RNA–Protein interactions for RNA: ENST00000529002.2

SSRP1-204, Transcript of structure specific recognition protein 1, humanhuman

TSL 5

Gene SSRP1, Length 648 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-204ENST00000529002 CHST13Q8NET6 341 aa22.73■■□□□ 1.23
SSRP1-204ENST00000529002 PANK1Q8TE04 598 aa22.73■■□□□ 1.23
SSRP1-204ENST00000529002 DDRGK1Q96HY6 314 aa22.73■■□□□ 1.23
SSRP1-204ENST00000529002 PTPRSQ13332 1948 aa22.72■■□□□ 1.23
SSRP1-204ENST00000529002 TRIP12Q14669 1992 aaPredicted RBP22.72■■□□□ 1.23
SSRP1-204ENST00000529002 AAK1Q2M2I8 961 aa22.72■■□□□ 1.23
SSRP1-204ENST00000529002 LRRC47Q8N1G4 583 aaKnown RBP22.72■■□□□ 1.23
SSRP1-204ENST00000529002 PPP1R13LQ8WUF5 828 aa22.72■■□□□ 1.23
SSRP1-204ENST00000529002 KIF1BPQ96EK5 621 aa22.72■■□□□ 1.23
SSRP1-204ENST00000529002 FBXO40Q9UH90 709 aa22.72■■□□□ 1.23
SSRP1-204ENST00000529002 TRANK1O15050 2925 aa22.71■■□□□ 1.23
SSRP1-204ENST00000529002 FAM86C2PA6NEL3 165 aa22.71■■□□□ 1.23
SSRP1-204ENST00000529002 MINDY4BA8MYZ0 360 aa22.71■■□□□ 1.23
SSRP1-204ENST00000529002 CYP2C9P11712 490 aa22.71■■□□□ 1.23
SSRP1-204ENST00000529002 UBE3CQ15386 1083 aa22.71■■□□□ 1.23
SSRP1-204ENST00000529002 HSP90AB4PQ58FF6 505 aa22.71■■□□□ 1.23
SSRP1-204ENST00000529002 SPRED2Q7Z698 418 aa22.71■■□□□ 1.23
SSRP1-204ENST00000529002 RPUSD2Q8IZ73 545 aaKnown RBP22.71■■□□□ 1.23
SSRP1-204ENST00000529002 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.71■■□□□ 1.23
SSRP1-204ENST00000529002 MKNK2Q9HBH9 465 aa22.71■■□□□ 1.23
SSRP1-204ENST00000529002 C11orf16Q9NQ32 467 aa22.71■■□□□ 1.23
SSRP1-204ENST00000529002 A1CFQ9NQ94 594 aaKnown RBP22.71■■□□□ 1.23
SSRP1-204ENST00000529002 TRMT13Q9NUP7 481 aaKnown RBP22.71■■□□□ 1.23
SSRP1-204ENST00000529002 IGKV6D-41A0A0C4DH26 115 aa22.7■■□□□ 1.22
SSRP1-204ENST00000529002 RBAK-RBAKDNI3L0D1 243 aa22.7■■□□□ 1.22
SSRP1-204ENST00000529002 TLL1O43897 1013 aa22.7■■□□□ 1.22
SSRP1-204ENST00000529002 PRDM1O75626 825 aa22.7■■□□□ 1.22
SSRP1-204ENST00000529002 CABYRO75952 493 aa22.7■■□□□ 1.22
SSRP1-204ENST00000529002 TMEM67Q5HYA8 995 aa22.7■■□□□ 1.22
SSRP1-204ENST00000529002 FBXO16Q8IX29 292 aaPredicted RBP22.7■■□□□ 1.22
SSRP1-204ENST00000529002 PURBQ96QR8 312 aaKnown RBP22.7■■□□□ 1.22
SSRP1-204ENST00000529002 HAUS7Q99871 368 aa22.7■■□□□ 1.22
SSRP1-204ENST00000529002 AP5M1Q9H0R1 490 aa22.7■■□□□ 1.22
SSRP1-204ENST00000529002 ARPP21Q9UBL0 812 aaPredicted RBP22.7■■□□□ 1.22
SSRP1-204ENST00000529002 FEM1BQ9UK73 627 aa22.7■■□□□ 1.22
SSRP1-204ENST00000529002 MUC6Q6W4X9 2439 aa22.7■■□□□ 1.22
SSRP1-204ENST00000529002 COL4A4P53420 1690 aaPredicted RBP22.69■■□□□ 1.22
SSRP1-204ENST00000529002 ATP5JP18859 108 aa22.69■■□□□ 1.22
SSRP1-204ENST00000529002 SNAP25P60880 206 aa22.69■■□□□ 1.22
SSRP1-204ENST00000529002 TAPT1Q6NXT6 567 aa22.69■■□□□ 1.22
SSRP1-204ENST00000529002 CEP95Q96GE4 821 aa22.69■■□□□ 1.22
SSRP1-204ENST00000529002 ALDH8A1Q9H2A2 487 aaPredicted RBP22.69■■□□□ 1.22
SSRP1-204ENST00000529002 ACAD9Q9H845 621 aa22.69■■□□□ 1.22
SSRP1-204ENST00000529002 RNF146Q9NTX7 359 aa22.69■■□□□ 1.22
SSRP1-204ENST00000529002 HCN4Q9Y3Q4 1203 aa22.69■■□□□ 1.22
SSRP1-204ENST00000529002 ZNF536O15090 1300 aa22.68■■□□□ 1.22
SSRP1-204ENST00000529002 GSG1L2A8MUP6 293 aa22.68■■□□□ 1.22
SSRP1-204ENST00000529002 GTPBP6O43824 516 aaPredicted RBP22.68■■□□□ 1.22
SSRP1-204ENST00000529002 TMEM31Q5JXX7 168 aa22.68■■□□□ 1.22
SSRP1-204ENST00000529002 SIRT2Q8IXJ6 389 aa22.68■■□□□ 1.22
SSRP1-204ENST00000529002 ARNTL2Q8WYA1 636 aa22.68■■□□□ 1.22
SSRP1-204ENST00000529002 STRBPQ96SI9 672 aaKnown RBP22.68■■□□□ 1.22
SSRP1-204ENST00000529002 ISY1Q9ULR0 285 aaKnown RBP22.68■■□□□ 1.22
SSRP1-204ENST00000529002 TMEM232C9JQI7 657 aa22.67■■□□□ 1.22
SSRP1-204ENST00000529002 POU3F3P20264 500 aaPredicted RBP22.67■■□□□ 1.22
SSRP1-204ENST00000529002 SBK1Q52WX2 424 aa22.67■■□□□ 1.22
SSRP1-204ENST00000529002 SLFN13Q68D06 897 aa22.67■■□□□ 1.22
SSRP1-204ENST00000529002 COG6Q9Y2V7 657 aa22.67■■□□□ 1.22
SSRP1-204ENST00000529002 ASB14A6NK59 587 aa22.66■■□□□ 1.22
SSRP1-204ENST00000529002 OAZ1P54368 228 aa22.66■■□□□ 1.22
SSRP1-204ENST00000529002 TAP1Q03518 808 aa22.66■■□□□ 1.22
SSRP1-204ENST00000529002 MKL1Q969V6 931 aa22.66■■□□□ 1.22
SSRP1-204ENST00000529002 CD320Q9NPF0 282 aa22.66■■□□□ 1.22
SSRP1-204ENST00000529002 MTMR4Q9NYA4 1195 aa22.66■■□□□ 1.22
SSRP1-204ENST00000529002 TANC1Q9C0D5 1861 aa22.65■■□□□ 1.22
SSRP1-204ENST00000529002 ZEB2O60315 1214 aa22.65■■□□□ 1.22
SSRP1-204ENST00000529002 BMP3P12645 472 aa22.65■■□□□ 1.22
SSRP1-204ENST00000529002 ALAS1P13196 640 aa22.65■■□□□ 1.22
SSRP1-204ENST00000529002 MUM1L1Q5H9M0 696 aa22.65■■□□□ 1.22
SSRP1-204ENST00000529002 TRERF1Q96PN7 1200 aa22.65■■□□□ 1.22
SSRP1-204ENST00000529002 EPB41L4AQ9HCS5 686 aaPredicted RBP22.65■■□□□ 1.22
SSRP1-204ENST00000529002 SCN10AQ9Y5Y9 1956 aa22.65■■□□□ 1.22
SSRP1-204ENST00000529002 TNKSO95271 1327 aa22.64■■□□□ 1.22
SSRP1-204ENST00000529002 GRB10Q13322 594 aa22.64■■□□□ 1.21
SSRP1-204ENST00000529002 IQSEC1Q6DN90 963 aa22.64■■□□□ 1.21
SSRP1-204ENST00000529002 KIAA1211Q6ZU35 1233 aa22.64■■□□□ 1.21
SSRP1-204ENST00000529002 RASGRP2Q7LDG7 609 aa22.64■■□□□ 1.21
SSRP1-204ENST00000529002 COG5Q9UP83 839 aa22.64■■□□□ 1.21
SSRP1-204ENST00000529002 ZNF444Q8N0Y2 327 aaPredicted RBP22.63■■□□□ 1.21
SSRP1-204ENST00000529002 HLA-CQ95604 372 aa22.63■■□□□ 1.21
SSRP1-204ENST00000529002 LPXNO60711 386 aa22.62■■□□□ 1.21
SSRP1-204ENST00000529002 TTLL1O95922 423 aa22.62■■□□□ 1.21
SSRP1-204ENST00000529002 MYL3P08590 195 aa22.62■■□□□ 1.21
SSRP1-204ENST00000529002 TMCO2Q7Z6W1 182 aaPredicted RBP22.62■■□□□ 1.21
SSRP1-204ENST00000529002 GMCL1P1Q8NEA9 526 aa22.62■■□□□ 1.21
SSRP1-204ENST00000529002 OSBP2Q969R2 916 aa22.62■■□□□ 1.21
SSRP1-204ENST00000529002 ARIH1Q9Y4X5 557 aaPredicted RBP22.62■■□□□ 1.21
SSRP1-204ENST00000529002 IKQ13123 557 aaPredicted RBP22.61■■□□□ 1.21
SSRP1-204ENST00000529002 FAM47CQ5HY64 1035 aa22.61■■□□□ 1.21
SSRP1-204ENST00000529002 NSMFQ6X4W1 530 aa22.61■■□□□ 1.21
SSRP1-204ENST00000529002 SEZ6LQ9BYH1 1024 aa22.61■■□□□ 1.21
SSRP1-204ENST00000529002 CYP39A1Q9NYL5 469 aa22.61■■□□□ 1.21
SSRP1-204ENST00000529002 PIEZO1Q92508 2521 aa22.6■■□□□ 1.21
SSRP1-204ENST00000529002 LCHNA4D1U4 455 aa22.6■■□□□ 1.21
SSRP1-204ENST00000529002 SMARCA5O60264 1052 aaPredicted RBP22.6■■□□□ 1.21
SSRP1-204ENST00000529002 GPR37L1O60883 481 aa22.6■■□□□ 1.21
SSRP1-204ENST00000529002 PFKMP08237 780 aa22.6■■□□□ 1.21
SSRP1-204ENST00000529002 MCCP23508 829 aa22.6■■□□□ 1.21
SSRP1-204ENST00000529002 STAT2P52630 851 aa22.6■■□□□ 1.21
SSRP1-204ENST00000529002 PURAQ00577 322 aaKnown RBP22.6■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms