RNA–Protein interactions for RNA: ENST00000531290.5

TRAPPC4-210, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,135 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-210ENST00000531290 MYADML2A6NDP7 307 aa26.21■■□□□ 1.79
TRAPPC4-210ENST00000531290 CST5P28325 142 aaPredicted RBP26.21■■□□□ 1.79
TRAPPC4-210ENST00000531290 TNFAIP2Q03169 654 aa26.21■■□□□ 1.79
TRAPPC4-210ENST00000531290 TBC1D10CQ8IV04 446 aa26.21■■□□□ 1.79
TRAPPC4-210ENST00000531290 TOX2Q96NM4 488 aa26.21■■□□□ 1.79
TRAPPC4-210ENST00000531290 KATNBL1Q9H079 304 aa26.21■■□□□ 1.79
TRAPPC4-210ENST00000531290 ELP1O95163 1332 aa26.2■■□□□ 1.79
TRAPPC4-210ENST00000531290 RAG1P15918 1043 aa26.2■■□□□ 1.78
TRAPPC4-210ENST00000531290 SHHQ15465 462 aa26.2■■□□□ 1.78
TRAPPC4-210ENST00000531290 ANKRD33Q7Z3H0 272 aa26.2■■□□□ 1.78
TRAPPC4-210ENST00000531290 UPF3AQ9H1J1 476 aaKnown RBP26.2■■□□□ 1.78
TRAPPC4-210ENST00000531290 MYH4Q9Y623 1939 aa26.2■■□□□ 1.78
TRAPPC4-210ENST00000531290 KIAA0355O15063 1070 aa26.19■■□□□ 1.78
TRAPPC4-210ENST00000531290 ADCY6O43306 1168 aa26.19■■□□□ 1.78
TRAPPC4-210ENST00000531290 ASGR1P07306 291 aa26.19■■□□□ 1.78
TRAPPC4-210ENST00000531290 PDHBP11177 359 aa26.19■■□□□ 1.78
TRAPPC4-210ENST00000531290 IRX5P78411 483 aaPredicted RBP26.19■■□□□ 1.78
TRAPPC4-210ENST00000531290 PNMA2Q9UL42 364 aa26.19■■□□□ 1.78
TRAPPC4-210ENST00000531290 ZNFX1Q9P2E3 1918 aaKnown RBP26.19■■□□□ 1.78
TRAPPC4-210ENST00000531290 NT5C2P49902 561 aa26.18■■□□□ 1.78
TRAPPC4-210ENST00000531290 MTMR10Q9NXD2 777 aa26.18■■□□□ 1.78
TRAPPC4-210ENST00000531290 SUPT16HQ9Y5B9 1047 aaKnown RBP26.18■■□□□ 1.78
TRAPPC4-210ENST00000531290 ZNF543Q08ER8 600 aa26.17■■□□□ 1.78
TRAPPC4-210ENST00000531290 FAAP100Q0VG06 881 aa26.17■■□□□ 1.78
TRAPPC4-210ENST00000531290 BAATQ14032 418 aaPredicted RBP26.17■■□□□ 1.78
TRAPPC4-210ENST00000531290 CCDC178Q5BJE1 867 aa26.17■■□□□ 1.78
TRAPPC4-210ENST00000531290 C9orf50Q5SZB4 431 aa26.17■■□□□ 1.78
TRAPPC4-210ENST00000531290 IQCA1Q86XH1 822 aa26.17■■□□□ 1.78
TRAPPC4-210ENST00000531290 ZKSCAN3Q9BRR0 538 aa26.17■■□□□ 1.78
TRAPPC4-210ENST00000531290 AP5M1Q9H0R1 490 aa26.17■■□□□ 1.78
TRAPPC4-210ENST00000531290 ADD3Q9UEY8 706 aaKnown RBP26.17■■□□□ 1.78
TRAPPC4-210ENST00000531290 MROH7Q68CQ1 1323 aa26.16■■□□□ 1.78
TRAPPC4-210ENST00000531290 C11orf97A0A1B0GVM6 126 aaPredicted RBP26.16■■□□□ 1.78
TRAPPC4-210ENST00000531290 ITGB8P26012 769 aa26.16■■□□□ 1.78
TRAPPC4-210ENST00000531290 IQSEC1Q6DN90 963 aa26.16■■□□□ 1.78
TRAPPC4-210ENST00000531290 EEPD1Q7L9B9 569 aa26.16■■□□□ 1.78
TRAPPC4-210ENST00000531290 DGKHQ86XP1 1220 aa26.16■■□□□ 1.78
TRAPPC4-210ENST00000531290 CTNNA3Q9UI47 895 aa26.16■■□□□ 1.78
TRAPPC4-210ENST00000531290 NEDD4P46934 1319 aa26.15■■□□□ 1.78
TRAPPC4-210ENST00000531290 IMMTQ16891 758 aaKnown RBP26.15■■□□□ 1.78
TRAPPC4-210ENST00000531290 FAM109BQ6ICB4 259 aaPredicted RBP26.15■■□□□ 1.78
TRAPPC4-210ENST00000531290 SLC17A8Q8NDX2 589 aa26.15■■□□□ 1.78
TRAPPC4-210ENST00000531290 PURBQ96QR8 312 aaKnown RBP26.15■■□□□ 1.78
TRAPPC4-210ENST00000531290 DSCC1Q9BVC3 393 aa26.15■■□□□ 1.78
TRAPPC4-210ENST00000531290 ASTN1O14525 1302 aa26.14■■□□□ 1.78
TRAPPC4-210ENST00000531290 A0A0U1RQG5 324 aaPredicted RBP26.14■■□□□ 1.78
TRAPPC4-210ENST00000531290 PTPDC1A2A3K4 754 aa26.14■■□□□ 1.78
TRAPPC4-210ENST00000531290 ARVCFO00192 962 aa26.14■■□□□ 1.78
TRAPPC4-210ENST00000531290 NFIBO00712 420 aa26.14■■□□□ 1.78
TRAPPC4-210ENST00000531290 DYNC1LI2O43237 492 aaPredicted RBP26.14■■□□□ 1.78
TRAPPC4-210ENST00000531290 KDM4AO75164 1064 aa26.14■■□□□ 1.78
TRAPPC4-210ENST00000531290 SNHG28P0DPA3 235 aa26.14■■□□□ 1.78
TRAPPC4-210ENST00000531290 CDK7P50613 346 aa26.14■■□□□ 1.78
TRAPPC4-210ENST00000531290 NKX3-2P78367 333 aa26.14■■□□□ 1.78
TRAPPC4-210ENST00000531290 BEX3Q00994 111 aa26.14■■□□□ 1.78
TRAPPC4-210ENST00000531290 GPATCH4Q5T3I0 446 aaKnown RBP26.14■■□□□ 1.78
TRAPPC4-210ENST00000531290 VTA1Q9NP79 307 aa26.14■■□□□ 1.78
TRAPPC4-210ENST00000531290 GNEQ9Y223 722 aaKnown RBP26.14■■□□□ 1.78
TRAPPC4-210ENST00000531290 STXBP5LQ9Y2K9 1186 aa26.14■■□□□ 1.78
TRAPPC4-210ENST00000531290 DDX49Q9Y6V7 483 aaKnown RBP26.14■■□□□ 1.78
TRAPPC4-210ENST00000531290 PLXNA1Q9UIW2 1896 aa26.14■■□□□ 1.78
TRAPPC4-210ENST00000531290 SMCHD1A6NHR9 2005 aa26.14■■□□□ 1.77
TRAPPC4-210ENST00000531290 CTAGE5O15320 804 aa26.13■■□□□ 1.77
TRAPPC4-210ENST00000531290 ZEB2O60315 1214 aa26.13■■□□□ 1.77
TRAPPC4-210ENST00000531290 SMPD1P17405 629 aa26.13■■□□□ 1.77
TRAPPC4-210ENST00000531290 FPGSQ05932 587 aa26.13■■□□□ 1.77
TRAPPC4-210ENST00000531290 KIAA1211Q6ZU35 1233 aa26.13■■□□□ 1.77
TRAPPC4-210ENST00000531290 TLK2Q86UE8 772 aa26.13■■□□□ 1.77
TRAPPC4-210ENST00000531290 FBXO16Q8IX29 292 aaPredicted RBP26.13■■□□□ 1.77
TRAPPC4-210ENST00000531290 PDGFCQ9NRA1 345 aa26.13■■□□□ 1.77
TRAPPC4-210ENST00000531290 FSCN1Q16658 493 aaKnown RBP26.12■■□□□ 1.77
TRAPPC4-210ENST00000531290 TAPT1Q6NXT6 567 aa26.12■■□□□ 1.77
TRAPPC4-210ENST00000531290 MORC4Q8TE76 937 aa26.12■■□□□ 1.77
TRAPPC4-210ENST00000531290 KAT14Q9H8E8 782 aa26.12■■□□□ 1.77
TRAPPC4-210ENST00000531290 Q9Y3F1 56 aa26.12■■□□□ 1.77
TRAPPC4-210ENST00000531290 LOC102724159A0A0B4J2E5 919 aa26.11■■□□□ 1.77
TRAPPC4-210ENST00000531290 B4E1Z4 1266 aa26.11■■□□□ 1.77
TRAPPC4-210ENST00000531290 TLR3O15455 904 aaKnown RBP26.11■■□□□ 1.77
TRAPPC4-210ENST00000531290 CABYRO75952 493 aa26.11■■□□□ 1.77
TRAPPC4-210ENST00000531290 TIMP1P01033 207 aa26.11■■□□□ 1.77
TRAPPC4-210ENST00000531290 GOLGA8HP0CJ92 632 aa26.11■■□□□ 1.77
TRAPPC4-210ENST00000531290 CALML3P27482 149 aa26.11■■□□□ 1.77
TRAPPC4-210ENST00000531290 PWP2Q15269 919 aaKnown RBP26.11■■□□□ 1.77
TRAPPC4-210ENST00000531290 RNF207Q6ZRF8 634 aa26.11■■□□□ 1.77
TRAPPC4-210ENST00000531290 PNMA1Q8ND90 353 aa26.11■■□□□ 1.77
TRAPPC4-210ENST00000531290 CLEC4DQ8WXI8 215 aa26.11■■□□□ 1.77
TRAPPC4-210ENST00000531290 ZSCAN10Q96SZ4 725 aaPredicted RBP26.11■■□□□ 1.77
TRAPPC4-210ENST00000531290 WDR19Q8NEZ3 1342 aa26.11■■□□□ 1.77
TRAPPC4-210ENST00000531290 ALDH5A1P51649 535 aaPredicted RBP26.1■■□□□ 1.77
TRAPPC4-210ENST00000531290 ZNF697Q5TEC3 545 aa26.1■■□□□ 1.77
TRAPPC4-210ENST00000531290 CXCL17Q6UXB2 119 aa26.1■■□□□ 1.77
TRAPPC4-210ENST00000531290 ANKS1AQ92625 1134 aa26.1■■□□□ 1.77
TRAPPC4-210ENST00000531290 RNPC3Q96LT9 517 aaKnown RBP26.1■■□□□ 1.77
TRAPPC4-210ENST00000531290 MPHOSPH6Q99547 160 aaKnown RBP26.1■■□□□ 1.77
TRAPPC4-210ENST00000531290 KRT23Q9C075 422 aa26.1■■□□□ 1.77
TRAPPC4-210ENST00000531290 UBA5Q9GZZ9 404 aa26.1■■□□□ 1.77
TRAPPC4-210ENST00000531290 ZSWIM5Q9P217 1185 aa26.1■■□□□ 1.77
TRAPPC4-210ENST00000531290 TBX21Q9UL17 535 aa26.1■■□□□ 1.77
TRAPPC4-210ENST00000531290 EPHB4P54760 987 aa26.09■■□□□ 1.77
TRAPPC4-210ENST00000531290 FAM161BQ96MY7 647 aa26.09■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms