RNA–Protein interactions for RNA: ENST00000529677.1

PACS1-208, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 3

Gene PACS1, Length 679 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-208ENST00000529677 RBPJLQ9UBG7 517 aa19.56■□□□□ 0.72
PACS1-208ENST00000529677 REV3LO60673 3130 aa19.56■□□□□ 0.72
PACS1-208ENST00000529677 NCOR1O75376 2440 aa19.55■□□□□ 0.72
PACS1-208ENST00000529677 K7ELQ4 463 aaPredicted RBP19.55■□□□□ 0.72
PACS1-208ENST00000529677 PARP1P09874 1014 aaKnown RBP19.55■□□□□ 0.72
PACS1-208ENST00000529677 BMP3P12645 472 aa19.55■□□□□ 0.72
PACS1-208ENST00000529677 KIF5BP33176 963 aa19.55■□□□□ 0.72
PACS1-208ENST00000529677 SLC1A4P43007 532 aa19.55■□□□□ 0.72
PACS1-208ENST00000529677 ST3GAL1Q11201 340 aa19.55■□□□□ 0.72
PACS1-208ENST00000529677 GRIN2CQ14957 1233 aa19.55■□□□□ 0.72
PACS1-208ENST00000529677 ZYXQ15942 572 aaKnown RBP19.55■□□□□ 0.72
PACS1-208ENST00000529677 RTN1Q16799 776 aa19.55■□□□□ 0.72
PACS1-208ENST00000529677 BTNL9Q6UXG8 535 aa19.55■□□□□ 0.72
PACS1-208ENST00000529677 NOL8Q76FK4 1167 aaKnown RBP19.55■□□□□ 0.72
PACS1-208ENST00000529677 CTCFLQ8NI51 663 aaPredicted RBP19.55■□□□□ 0.72
PACS1-208ENST00000529677 TMOD4Q9NZQ9 345 aa19.55■□□□□ 0.72
PACS1-208ENST00000529677 CCDC196A0A1B0GTZ2 297 aa19.54■□□□□ 0.72
PACS1-208ENST00000529677 RXRAP19793 462 aa19.54■□□□□ 0.72
PACS1-208ENST00000529677 SMARCA1P28370 1054 aa19.54■□□□□ 0.72
PACS1-208ENST00000529677 CDC27P30260 824 aa19.54■□□□□ 0.72
PACS1-208ENST00000529677 EPHB4P54760 987 aa19.54■□□□□ 0.72
PACS1-208ENST00000529677 SCRN1Q12765 414 aa19.54■□□□□ 0.72
PACS1-208ENST00000529677 TMTC3Q6ZXV5 915 aa19.54■□□□□ 0.72
PACS1-208ENST00000529677 RAB11FIP4Q86YS3 637 aa19.54■□□□□ 0.72
PACS1-208ENST00000529677 SPICE1Q8N0Z3 855 aa19.54■□□□□ 0.72
PACS1-208ENST00000529677 NUP133Q8WUM0 1156 aa19.54■□□□□ 0.72
PACS1-208ENST00000529677 BADQ92934 168 aa19.54■□□□□ 0.72
PACS1-208ENST00000529677 SLKQ9H2G2 1235 aaPredicted RBP19.54■□□□□ 0.72
PACS1-208ENST00000529677 RBM19Q9Y4C8 960 aaKnown RBP19.54■□□□□ 0.72
PACS1-208ENST00000529677 A0A0G2JMZ2 1700 aa19.54■□□□□ 0.72
PACS1-208ENST00000529677 TMEM265A0A087WTH1 108 aa19.53■□□□□ 0.72
PACS1-208ENST00000529677 IGHA2P01877 340 aa19.53■□□□□ 0.72
PACS1-208ENST00000529677 HOXA7P31268 230 aaPredicted RBP19.53■□□□□ 0.72
PACS1-208ENST00000529677 GNAQP50148 359 aa19.53■□□□□ 0.72
PACS1-208ENST00000529677 FUT2Q10981 343 aa19.53■□□□□ 0.72
PACS1-208ENST00000529677 CUL4AQ13619 759 aa19.53■□□□□ 0.72
PACS1-208ENST00000529677 NTRK3Q16288 839 aa19.53■□□□□ 0.72
PACS1-208ENST00000529677 FAM83BQ5T0W9 1011 aa19.53■□□□□ 0.72
PACS1-208ENST00000529677 GPR142Q7Z601 462 aa19.53■□□□□ 0.72
PACS1-208ENST00000529677 SH3RF1Q7Z6J0 888 aa19.53■□□□□ 0.72
PACS1-208ENST00000529677 HSCBQ8IWL3 235 aa19.53■□□□□ 0.72
PACS1-208ENST00000529677 STAG2Q8N3U4 1231 aa19.53■□□□□ 0.72
PACS1-208ENST00000529677 TRPV1Q8NER1 839 aa19.53■□□□□ 0.72
PACS1-208ENST00000529677 CHMP4CQ96CF2 233 aa19.53■□□□□ 0.72
PACS1-208ENST00000529677 FAM122AQ96E09 287 aa19.53■□□□□ 0.72
PACS1-208ENST00000529677 NUP88Q99567 741 aaPredicted RBP19.53■□□□□ 0.72
PACS1-208ENST00000529677 LZTS2Q9BRK4 669 aa19.53■□□□□ 0.72
PACS1-208ENST00000529677 XIRP2A4UGR9 3374 aa19.52■□□□□ 0.72
PACS1-208ENST00000529677 ITGB8P26012 769 aa19.52■□□□□ 0.72
PACS1-208ENST00000529677 HERVK_113P62684 666 aa19.52■□□□□ 0.72
PACS1-208ENST00000529677 PABPC4Q13310 644 aaKnown RBP eCLIP19.52■□□□□ 0.72
PACS1-208ENST00000529677 CCDC96Q2M329 555 aa19.52■□□□□ 0.72
PACS1-208ENST00000529677 SLC35G1Q2M3R5 365 aa19.52■□□□□ 0.72
PACS1-208ENST00000529677 TRMT44Q8IYL2 757 aaKnown RBP19.52■□□□□ 0.72
PACS1-208ENST00000529677 APBA2Q99767 749 aa19.52■□□□□ 0.72
PACS1-208ENST00000529677 SPZ1Q9BXG8 430 aa19.52■□□□□ 0.72
PACS1-208ENST00000529677 NCOA5Q9HCD5 579 aaKnown RBP19.52■□□□□ 0.72
PACS1-208ENST00000529677 FEM1BQ9UK73 627 aa19.52■□□□□ 0.72
PACS1-208ENST00000529677 NAP1L2Q9ULW6 460 aaPredicted RBP19.52■□□□□ 0.72
PACS1-208ENST00000529677 TRIM43BA6NCK2 446 aa19.51■□□□□ 0.71
PACS1-208ENST00000529677 USP17L15C9J2P7 530 aa19.51■□□□□ 0.71
PACS1-208ENST00000529677 USP17L13C9JLJ4 530 aa19.51■□□□□ 0.71
PACS1-208ENST00000529677 USP17L11C9JVI0 530 aa19.51■□□□□ 0.71
PACS1-208ENST00000529677 KLRF2D3W0D1 207 aa19.51■□□□□ 0.71
PACS1-208ENST00000529677 USP17L18D6R9N7 530 aa19.51■□□□□ 0.71
PACS1-208ENST00000529677 USP17L22D6RA61 530 aa19.51■□□□□ 0.71
PACS1-208ENST00000529677 USP17L17D6RBQ6 530 aa19.51■□□□□ 0.71
PACS1-208ENST00000529677 USP17L19D6RCP7 530 aa19.51■□□□□ 0.71
PACS1-208ENST00000529677 USP17L20D6RJB6 530 aa19.51■□□□□ 0.71
PACS1-208ENST00000529677 DHX16O60231 1041 aaKnown RBP19.51■□□□□ 0.71
PACS1-208ENST00000529677 IFNAR1P17181 557 aa19.51■□□□□ 0.71
PACS1-208ENST00000529677 ADD1P35611 737 aaKnown RBP19.51■□□□□ 0.71
PACS1-208ENST00000529677 RGS2P41220 211 aa19.51■□□□□ 0.71
PACS1-208ENST00000529677 CCT2P78371 535 aaKnown RBP19.51■□□□□ 0.71
PACS1-208ENST00000529677 USP17L24Q0WX57 530 aa19.51■□□□□ 0.71
PACS1-208ENST00000529677 STK3Q13188 491 aa19.51■□□□□ 0.71
PACS1-208ENST00000529677 SNX17Q15036 470 aa19.51■□□□□ 0.71
PACS1-208ENST00000529677 CATSPERGQ6ZRH7 1159 aa19.51■□□□□ 0.71
PACS1-208ENST00000529677 KCTD1Q719H9 257 aa19.51■□□□□ 0.71
PACS1-208ENST00000529677 FAM160B2Q86V87 743 aa19.51■□□□□ 0.71
PACS1-208ENST00000529677 CCDC144CPQ8IYA2 1237 aa19.51■□□□□ 0.71
PACS1-208ENST00000529677 NECAB1Q8N987 351 aa19.51■□□□□ 0.71
PACS1-208ENST00000529677 GPRC5AQ8NFJ5 357 aa19.51■□□□□ 0.71
PACS1-208ENST00000529677 TRIM43Q96BQ3 446 aaPredicted RBP19.51■□□□□ 0.71
PACS1-208ENST00000529677 RPAP3Q9H6T3 665 aaPredicted RBP19.51■□□□□ 0.71
PACS1-208ENST00000529677 PDLIM7Q9NR12 457 aa19.51■□□□□ 0.71
PACS1-208ENST00000529677 DDX20Q9UHI6 824 aaKnown RBP19.51■□□□□ 0.71
PACS1-208ENST00000529677 MTMR7Q9Y216 660 aa19.51■□□□□ 0.71
PACS1-208ENST00000529677 ATP11BQ9Y2G3 1177 aa19.51■□□□□ 0.71
PACS1-208ENST00000529677 FRMPD2Q68DX3 1309 aaPredicted RBP19.51■□□□□ 0.71
PACS1-208ENST00000529677 CNTNAP5Q8WYK1 1306 aa19.51■□□□□ 0.71
PACS1-208ENST00000529677 TMEM232C9JQI7 657 aa19.5■□□□□ 0.71
PACS1-208ENST00000529677 DNM1LO00429 736 aa19.5■□□□□ 0.71
PACS1-208ENST00000529677 RAD21O60216 631 aa19.5■□□□□ 0.71
PACS1-208ENST00000529677 PLEKHA8P1O95397 391 aa19.5■□□□□ 0.71
PACS1-208ENST00000529677 GOLGA8HP0CJ92 632 aa19.5■□□□□ 0.71
PACS1-208ENST00000529677 ERVK-9P63128 1117 aa19.5■□□□□ 0.71
PACS1-208ENST00000529677 ERVK-24P63145 666 aa19.5■□□□□ 0.71
PACS1-208ENST00000529677 SRBD1Q8N5C6 995 aaKnown RBP19.5■□□□□ 0.71
PACS1-208ENST00000529677 LLPHQ9BRT6 129 aaKnown RBP19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms