RNA–Protein interactions for RNA: ENST00000529046.5

CSDE1-212, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-212ENST00000529046 C6orf15Q6UXA7 325 aaPredicted RBP7.23□□□□□ -1.25
CSDE1-212ENST00000529046 SYDE1Q6ZW31 735 aaPredicted RBP7.23□□□□□ -1.25
CSDE1-212ENST00000529046 FAM178BQ8IXR5 827 aa7.23□□□□□ -1.25
CSDE1-212ENST00000529046 CCDC144CPQ8IYA2 1237 aa7.23□□□□□ -1.25
CSDE1-212ENST00000529046 G6PC3Q9BUM1 346 aa7.23□□□□□ -1.25
CSDE1-212ENST00000529046 KLHL25Q9H0H3 589 aa7.23□□□□□ -1.25
CSDE1-212ENST00000529046 CWC22Q9HCG8 908 aaKnown RBP7.23□□□□□ -1.25
CSDE1-212ENST00000529046 DCP1AQ9NPI6 582 aaPredicted RBP7.23□□□□□ -1.25
CSDE1-212ENST00000529046 SIRPGQ9P1W8 387 aa7.23□□□□□ -1.25
CSDE1-212ENST00000529046 GPR160Q9UJ42 338 aa7.23□□□□□ -1.25
CSDE1-212ENST00000529046 MINPP1Q9UNW1 487 aa7.23□□□□□ -1.25
CSDE1-212ENST00000529046 GOLGA3Q08378 1498 aa7.23□□□□□ -1.25
CSDE1-212ENST00000529046 PRXQ9BXM0 1461 aa7.23□□□□□ -1.25
CSDE1-212ENST00000529046 EPRSP07814 1512 aaKnown RBP7.22□□□□□ -1.25
CSDE1-212ENST00000529046 ARID1BQ8NFD5 2236 aaPredicted RBP7.22□□□□□ -1.25
CSDE1-212ENST00000529046 A0A087WZG4 1122 aa7.22□□□□□ -1.25
CSDE1-212ENST00000529046 DBX1A6NMT0 343 aa7.22□□□□□ -1.25
CSDE1-212ENST00000529046 MEIS1O00470 390 aa7.22□□□□□ -1.25
CSDE1-212ENST00000529046 FZD5Q13467 585 aa7.22□□□□□ -1.25
CSDE1-212ENST00000529046 ZNF669Q96BR6 464 aaPredicted RBP7.22□□□□□ -1.25
CSDE1-212ENST00000529046 HAUS7Q99871 368 aa7.22□□□□□ -1.25
CSDE1-212ENST00000529046 CCDC113Q9H0I3 377 aa7.22□□□□□ -1.25
CSDE1-212ENST00000529046 SLC6A17Q9H1V8 727 aa7.22□□□□□ -1.25
CSDE1-212ENST00000529046 PCDHB10Q9UN67 800 aa7.22□□□□□ -1.25
CSDE1-212ENST00000529046 KIAA0556O60303 1618 aa7.21□□□□□ -1.26
CSDE1-212ENST00000529046 TMEM82A0PJX8 343 aa7.21□□□□□ -1.26
CSDE1-212ENST00000529046 IGSF3O75054 1194 aa7.21□□□□□ -1.26
CSDE1-212ENST00000529046 USP2O75604 605 aaPredicted RBP7.21□□□□□ -1.26
CSDE1-212ENST00000529046 GJB6O95452 261 aa7.21□□□□□ -1.26
CSDE1-212ENST00000529046 CAPNS1P04632 268 aa7.21□□□□□ -1.26
CSDE1-212ENST00000529046 SNX17Q15036 470 aa7.21□□□□□ -1.26
CSDE1-212ENST00000529046 GNPTABQ3T906 1256 aa7.21□□□□□ -1.26
CSDE1-212ENST00000529046 TDRD10Q5VZ19 366 aaKnown RBP7.21□□□□□ -1.26
CSDE1-212ENST00000529046 MAP6Q96JE9 813 aa7.21□□□□□ -1.26
CSDE1-212ENST00000529046 DNAJC2Q99543 621 aaKnown RBP7.21□□□□□ -1.26
CSDE1-212ENST00000529046 TEX14Q8IWB6 1497 aa7.21□□□□□ -1.26
CSDE1-212ENST00000529046 B2RBV5 119 aa7.2□□□□□ -1.26
CSDE1-212ENST00000529046 PSPNO60542 156 aa7.2□□□□□ -1.26
CSDE1-212ENST00000529046 TSPAN15O95858 294 aa7.2□□□□□ -1.26
CSDE1-212ENST00000529046 ENDOUP21128 410 aaKnown RBP7.2□□□□□ -1.26
CSDE1-212ENST00000529046 KIR2DL1P43626 348 aaPredicted RBP7.2□□□□□ -1.26
CSDE1-212ENST00000529046 KIR2DL2P43627 348 aaPredicted RBP7.2□□□□□ -1.26
CSDE1-212ENST00000529046 RAP1GAPP47736 663 aa7.2□□□□□ -1.26
CSDE1-212ENST00000529046 RASA3Q14644 834 aa7.2□□□□□ -1.26
CSDE1-212ENST00000529046 DCAF15Q66K64 600 aa7.2□□□□□ -1.26
CSDE1-212ENST00000529046 KIAA1211LQ6NV74 962 aa7.2□□□□□ -1.26
CSDE1-212ENST00000529046 IRF2BP1Q8IU81 584 aa7.2□□□□□ -1.26
CSDE1-212ENST00000529046 FAM9AQ8IZU1 332 aaPredicted RBP7.2□□□□□ -1.26
CSDE1-212ENST00000529046 INTS4Q96HW7 963 aaKnown RBP7.2□□□□□ -1.26
CSDE1-212ENST00000529046 DSCC1Q9BVC3 393 aa7.2□□□□□ -1.26
CSDE1-212ENST00000529046 LNPKQ9C0E8 428 aa7.2□□□□□ -1.26
CSDE1-212ENST00000529046 EPN3Q9H201 632 aa7.2□□□□□ -1.26
CSDE1-212ENST00000529046 GP6Q9HCN6 339 aa7.2□□□□□ -1.26
CSDE1-212ENST00000529046 YBX2Q9Y2T7 364 aaKnown RBP7.2□□□□□ -1.26
CSDE1-212ENST00000529046 ZNF451Q9Y4E5 1061 aa7.2□□□□□ -1.26
CSDE1-212ENST00000529046 FHOD1Q9Y613 1164 aa7.2□□□□□ -1.26
CSDE1-212ENST00000529046 ANKRD34BA5PLL1 514 aa7.19□□□□□ -1.26
CSDE1-212ENST00000529046 NFIBO00712 420 aa7.19□□□□□ -1.26
CSDE1-212ENST00000529046 EPHX1P07099 455 aa7.19□□□□□ -1.26
CSDE1-212ENST00000529046 CD247P20963 164 aa7.19□□□□□ -1.26
CSDE1-212ENST00000529046 BMP8BP34820 402 aa7.19□□□□□ -1.26
CSDE1-212ENST00000529046 CTSKP43235 329 aa7.19□□□□□ -1.26
CSDE1-212ENST00000529046 SLC14A2Q15849 920 aa7.19□□□□□ -1.26
CSDE1-212ENST00000529046 LARP1BQ659C4 914 aaKnown RBP7.19□□□□□ -1.26
CSDE1-212ENST00000529046 CRTC3Q6UUV7 619 aa7.19□□□□□ -1.26
CSDE1-212ENST00000529046 ZPBP2Q6X784 338 aa7.19□□□□□ -1.26
CSDE1-212ENST00000529046 CEP128Q6ZU80 1094 aa7.19□□□□□ -1.26
CSDE1-212ENST00000529046 ST13P5Q8NFI4 369 aaPredicted RBP7.19□□□□□ -1.26
CSDE1-212ENST00000529046 FCRL2Q96LA5 508 aaPredicted RBP7.19□□□□□ -1.26
CSDE1-212ENST00000529046 TRIM55Q9BYV6 548 aa7.19□□□□□ -1.26
CSDE1-212ENST00000529046 OSBPL2Q9H1P3 480 aa7.19□□□□□ -1.26
CSDE1-212ENST00000529046 KCNK12Q9HB15 430 aa7.19□□□□□ -1.26
CSDE1-212ENST00000529046 WHRNQ9P202 907 aa7.19□□□□□ -1.26
CSDE1-212ENST00000529046 MAP3K4Q9Y6R4 1608 aa7.19□□□□□ -1.26
CSDE1-212ENST00000529046 PPRC1Q5VV67 1664 aaKnown RBP7.19□□□□□ -1.26
CSDE1-212ENST00000529046 WDR7Q9Y4E6 1490 aa7.18□□□□□ -1.26
CSDE1-212ENST00000529046 MAGI3Q5TCQ9 1506 aa7.18□□□□□ -1.26
CSDE1-212ENST00000529046 NRDCO43847 1150 aa7.18□□□□□ -1.26
CSDE1-212ENST00000529046 SUSD5O60279 629 aa7.18□□□□□ -1.26
CSDE1-212ENST00000529046 ZNF445P59923 1031 aa7.18□□□□□ -1.26
CSDE1-212ENST00000529046 RASGRF1Q13972 1273 aa7.18□□□□□ -1.26
CSDE1-212ENST00000529046 SHISA4Q96DD7 197 aa7.18□□□□□ -1.26
CSDE1-212ENST00000529046 RCC1LQ96I51 464 aaKnown RBP7.18□□□□□ -1.26
CSDE1-212ENST00000529046 HHIPL1Q96JK4 782 aa7.18□□□□□ -1.26
CSDE1-212ENST00000529046 SLC26A8Q96RN1 970 aa7.18□□□□□ -1.26
CSDE1-212ENST00000529046 FAM86C1Q9NVL1 165 aa7.18□□□□□ -1.26
CSDE1-212ENST00000529046 R3HCC1Q9Y3T6 440 aaKnown RBP7.18□□□□□ -1.26
CSDE1-212ENST00000529046 ABCA8O94911 1581 aa7.17□□□□□ -1.26
CSDE1-212ENST00000529046 ZCCHC11Q5TAX3 1644 aaKnown RBP7.17□□□□□ -1.26
CSDE1-212ENST00000529046 NOTOA8MTQ0 251 aa7.17□□□□□ -1.26
CSDE1-212ENST00000529046 ZNF205O95201 554 aa7.17□□□□□ -1.26
CSDE1-212ENST00000529046 TP53P04637 393 aaPredicted RBP7.17□□□□□ -1.26
CSDE1-212ENST00000529046 GSNP06396 782 aa7.17□□□□□ -1.26
CSDE1-212ENST00000529046 TMEM253P0C7T8 217 aa7.17□□□□□ -1.26
CSDE1-212ENST00000529046 PDE6BP35913 854 aa7.17□□□□□ -1.26
CSDE1-212ENST00000529046 GALK1P51570 392 aa7.17□□□□□ -1.26
CSDE1-212ENST00000529046 EEPD1Q7L9B9 569 aa7.17□□□□□ -1.26
CSDE1-212ENST00000529046 NLRX1Q86UT6 975 aa7.17□□□□□ -1.26
CSDE1-212ENST00000529046 ARHGEF39Q8N4T4 335 aa7.17□□□□□ -1.26
CSDE1-212ENST00000529046 CDADC1Q9BWV3 514 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms