RNA–Protein interactions for RNA: ENST00000531041.1

SF3B2-211, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 1 (best)

Gene SF3B2, Length 1,440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-211ENST00000531041 FKTNO75072 461 aa19.55■□□□□ 0.72
SF3B2-211ENST00000531041 PPFIA3O75145 1194 aa19.55■□□□□ 0.72
SF3B2-211ENST00000531041 SLC4A3P48751 1232 aa19.55■□□□□ 0.72
SF3B2-211ENST00000531041 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.55■□□□□ 0.72
SF3B2-211ENST00000531041 CCAR1Q8IX12 1150 aaKnown RBP19.55■□□□□ 0.72
SF3B2-211ENST00000531041 ZNF713Q8N859 430 aaPredicted RBP19.55■□□□□ 0.72
SF3B2-211ENST00000531041 SMARCC2Q8TAQ2 1214 aa19.55■□□□□ 0.72
SF3B2-211ENST00000531041 ZNF296Q8WUU4 475 aaPredicted RBP19.55■□□□□ 0.72
SF3B2-211ENST00000531041 TRERF1Q96PN7 1200 aa19.55■□□□□ 0.72
SF3B2-211ENST00000531041 RNF146Q9NTX7 359 aa19.55■□□□□ 0.72
SF3B2-211ENST00000531041 FBXO40Q9UH90 709 aa19.55■□□□□ 0.72
SF3B2-211ENST00000531041 PTPDC1A2A3K4 754 aa19.54■□□□□ 0.72
SF3B2-211ENST00000531041 FOXN1O15353 648 aa19.54■□□□□ 0.72
SF3B2-211ENST00000531041 FDPSP14324 419 aaKnown RBP19.54■□□□□ 0.72
SF3B2-211ENST00000531041 KIF22Q14807 665 aa19.54■□□□□ 0.72
SF3B2-211ENST00000531041 COA7Q96BR5 231 aa19.54■□□□□ 0.72
SF3B2-211ENST00000531041 ORC3Q9UBD5 711 aaPredicted RBP19.54■□□□□ 0.72
SF3B2-211ENST00000531041 MRPL11Q9Y3B7 192 aaKnown RBP19.54■□□□□ 0.72
SF3B2-211ENST00000531041 STRNO43815 780 aa19.53■□□□□ 0.72
SF3B2-211ENST00000531041 JAK2O60674 1132 aa19.53■□□□□ 0.72
SF3B2-211ENST00000531041 TAL1P17542 331 aaPredicted RBP19.53■□□□□ 0.72
SF3B2-211ENST00000531041 HMGN5P82970 282 aaKnown RBP19.53■□□□□ 0.72
SF3B2-211ENST00000531041 MUM1L1Q5H9M0 696 aa19.53■□□□□ 0.72
SF3B2-211ENST00000531041 WWC2Q6AWC2 1192 aa19.53■□□□□ 0.72
SF3B2-211ENST00000531041 HEATR3Q7Z4Q2 680 aa19.53■□□□□ 0.72
SF3B2-211ENST00000531041 CLEC4DQ8WXI8 215 aa19.53■□□□□ 0.72
SF3B2-211ENST00000531041 GPKOWQ92917 476 aaPredicted RBP eCLIP19.53■□□□□ 0.72
SF3B2-211ENST00000531041 ERO1AQ96HE7 468 aa19.53■□□□□ 0.72
SF3B2-211ENST00000531041 MAF1Q9H063 256 aa19.53■□□□□ 0.72
SF3B2-211ENST00000531041 ACAD9Q9H845 621 aa19.53■□□□□ 0.72
SF3B2-211ENST00000531041 HOMER2Q9NSB8 354 aa19.53■□□□□ 0.72
SF3B2-211ENST00000531041 BARHL2Q9NY43 387 aa19.53■□□□□ 0.72
SF3B2-211ENST00000531041 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.53■□□□□ 0.72
SF3B2-211ENST00000531041 DTNBO60941 627 aa19.52■□□□□ 0.72
SF3B2-211ENST00000531041 HSPA8P11142 646 aaKnown RBP19.52■□□□□ 0.72
SF3B2-211ENST00000531041 CTGFP29279 349 aa19.52■□□□□ 0.72
SF3B2-211ENST00000531041 PSMC4P43686 418 aa19.52■□□□□ 0.72
SF3B2-211ENST00000531041 CTCFP49711 727 aaPredicted RBP19.52■□□□□ 0.72
SF3B2-211ENST00000531041 FCGRTP55899 365 aa19.52■□□□□ 0.72
SF3B2-211ENST00000531041 GPR142Q7Z601 462 aa19.52■□□□□ 0.72
SF3B2-211ENST00000531041 PLEKHH3Q7Z736 793 aa19.52■□□□□ 0.72
SF3B2-211ENST00000531041 STXBP3O00186 592 aa19.51■□□□□ 0.71
SF3B2-211ENST00000531041 NFIBO00712 420 aa19.51■□□□□ 0.71
SF3B2-211ENST00000531041 FCER1AP12319 257 aa19.51■□□□□ 0.71
SF3B2-211ENST00000531041 WDR78Q5VTH9 848 aa19.51■□□□□ 0.71
SF3B2-211ENST00000531041 PPP1R18Q6NYC8 613 aa19.51■□□□□ 0.71
SF3B2-211ENST00000531041 ABRAQ8N0Z2 381 aa19.51■□□□□ 0.71
SF3B2-211ENST00000531041 FAM177A1Q8N128 213 aaPredicted RBP19.51■□□□□ 0.71
SF3B2-211ENST00000531041 RGS22Q8NE09 1264 aa19.51■□□□□ 0.71
SF3B2-211ENST00000531041 CD99L2Q8TCZ2 262 aa19.51■□□□□ 0.71
SF3B2-211ENST00000531041 WASF1Q92558 559 aa19.51■□□□□ 0.71
SF3B2-211ENST00000531041 DDX11Q96FC9 970 aa19.51■□□□□ 0.71
SF3B2-211ENST00000531041 INTS4Q96HW7 963 aaKnown RBP19.51■□□□□ 0.71
SF3B2-211ENST00000531041 TRIM47Q96LD4 638 aa19.51■□□□□ 0.71
SF3B2-211ENST00000531041 CWC22Q9HCG8 908 aaKnown RBP19.51■□□□□ 0.71
SF3B2-211ENST00000531041 SH3GLB2Q9NR46 395 aa19.51■□□□□ 0.71
SF3B2-211ENST00000531041 IVNS1ABPQ9Y6Y0 642 aa19.51■□□□□ 0.71
SF3B2-211ENST00000531041 TNPO2O14787 897 aaKnown RBP19.51■□□□□ 0.71
SF3B2-211ENST00000531041 OPLAHO14841 1288 aa19.51■□□□□ 0.71
SF3B2-211ENST00000531041 PTPREP23469 700 aa19.51■□□□□ 0.71
SF3B2-211ENST00000531041 CAP1Q01518 475 aa19.51■□□□□ 0.71
SF3B2-211ENST00000531041 ARHGEF6Q15052 776 aa19.51■□□□□ 0.71
SF3B2-211ENST00000531041 TYW1BQ6NUM6 668 aa19.51■□□□□ 0.71
SF3B2-211ENST00000531041 MCF2L2Q86YR7 1114 aa19.51■□□□□ 0.71
SF3B2-211ENST00000531041 SAMD3Q8N6K7 520 aa19.51■□□□□ 0.71
SF3B2-211ENST00000531041 ARHGAP39Q9C0H5 1083 aa19.51■□□□□ 0.71
SF3B2-211ENST00000531041 GNRH1P01148 92 aa19.5■□□□□ 0.71
SF3B2-211ENST00000531041 NAPAP54920 295 aa19.5■□□□□ 0.71
SF3B2-211ENST00000531041 GHRHRQ02643 423 aa19.5■□□□□ 0.71
SF3B2-211ENST00000531041 GRB14Q14449 540 aa19.5■□□□□ 0.71
SF3B2-211ENST00000531041 BECN1Q14457 450 aa19.5■□□□□ 0.71
SF3B2-211ENST00000531041 CCDC12Q8WUD4 166 aaPredicted RBP19.5■□□□□ 0.71
SF3B2-211ENST00000531041 AIFM3Q96NN9 605 aa19.5■□□□□ 0.71
SF3B2-211ENST00000531041 MMP19Q99542 508 aa19.5■□□□□ 0.71
SF3B2-211ENST00000531041 A1CFQ9NQ94 594 aaKnown RBP19.5■□□□□ 0.71
SF3B2-211ENST00000531041 MAP3K20Q9NYL2 800 aaKnown RBP19.5■□□□□ 0.71
SF3B2-211ENST00000531041 PFASO15067 1338 aa19.49■□□□□ 0.71
SF3B2-211ENST00000531041 MCM3APO60318 1980 aa19.49■□□□□ 0.71
SF3B2-211ENST00000531041 ESYT2A0FGR8 921 aa19.49■□□□□ 0.71
SF3B2-211ENST00000531041 SLC15A5A6NIM6 579 aa19.49■□□□□ 0.71
SF3B2-211ENST00000531041 ECM2O94769 699 aaPredicted RBP19.49■□□□□ 0.71
SF3B2-211ENST00000531041 KCTD2Q14681 263 aa19.49■□□□□ 0.71
SF3B2-211ENST00000531041 MORN1Q5T089 497 aa19.49■□□□□ 0.71
SF3B2-211ENST00000531041 TEX2Q8IWB9 1127 aa19.49■□□□□ 0.71
SF3B2-211ENST00000531041 ANKRD35Q8N283 1001 aa19.49■□□□□ 0.71
SF3B2-211ENST00000531041 CCDC148Q8NFR7 591 aa19.49■□□□□ 0.71
SF3B2-211ENST00000531041 ALG1Q9BT22 464 aa19.49■□□□□ 0.71
SF3B2-211ENST00000531041 TSHZ2Q9NRE2 1034 aa19.49■□□□□ 0.71
SF3B2-211ENST00000531041 SMC3Q9UQE7 1217 aa19.49■□□□□ 0.71
SF3B2-211ENST00000531041 DNAJC25-GNG10A0A024R161 153 aa19.48■□□□□ 0.71
SF3B2-211ENST00000531041 XBP1P17861 261 aa19.48■□□□□ 0.71
SF3B2-211ENST00000531041 LBX1P52954 281 aa19.48■□□□□ 0.71
SF3B2-211ENST00000531041 NSMFQ6X4W1 530 aa19.48■□□□□ 0.71
SF3B2-211ENST00000531041 FAM184AQ8NB25 1140 aa19.48■□□□□ 0.71
SF3B2-211ENST00000531041 SOCS4Q8WXH5 440 aa19.48■□□□□ 0.71
SF3B2-211ENST00000531041 SHISA4Q96DD7 197 aa19.48■□□□□ 0.71
SF3B2-211ENST00000531041 ZMYND12Q9H0C1 365 aa19.48■□□□□ 0.71
SF3B2-211ENST00000531041 CYP39A1Q9NYL5 469 aa19.48■□□□□ 0.71
SF3B2-211ENST00000531041 VPS54Q9P1Q0 977 aa19.48■□□□□ 0.71
SF3B2-211ENST00000531041 GJD2Q9UKL4 321 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms