-205ENST00000531504 MINDY4BA8MYZ0 360 aa23.62■■□□□ 1.37
HIPK3-205ENST00000531504 RFXAPO00287 272 aa23.62■■□□□ 1.37
HIPK3-205ENST00000531504 RAB11FIP3O75154 756 aa23.62■■□□□ 1.37
HIPK3-205ENST00000531504 TTLL1O95922 423 aa23.62■■□□□ 1.37
HIPK3-205ENST00000531504 CHGBP05060 677 aa23.62■■□□□ 1.37
HIPK3-205ENST00000531504 BMP3P12645 472 aa23.62■■□□□ 1.37
HIPK3-205ENST00000531504 PHOSPHO2Q8TCD6 241 aa23.62■■□□□ 1.37
HIPK3-205ENST00000531504 CERS4Q9HA82 394 aa23.62■■□□□ 1.37
HIPK3-205ENST00000531504 ISY1Q9ULR0 285 aaKnown RBP23.62■■□□□ 1.37
HIPK3-205ENST00000531504 TLL1O43897 1013 aa23.61■■□□□ 1.37
HIPK3-205ENST00000531504 RFC2P35250 354 aa23.61■■□□□ 1.37
HIPK3-205ENST00000531504 STAT2P52630 851 aa23.61■■□□□ 1.37
HIPK3-205ENST00000531504 DEFB128Q7Z7B8 93 aa23.61■■□□□ 1.37
HIPK3-205ENST00000531504 ZNF444Q8N0Y2 327 aaPredicted RBP23.61■■□□□ 1.37
HIPK3-205ENST00000531504 LRRC47Q8N1G4 583 aaKnown RBP23.61■■□□□ 1.37
HIPK3-205ENST00000531504 CEP95Q96GE4 821 aa23.61■■□□□ 1.37
HIPK3-205ENST00000531504 MTMR4Q9NYA4 1195 aa23.61■■□□□ 1.37
HIPK3-205ENST00000531504 SCN5AQ14524 2016 aa23.6■■□□□ 1.37
HIPK3-205ENST00000531504 TNKSO95271 1327 aa23.6■■□□□ 1.37
HIPK3-205ENST00000531504 KIF28PB7ZC32 967 aa23.6■■□□□ 1.37
HIPK3-205ENST00000531504 GPR37L1O60883 481 aa23.6■■□□□ 1.37
HIPK3-205ENST00000531504 SLFN13Q68D06 897 aa23.6■■□□□ 1.37
HIPK3-205ENST00000531504 FAM160B2Q86V87 743 aa23.6■■□□□ 1.37
HIPK3-205ENST00000531504 CHURC1Q8WUH1 139 aa23.6■■□□□ 1.37
HIPK3-205ENST00000531504 ARNTL2Q8WYA1 636 aa23.6■■□□□ 1.37
HIPK3-205ENST00000531504 VWCEQ96DN2 955 aa23.6■■□□□ 1.37
HIPK3-205ENST00000531504 STRBPQ96SI9 672 aaKnown RBP23.6■■□□□ 1.37
HIPK3-205ENST00000531504 VTA1Q9NP79 307 aa23.6■■□□□ 1.37
HIPK3-205ENST00000531504 POLR3EQ9NVU0 708 aa23.6■■□□□ 1.37
HIPK3-205ENST00000531504 TANC1Q9C0D5 1861 aa23.6■■□□□ 1.37
HIPK3-205ENST00000531504 TMEM232C9JQI7 657 aa23.59■■□□□ 1.37
HIPK3-205ENST00000531504 IKQ13123 557 aaPredicted RBP23.59■■□□□ 1.37
HIPK3-205ENST00000531504 FBXO16Q8IX29 292 aaPredicted RBP23.59■■□□□ 1.37
HIPK3-205ENST00000531504 TRERF1Q96PN7 1200 aa23.59■■□□□ 1.37
HIPK3-205ENST00000531504 PDGFCQ9NRA1 345 aa23.59■■□□□ 1.37
HIPK3-205ENST00000531504 TRMT13Q9NUP7 481 aaKnown RBP23.59■■□□□ 1.37
HIPK3-205ENST00000531504 PIEZO1Q92508 2521 aa23.58■■□□□ 1.37
HIPK3-205ENST00000531504 GSG1L2A8MUP6 293 aa23.58■■□□□ 1.37
HIPK3-205ENST00000531504 CYP2C9P11712 490 aa23.58■■□□□ 1.37
HIPK3-205ENST00000531504 TAPT1Q6NXT6 567 aa23.58■■□□□ 1.37
HIPK3-205ENST00000531504 EEPD1Q7L9B9 569 aa23.58■■□□□ 1.37
HIPK3-205ENST00000531504 COL4A4P53420 1690 aaPredicted RBP23.57■■□□□ 1.36
HIPK3-205ENST00000531504 EPOPA6NHQ4 379 aa23.57■■□□□ 1.36
HIPK3-205ENST00000531504 ALAS1P13196 640 aa23.57■■□□□ 1.36
HIPK3-205ENST00000531504 TAP1Q03518 808 aa23.57■■□□□ 1.36
HIPK3-205ENST00000531504 KRT40Q6A162 431 aa23.57■■□□□ 1.36
HIPK3-205ENST00000531504 KIAA1211Q6ZU35 1233 aa23.57■■□□□ 1.36
HIPK3-205ENST00000531504 ZNF536O15090 1300 aa23.57■■□□□ 1.36
HIPK3-205ENST00000531504 PLIN4Q96Q06 1357 aa23.56■■□□□ 1.36
HIPK3-205ENST00000531504 CENPBP07199 599 aaPredicted RBP23.56■■□□□ 1.36
HIPK3-205ENST00000531504 PTGS1P23219 599 aa23.56■■□□□ 1.36
HIPK3-205ENST00000531504 TDO2P48775 406 aa23.56■■□□□ 1.36
HIPK3-205ENST00000531504 CPT1AP50416 773 aa23.56■■□□□ 1.36
HIPK3-205ENST00000531504 DUSP28Q4G0W2 176 aa23.56■■□□□ 1.36
HIPK3-205ENST00000531504 HERC6Q8IVU3 1022 aa23.56■■□□□ 1.36
HIPK3-205ENST00000531504 STAG1Q8WVM7 1258 aa23.56■■□□□ 1.36
HIPK3-205ENST00000531504 GPHNQ9NQX3 736 aaPredicted RBP23.56■■□□□ 1.36
HIPK3-205ENST00000531504 PITPNM1O00562 1244 aa23.55■■□□□ 1.36
HIPK3-205ENST00000531504 PRDM1O75626 825 aa23.55■■□□□ 1.36
HIPK3-205ENST00000531504 TSPY3P0CV98 308 aa23.55■■□□□ 1.36
HIPK3-205ENST00000531504 TSPY8P0CW00 308 aa23.55■■□□□ 1.36
HIPK3-205ENST00000531504 RETREG2Q8NC44 543 aa23.55■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms