RNA–Protein interactions for RNA: ENST00000531490.1

TRIM53CP-201, Transcript of tripartite motif containing 53C, pseudogene, humanhuman

BASIC

Gene TRIM53CP, Length 1,354 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM53CP-201ENST00000531490 PDE3AQ14432 1141 aa8.59□□□□□ -1.03
TRIM53CP-201ENST00000531490 LYPD4Q6UWN0 246 aa8.59□□□□□ -1.03
TRIM53CP-201ENST00000531490 CCDC84Q86UT8 332 aaPredicted RBP8.59□□□□□ -1.03
TRIM53CP-201ENST00000531490 NLRP8Q86W28 1048 aa8.59□□□□□ -1.03
TRIM53CP-201ENST00000531490 ZCCHC2Q9C0B9 1178 aaKnown RBP8.59□□□□□ -1.03
TRIM53CP-201ENST00000531490 PAK6Q9NQU5 681 aaPredicted RBP8.59□□□□□ -1.03
TRIM53CP-201ENST00000531490 ZNF112Q9UJU3 913 aa8.59□□□□□ -1.03
TRIM53CP-201ENST00000531490 PHF24Q9UPV7 400 aa8.59□□□□□ -1.03
TRIM53CP-201ENST00000531490 ZHX2Q9Y6X8 837 aa8.59□□□□□ -1.03
TRIM53CP-201ENST00000531490 MYH13Q9UKX3 1938 aa8.59□□□□□ -1.03
TRIM53CP-201ENST00000531490 LAMA2P24043 3122 aaKnown RBP8.58□□□□□ -1.04
TRIM53CP-201ENST00000531490 SERTM1A2A2V5 107 aa8.58□□□□□ -1.04
TRIM53CP-201ENST00000531490 EML1O00423 815 aa8.58□□□□□ -1.04
TRIM53CP-201ENST00000531490 RFX1P22670 979 aa8.58□□□□□ -1.04
TRIM53CP-201ENST00000531490 FKBP1CQ5VVH2 108 aa8.58□□□□□ -1.04
TRIM53CP-201ENST00000531490 CDC42EP5Q6NZY7 148 aa8.58□□□□□ -1.04
TRIM53CP-201ENST00000531490 GADL1Q6ZQY3 521 aa8.58□□□□□ -1.04
TRIM53CP-201ENST00000531490 ANKMY2Q8IV38 441 aa8.58□□□□□ -1.04
TRIM53CP-201ENST00000531490 SVOPQ8N4V2 548 aa8.58□□□□□ -1.04
TRIM53CP-201ENST00000531490 ABHD17AQ96GS6 310 aa8.58□□□□□ -1.04
TRIM53CP-201ENST00000531490 MTMR10Q9NXD2 777 aa8.58□□□□□ -1.04
TRIM53CP-201ENST00000531490 DDX19BQ9UMR2 479 aa8.58□□□□□ -1.04
TRIM53CP-201ENST00000531490 ZNF232Q9UNY5 417 aa8.58□□□□□ -1.04
TRIM53CP-201ENST00000531490 EXOC6BQ9Y2D4 811 aa8.58□□□□□ -1.04
TRIM53CP-201ENST00000531490 STXBP5LQ9Y2K9 1186 aa8.58□□□□□ -1.04
TRIM53CP-201ENST00000531490 NOP58Q9Y2X3 529 aaKnown RBP8.58□□□□□ -1.04
TRIM53CP-201ENST00000531490 DAGLAQ9Y4D2 1042 aa8.58□□□□□ -1.04
TRIM53CP-201ENST00000531490 LAMB1P07942 1786 aa8.57□□□□□ -1.04
TRIM53CP-201ENST00000531490 MYO5AQ9Y4I1 1855 aaKnown RBP8.57□□□□□ -1.04
TRIM53CP-201ENST00000531490 A0A0G2JLL6 359 aaPredicted RBP8.57□□□□□ -1.04
TRIM53CP-201ENST00000531490 TNPO2O14787 897 aaKnown RBP8.57□□□□□ -1.04
TRIM53CP-201ENST00000531490 PSMA6P60900 246 aaKnown RBP8.57□□□□□ -1.04
TRIM53CP-201ENST00000531490 NOL9Q5SY16 702 aaKnown RBP8.57□□□□□ -1.04
TRIM53CP-201ENST00000531490 FIGNL1Q6PIW4 674 aa8.57□□□□□ -1.04
TRIM53CP-201ENST00000531490 PI16Q6UXB8 463 aa8.57□□□□□ -1.04
TRIM53CP-201ENST00000531490 NECAB2Q7Z6G3 386 aa8.57□□□□□ -1.04
TRIM53CP-201ENST00000531490 PRRT2Q7Z6L0 340 aaPredicted RBP8.57□□□□□ -1.04
TRIM53CP-201ENST00000531490 TBC1D22AQ8WUA7 517 aa8.57□□□□□ -1.04
TRIM53CP-201ENST00000531490 FAM151AQ8WW52 585 aa8.57□□□□□ -1.04
TRIM53CP-201ENST00000531490 EAF2Q96CJ1 260 aaPredicted RBP8.57□□□□□ -1.04
TRIM53CP-201ENST00000531490 HOOK2Q96ED9 719 aa8.57□□□□□ -1.04
TRIM53CP-201ENST00000531490 MRIQ9BWK5 157 aa8.57□□□□□ -1.04
TRIM53CP-201ENST00000531490 CCDC8Q9H0W5 538 aaPredicted RBP8.57□□□□□ -1.04
TRIM53CP-201ENST00000531490 ATXN7L1Q9ULK2 861 aaPredicted RBP8.57□□□□□ -1.04
TRIM53CP-201ENST00000531490 AKAP2Q9Y2D5 859 aa8.57□□□□□ -1.04
TRIM53CP-201ENST00000531490 PCDHGC4Q9Y5F7 938 aa8.57□□□□□ -1.04
TRIM53CP-201ENST00000531490 TRIM75PA6NK02 468 aa8.56□□□□□ -1.04
TRIM53CP-201ENST00000531490 PHF20L1A8MW92 1017 aa8.56□□□□□ -1.04
TRIM53CP-201ENST00000531490 CXCL11O14625 94 aa8.56□□□□□ -1.04
TRIM53CP-201ENST00000531490 ARHGEF15O94989 841 aa8.56□□□□□ -1.04
TRIM53CP-201ENST00000531490 CELA2BP08218 269 aaPredicted RBP8.56□□□□□ -1.04
TRIM53CP-201ENST00000531490 PTPRAP18433 802 aa8.56□□□□□ -1.04
TRIM53CP-201ENST00000531490 PRDX5P30044 214 aa8.56□□□□□ -1.04
TRIM53CP-201ENST00000531490 BMP8BP34820 402 aa8.56□□□□□ -1.04
TRIM53CP-201ENST00000531490 OS9Q13438 667 aaPredicted RBP8.56□□□□□ -1.04
TRIM53CP-201ENST00000531490 RASGRF1Q13972 1273 aa8.56□□□□□ -1.04
TRIM53CP-201ENST00000531490 TNNI3KQ59H18 835 aa8.56□□□□□ -1.04
TRIM53CP-201ENST00000531490 TREML2Q5T2D2 321 aa8.56□□□□□ -1.04
TRIM53CP-201ENST00000531490 HHIPL2Q6UWX4 724 aa8.56□□□□□ -1.04
TRIM53CP-201ENST00000531490 RPAP2Q8IXW5 612 aaPredicted RBP8.56□□□□□ -1.04
TRIM53CP-201ENST00000531490 ANKRD13CQ8N6S4 541 aa8.56□□□□□ -1.04
TRIM53CP-201ENST00000531490 FAM161BQ96MY7 647 aa8.56□□□□□ -1.04
TRIM53CP-201ENST00000531490 DBNDD2Q9BQY9 259 aa8.56□□□□□ -1.04
TRIM53CP-201ENST00000531490 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.56□□□□□ -1.04
TRIM53CP-201ENST00000531490 BCL11AQ9H165 835 aa8.56□□□□□ -1.04
TRIM53CP-201ENST00000531490 USP40Q9NVE5 1235 aa8.56□□□□□ -1.04
TRIM53CP-201ENST00000531490 FPGT-TNNI3KV9GXZ4 949 aa8.56□□□□□ -1.04
TRIM53CP-201ENST00000531490 ECM29Q5VYK3 1845 aa8.56□□□□□ -1.04
TRIM53CP-201ENST00000531490 EYSQ5T1H1 3165 aa8.56□□□□□ -1.04
TRIM53CP-201ENST00000531490 RPAP1Q9BWH6 1393 aaPredicted RBP8.56□□□□□ -1.04
TRIM53CP-201ENST00000531490 MYH2Q9UKX2 1941 aa8.56□□□□□ -1.04
TRIM53CP-201ENST00000531490 PEX10O60683 326 aa8.55□□□□□ -1.04
TRIM53CP-201ENST00000531490 LGR5O75473 907 aa8.55□□□□□ -1.04
TRIM53CP-201ENST00000531490 LRIT3Q3SXY7 679 aa8.55□□□□□ -1.04
TRIM53CP-201ENST00000531490 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.55□□□□□ -1.04
TRIM53CP-201ENST00000531490 TDHQ8IZJ6 230 aa8.55□□□□□ -1.04
TRIM53CP-201ENST00000531490 WDR66Q8TBY9 1149 aa8.55□□□□□ -1.04
TRIM53CP-201ENST00000531490 SMCR8Q8TEV9 937 aaPredicted RBP8.55□□□□□ -1.04
TRIM53CP-201ENST00000531490 ACDQ96AP0 544 aa8.55□□□□□ -1.04
TRIM53CP-201ENST00000531490 HINFPQ9BQA5 517 aa8.55□□□□□ -1.04
TRIM53CP-201ENST00000531490 UBE2OQ9C0C9 1292 aaKnown RBP8.55□□□□□ -1.04
TRIM53CP-201ENST00000531490 IL1RAPL2Q9NP60 686 aa8.55□□□□□ -1.04
TRIM53CP-201ENST00000531490 PICK1Q9NRD5 415 aa8.55□□□□□ -1.04
TRIM53CP-201ENST00000531490 GNL3LQ9NVN8 582 aaKnown RBP8.55□□□□□ -1.04
TRIM53CP-201ENST00000531490 TLR7Q9NYK1 1049 aaKnown RBP8.55□□□□□ -1.04
TRIM53CP-201ENST00000531490 HMG20BQ9P0W2 317 aa8.55□□□□□ -1.04
TRIM53CP-201ENST00000531490 HCN2Q9UL51 889 aa8.55□□□□□ -1.04
TRIM53CP-201ENST00000531490 DENND2AQ9ULE3 1009 aa8.55□□□□□ -1.04
TRIM53CP-201ENST00000531490 AFG3L2Q9Y4W6 797 aa8.55□□□□□ -1.04
TRIM53CP-201ENST00000531490 ATRNL1Q5VV63 1379 aa8.55□□□□□ -1.04
TRIM53CP-201ENST00000531490 AK9Q5TCS8 1911 aa8.54□□□□□ -1.04
TRIM53CP-201ENST00000531490 ATXN7O15265 892 aaPredicted RBP8.54□□□□□ -1.04
TRIM53CP-201ENST00000531490 FGFR3P22607 806 aa8.54□□□□□ -1.04
TRIM53CP-201ENST00000531490 MCAMP43121 646 aa8.54□□□□□ -1.04
TRIM53CP-201ENST00000531490 RGS3P49796 1198 aa8.54□□□□□ -1.04
TRIM53CP-201ENST00000531490 RRP1P56182 461 aaKnown RBP8.54□□□□□ -1.04
TRIM53CP-201ENST00000531490 CTBSQ01459 385 aa8.54□□□□□ -1.04
TRIM53CP-201ENST00000531490 GORABQ5T7V8 394 aa8.54□□□□□ -1.04
TRIM53CP-201ENST00000531490 FASTKD5Q7L8L6 764 aaKnown RBP8.54□□□□□ -1.04
TRIM53CP-201ENST00000531490 SCYL3Q8IZE3 742 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms