RNA–Protein interactions for RNA: ENST00000529866.5

COPB1-207, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 729 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-207ENST00000529866 PHOSPHO2Q8TCD6 241 aa12.45□□□□□ -0.42
COPB1-207ENST00000529866 PANK1Q8TE04 598 aa12.45□□□□□ -0.42
COPB1-207ENST00000529866 ARNTL2Q8WYA1 636 aa12.45□□□□□ -0.42
COPB1-207ENST00000529866 ALDH8A1Q9H2A2 487 aaPredicted RBP12.45□□□□□ -0.42
COPB1-207ENST00000529866 BOLA2Q9H3K6 86 aa12.45□□□□□ -0.42
COPB1-207ENST00000529866 CLIP2Q9UDT6 1046 aa12.45□□□□□ -0.42
COPB1-207ENST00000529866 ISY1Q9ULR0 285 aaKnown RBP12.45□□□□□ -0.42
COPB1-207ENST00000529866 PARP14Q460N5 1801 aa12.44□□□□□ -0.42
COPB1-207ENST00000529866 GRIN2DO15399 1336 aa12.44□□□□□ -0.42
COPB1-207ENST00000529866 GPR37L1O60883 481 aa12.44□□□□□ -0.42
COPB1-207ENST00000529866 HMMRO75330 724 aa12.44□□□□□ -0.42
COPB1-207ENST00000529866 SMPD1P17405 629 aa12.44□□□□□ -0.42
COPB1-207ENST00000529866 RASA1P20936 1047 aa12.44□□□□□ -0.42
COPB1-207ENST00000529866 RFC2P35250 354 aa12.44□□□□□ -0.42
COPB1-207ENST00000529866 PSMC6P62333 389 aa12.44□□□□□ -0.42
COPB1-207ENST00000529866 TTLL4Q14679 1199 aa12.44□□□□□ -0.42
COPB1-207ENST00000529866 TKFCQ3LXA3 575 aa12.44□□□□□ -0.42
COPB1-207ENST00000529866 SLFNL1Q499Z3 407 aa12.44□□□□□ -0.42
COPB1-207ENST00000529866 SBK1Q52WX2 424 aa12.44□□□□□ -0.42
COPB1-207ENST00000529866 IQSEC1Q6DN90 963 aa12.44□□□□□ -0.42
COPB1-207ENST00000529866 DEFB128Q7Z7B8 93 aa12.44□□□□□ -0.42
COPB1-207ENST00000529866 GMCL1P1Q8NEA9 526 aa12.44□□□□□ -0.42
COPB1-207ENST00000529866 AGBL1Q96MI9 1066 aa12.44□□□□□ -0.42
COPB1-207ENST00000529866 BCL11AQ9H165 835 aa12.44□□□□□ -0.42
COPB1-207ENST00000529866 CERS4Q9HA82 394 aa12.44□□□□□ -0.42
COPB1-207ENST00000529866 A1CFQ9NQ94 594 aaKnown RBP12.44□□□□□ -0.42
COPB1-207ENST00000529866 RNF146Q9NTX7 359 aa12.44□□□□□ -0.42
COPB1-207ENST00000529866 TNKSO95271 1327 aa12.43□□□□□ -0.42
COPB1-207ENST00000529866 ZNFX1Q9P2E3 1918 aaKnown RBP12.43□□□□□ -0.42
COPB1-207ENST00000529866 RFXAPO00287 272 aa12.43□□□□□ -0.42
COPB1-207ENST00000529866 TLL1O43897 1013 aa12.43□□□□□ -0.42
COPB1-207ENST00000529866 TTLL1O95922 423 aa12.43□□□□□ -0.42
COPB1-207ENST00000529866 BMP3P12645 472 aa12.43□□□□□ -0.42
COPB1-207ENST00000529866 ATP5JP18859 108 aa12.43□□□□□ -0.42
COPB1-207ENST00000529866 STAT2P52630 851 aa12.43□□□□□ -0.42
COPB1-207ENST00000529866 IKQ13123 557 aaPredicted RBP12.43□□□□□ -0.42
COPB1-207ENST00000529866 GIMAP6Q6P9H5 292 aa12.43□□□□□ -0.42
COPB1-207ENST00000529866 FAM160B2Q86V87 743 aa12.43□□□□□ -0.42
COPB1-207ENST00000529866 FBXO16Q8IX29 292 aaPredicted RBP12.43□□□□□ -0.42
COPB1-207ENST00000529866 HAUS7Q99871 368 aa12.43□□□□□ -0.42
COPB1-207ENST00000529866 VTA1Q9NP79 307 aa12.43□□□□□ -0.42
COPB1-207ENST00000529866 POLR3EQ9NVU0 708 aa12.43□□□□□ -0.42
COPB1-207ENST00000529866 COL11A1P12107 1806 aaPredicted RBP12.43□□□□□ -0.42
COPB1-207ENST00000529866 SOWAHBA6NEL2 793 aa12.42□□□□□ -0.42
COPB1-207ENST00000529866 EPOPA6NHQ4 379 aa12.42□□□□□ -0.42
COPB1-207ENST00000529866 MINDY4BA8MYZ0 360 aa12.42□□□□□ -0.42
COPB1-207ENST00000529866 RAB11FIP3O75154 756 aa12.42□□□□□ -0.42
COPB1-207ENST00000529866 CYP2C9P11712 490 aa12.42□□□□□ -0.42
COPB1-207ENST00000529866 BRDTQ58F21 947 aaPredicted RBP12.42□□□□□ -0.42
COPB1-207ENST00000529866 SLFN13Q68D06 897 aa12.42□□□□□ -0.42
COPB1-207ENST00000529866 EEPD1Q7L9B9 569 aa12.42□□□□□ -0.42
COPB1-207ENST00000529866 ZNF444Q8N0Y2 327 aaPredicted RBP12.42□□□□□ -0.42
COPB1-207ENST00000529866 STK11IPQ8N1F8 1099 aa12.42□□□□□ -0.42
COPB1-207ENST00000529866 LRRC47Q8N1G4 583 aaKnown RBP12.42□□□□□ -0.42
COPB1-207ENST00000529866 RETREG2Q8NC44 543 aa12.42□□□□□ -0.42
COPB1-207ENST00000529866 CHURC1Q8WUH1 139 aa12.42□□□□□ -0.42
COPB1-207ENST00000529866 MKL1Q969V6 931 aa12.42□□□□□ -0.42
COPB1-207ENST00000529866 CEP95Q96GE4 821 aa12.42□□□□□ -0.42
COPB1-207ENST00000529866 PUS7LQ9H0K6 701 aaKnown RBP12.42□□□□□ -0.42
COPB1-207ENST00000529866 GPHNQ9NQX3 736 aaPredicted RBP12.42□□□□□ -0.42
COPB1-207ENST00000529866 TRMT13Q9NUP7 481 aaKnown RBP12.42□□□□□ -0.42
COPB1-207ENST00000529866 MTMR4Q9NYA4 1195 aa12.42□□□□□ -0.42
COPB1-207ENST00000529866 TRANK1O15050 2925 aa12.42□□□□□ -0.42
COPB1-207ENST00000529866 RAD50Q92878 1312 aa12.41□□□□□ -0.42
COPB1-207ENST00000529866 IGKV6D-41A0A0C4DH26 115 aa12.41□□□□□ -0.42
COPB1-207ENST00000529866 FAM86C2PA6NEL3 165 aa12.41□□□□□ -0.42
COPB1-207ENST00000529866 TMEM232C9JQI7 657 aa12.41□□□□□ -0.42
COPB1-207ENST00000529866 PITPNM1O00562 1244 aa12.41□□□□□ -0.42
COPB1-207ENST00000529866 BAIAP3O94812 1187 aa12.41□□□□□ -0.42
COPB1-207ENST00000529866 ALAS1P13196 640 aa12.41□□□□□ -0.42
COPB1-207ENST00000529866 CPT1AP50416 773 aa12.41□□□□□ -0.42
COPB1-207ENST00000529866 TAP1Q03518 808 aa12.41□□□□□ -0.42
COPB1-207ENST00000529866 GRB10Q13322 594 aa12.41□□□□□ -0.42
COPB1-207ENST00000529866 KIAA1211Q6ZU35 1233 aa12.41□□□□□ -0.42
COPB1-207ENST00000529866 HERC6Q8IVU3 1022 aa12.41□□□□□ -0.42
COPB1-207ENST00000529866 VWCEQ96DN2 955 aa12.41□□□□□ -0.42
COPB1-207ENST00000529866 TRERF1Q96PN7 1200 aa12.41□□□□□ -0.42
COPB1-207ENST00000529866 FTOQ9C0B1 505 aaKnown RBP eCLIP12.41□□□□□ -0.423e-14■□□□□ 8.6
COPB1-207ENST00000529866 PDGFCQ9NRA1 345 aa12.41□□□□□ -0.42
COPB1-207ENST00000529866 MYH8P13535 1937 aa12.41□□□□□ -0.42
COPB1-207ENST00000529866 PI4K2BG5E9Z4 385 aa12.4□□□□□ -0.42
COPB1-207ENST00000529866 CHGBP05060 677 aa12.4□□□□□ -0.42
COPB1-207ENST00000529866 SLC1A4P43007 532 aa12.4□□□□□ -0.42
COPB1-207ENST00000529866 KCNJ6P48051 423 aa12.4□□□□□ -0.42
COPB1-207ENST00000529866 TDO2P48775 406 aa12.4□□□□□ -0.42
COPB1-207ENST00000529866 BFSP2Q13515 415 aa12.4□□□□□ -0.42
COPB1-207ENST00000529866 DUSP28Q4G0W2 176 aa12.4□□□□□ -0.42
COPB1-207ENST00000529866 FAM47CQ5HY64 1035 aa12.4□□□□□ -0.42
COPB1-207ENST00000529866 PPP4R3BQ5MIZ7 849 aa12.4□□□□□ -0.42
COPB1-207ENST00000529866 KRT40Q6A162 431 aa12.4□□□□□ -0.42
COPB1-207ENST00000529866 TAPT1Q6NXT6 567 aa12.4□□□□□ -0.42
COPB1-207ENST00000529866 STAG1Q8WVM7 1258 aa12.4□□□□□ -0.42
COPB1-207ENST00000529866 STRBPQ96SI9 672 aaKnown RBP12.4□□□□□ -0.42
COPB1-207ENST00000529866 MTG1Q9BT17 334 aaPredicted RBP12.4□□□□□ -0.42
COPB1-207ENST00000529866 C11orf16Q9NQ32 467 aa12.4□□□□□ -0.42
COPB1-207ENST00000529866 CYP39A1Q9NYL5 469 aa12.4□□□□□ -0.42
COPB1-207ENST00000529866 LMCD1Q9NZU5 365 aa12.4□□□□□ -0.42
COPB1-207ENST00000529866 NOD1Q9Y239 953 aa12.4□□□□□ -0.42
COPB1-207ENST00000529866 PRR33A8MZF0 331 aa12.39□□□□□ -0.43
COPB1-207ENST00000529866 PRDM1O75626 825 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms