RNA–Protein interactions for RNA: ENST00000529928.1

COL16A1-216, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 3

Gene COL16A1, Length 581 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-216ENST00000529928 SMARCA5O60264 1052 aaPredicted RBP19.12■□□□□ 0.65
COL16A1-216ENST00000529928 ZEB2O60315 1214 aa19.12■□□□□ 0.65
COL16A1-216ENST00000529928 TSPY3P0CV98 308 aa19.12■□□□□ 0.65
COL16A1-216ENST00000529928 TSPY8P0CW00 308 aa19.12■□□□□ 0.65
COL16A1-216ENST00000529928 PDE4BQ07343 736 aa19.12■□□□□ 0.65
COL16A1-216ENST00000529928 CCDC85BQ15834 202 aaPredicted RBP19.12■□□□□ 0.65
COL16A1-216ENST00000529928 TKFCQ3LXA3 575 aa19.12■□□□□ 0.65
COL16A1-216ENST00000529928 OTOP2Q7RTS6 562 aa19.12■□□□□ 0.65
COL16A1-216ENST00000529928 IL27Q8NEV9 243 aa19.12■□□□□ 0.65
COL16A1-216ENST00000529928 NEDD1Q8NHV4 660 aa19.12■□□□□ 0.65
COL16A1-216ENST00000529928 GPATCH3Q96I76 525 aa19.12■□□□□ 0.65
COL16A1-216ENST00000529928 ZNF536O15090 1300 aa19.11■□□□□ 0.65
COL16A1-216ENST00000529928 UMODL1Q5DID0 1318 aa19.11■□□□□ 0.65
COL16A1-216ENST00000529928 SOWAHBA6NEL2 793 aa19.11■□□□□ 0.65
COL16A1-216ENST00000529928 IKQ13123 557 aaPredicted RBP19.11■□□□□ 0.65
COL16A1-216ENST00000529928 GMCL1Q96IK5 515 aa19.11■□□□□ 0.65
COL16A1-216ENST00000529928 YBX2Q9Y2T7 364 aaKnown RBP19.11■□□□□ 0.65
COL16A1-216ENST00000529928 Q9Y3F1 56 aa19.11■□□□□ 0.65
COL16A1-216ENST00000529928 PATL2C9JE40 543 aaKnown RBP19.1■□□□□ 0.65
COL16A1-216ENST00000529928 CCL23P55773 120 aa19.1■□□□□ 0.65
COL16A1-216ENST00000529928 LRRFIP1Q32MZ4 808 aaKnown RBP19.1■□□□□ 0.65
COL16A1-216ENST00000529928 IQSEC1Q6DN90 963 aa19.1■□□□□ 0.65
COL16A1-216ENST00000529928 RPUSD2Q8IZ73 545 aaKnown RBP19.1■□□□□ 0.65
COL16A1-216ENST00000529928 IFNL3Q8IZI9 196 aa19.1■□□□□ 0.65
COL16A1-216ENST00000529928 STAG1Q8WVM7 1258 aa19.1■□□□□ 0.65
COL16A1-216ENST00000529928 AGBL1Q96MI9 1066 aa19.1■□□□□ 0.65
COL16A1-216ENST00000529928 TRERF1Q96PN7 1200 aa19.1■□□□□ 0.65
COL16A1-216ENST00000529928 UHRF1Q96T88 793 aaPredicted RBP19.1■□□□□ 0.65
COL16A1-216ENST00000529928 NOC4LQ9BVI4 516 aaKnown RBP19.1■□□□□ 0.65
COL16A1-216ENST00000529928 NACAP1Q9BZK3 213 aa19.1■□□□□ 0.65
COL16A1-216ENST00000529928 TSPYL2Q9H2G4 693 aaPredicted RBP19.1■□□□□ 0.65
COL16A1-216ENST00000529928 GRIN2DO15399 1336 aa19.09■□□□□ 0.65
COL16A1-216ENST00000529928 M0R2C6 588 aa19.09■□□□□ 0.65
COL16A1-216ENST00000529928 DYNC1LI2O43237 492 aaPredicted RBP19.09■□□□□ 0.65
COL16A1-216ENST00000529928 B4GALT4O60513 344 aa19.09■□□□□ 0.65
COL16A1-216ENST00000529928 PLA2G6O60733 806 aa19.09■□□□□ 0.65
COL16A1-216ENST00000529928 SLC3A2P08195 630 aaKnown RBP19.09■□□□□ 0.65
COL16A1-216ENST00000529928 ALAS1P13196 640 aa19.09■□□□□ 0.65
COL16A1-216ENST00000529928 SMPD1P17405 629 aa19.09■□□□□ 0.65
COL16A1-216ENST00000529928 SLC1A4P43007 532 aa19.09■□□□□ 0.65
COL16A1-216ENST00000529928 PPP4R3BQ5MIZ7 849 aa19.09■□□□□ 0.65
COL16A1-216ENST00000529928 TRPV6Q9H1D0 765 aa19.09■□□□□ 0.65
COL16A1-216ENST00000529928 WNT8AQ9H1J5 351 aa19.09■□□□□ 0.65
COL16A1-216ENST00000529928 SLC4A7Q9Y6M7 1214 aa19.09■□□□□ 0.65
COL16A1-216ENST00000529928 LRRC37A2A6NM11 1700 aa19.08■□□□□ 0.65
COL16A1-216ENST00000529928 GBF1Q92538 1859 aa19.08■□□□□ 0.65
COL16A1-216ENST00000529928 TFAP4Q01664 338 aa19.08■□□□□ 0.64
COL16A1-216ENST00000529928 PPP2R2DQ66LE6 453 aa19.08■□□□□ 0.64
COL16A1-216ENST00000529928 MYO9BQ13459 2157 aa19.08■□□□□ 0.64
COL16A1-216ENST00000529928 MCCP23508 829 aa19.07■□□□□ 0.64
COL16A1-216ENST00000529928 TAPT1Q6NXT6 567 aa19.07■□□□□ 0.64
COL16A1-216ENST00000529928 NAPBQ9H115 298 aa19.07■□□□□ 0.64
COL16A1-216ENST00000529928 VTA1Q9NP79 307 aa19.07■□□□□ 0.64
COL16A1-216ENST00000529928 PDGFCQ9NRA1 345 aa19.07■□□□□ 0.64
COL16A1-216ENST00000529928 CYP39A1Q9NYL5 469 aa19.07■□□□□ 0.64
COL16A1-216ENST00000529928 PCDHA11Q9Y5I1 949 aa19.07■□□□□ 0.64
COL16A1-216ENST00000529928 CHD9Q3L8U1 2897 aa19.07■□□□□ 0.64
COL16A1-216ENST00000529928 PFKMP08237 780 aa19.06■□□□□ 0.64
COL16A1-216ENST00000529928 RABGGTBP53611 331 aa19.06■□□□□ 0.64
COL16A1-216ENST00000529928 PSMC6P62333 389 aa19.06■□□□□ 0.64
COL16A1-216ENST00000529928 PPARAQ07869 468 aa19.06■□□□□ 0.64
COL16A1-216ENST00000529928 RCSD1Q6JBY9 416 aa19.06■□□□□ 0.64
COL16A1-216ENST00000529928 EEPD1Q7L9B9 569 aa19.06■□□□□ 0.64
COL16A1-216ENST00000529928 FBXO16Q8IX29 292 aaPredicted RBP19.06■□□□□ 0.64
COL16A1-216ENST00000529928 STX8Q9UNK0 236 aa19.06■□□□□ 0.64
COL16A1-216ENST00000529928 ZBBXA8MT70 800 aa19.05■□□□□ 0.64
COL16A1-216ENST00000529928 SUPT20HL2P0C7V6 817 aa19.05■□□□□ 0.64
COL16A1-216ENST00000529928 ATP2A2P16615 1042 aaKnown RBP19.05■□□□□ 0.64
COL16A1-216ENST00000529928 PTGS1P23219 599 aa19.05■□□□□ 0.64
COL16A1-216ENST00000529928 MUM1L1Q5H9M0 696 aa19.05■□□□□ 0.64
COL16A1-216ENST00000529928 TSHZ3Q63HK5 1081 aa19.05■□□□□ 0.64
COL16A1-216ENST00000529928 KIAA1211Q6ZU35 1233 aa19.05■□□□□ 0.64
COL16A1-216ENST00000529928 KCTD1Q719H9 257 aa19.05■□□□□ 0.64
COL16A1-216ENST00000529928 MORC4Q8TE76 937 aa19.05■□□□□ 0.64
COL16A1-216ENST00000529928 SCLYQ96I15 445 aa19.05■□□□□ 0.64
COL16A1-216ENST00000529928 ALDH8A1Q9H2A2 487 aaPredicted RBP19.05■□□□□ 0.64
COL16A1-216ENST00000529928 POLR3EQ9NVU0 708 aa19.05■□□□□ 0.64
COL16A1-216ENST00000529928 PRR12Q9ULL5 1215 aa19.05■□□□□ 0.64
COL16A1-216ENST00000529928 DDX49Q9Y6V7 483 aaKnown RBP19.05■□□□□ 0.64
COL16A1-216ENST00000529928 AAK1Q2M2I8 961 aa19.04■□□□□ 0.64
COL16A1-216ENST00000529928 DUSP28Q4G0W2 176 aa19.04■□□□□ 0.64
COL16A1-216ENST00000529928 NSMFQ6X4W1 530 aa19.04■□□□□ 0.64
COL16A1-216ENST00000529928 CHMP4CQ96CF2 233 aa19.04■□□□□ 0.64
COL16A1-216ENST00000529928 ADD3Q9UEY8 706 aaKnown RBP19.04■□□□□ 0.64
COL16A1-216ENST00000529928 CCPG1Q9ULG6 757 aa19.04■□□□□ 0.64
COL16A1-216ENST00000529928 TSPY2A6NKD2 308 aa19.03■□□□□ 0.64
COL16A1-216ENST00000529928 MYOGP15173 224 aa19.03■□□□□ 0.64
COL16A1-216ENST00000529928 SNAP25P60880 206 aa19.03■□□□□ 0.64
COL16A1-216ENST00000529928 TMEM63BQ5T3F8 832 aa19.03■□□□□ 0.64
COL16A1-216ENST00000529928 MICALL1Q8N3F8 863 aa19.03■□□□□ 0.64
COL16A1-216ENST00000529928 VWCEQ96DN2 955 aa19.03■□□□□ 0.64
COL16A1-216ENST00000529928 SEC62Q99442 399 aaKnown RBP19.03■□□□□ 0.64
COL16A1-216ENST00000529928 DCTPP1Q9H773 170 aa19.03■□□□□ 0.64
COL16A1-216ENST00000529928 LOC102724159A0A0B4J2E5 919 aa19.02■□□□□ 0.64
COL16A1-216ENST00000529928 ICAM1P05362 532 aa19.02■□□□□ 0.64
COL16A1-216ENST00000529928 CPT1AP50416 773 aa19.02■□□□□ 0.64
COL16A1-216ENST00000529928 PWP2Q15269 919 aaKnown RBP19.02■□□□□ 0.64
COL16A1-216ENST00000529928 TMEM67Q5HYA8 995 aa19.02■□□□□ 0.64
COL16A1-216ENST00000529928 TRMT13Q9NUP7 481 aaKnown RBP19.02■□□□□ 0.64
COL16A1-216ENST00000529928 RCAN3Q9UKA8 241 aa19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms