RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 MTIF3Q9H2K0 278 aaKnown RBP10.24□□□□□ -0.77
SSBP3-212ENST00000528930 ZNFX1Q9P2E3 1918 aaKnown RBP10.24□□□□□ -0.77
SSBP3-212ENST00000528930 SEPT4O43236 478 aa10.23□□□□□ -0.77
SSBP3-212ENST00000528930 CTNND1O60716 968 aaKnown RBP10.23□□□□□ -0.77
SSBP3-212ENST00000528930 ACRP10323 421 aa10.23□□□□□ -0.77
SSBP3-212ENST00000528930 CYP7A1P22680 504 aa10.23□□□□□ -0.77
SSBP3-212ENST00000528930 CYP2C19P33261 490 aa10.23□□□□□ -0.77
SSBP3-212ENST00000528930 ERVK-9P63128 1117 aa10.23□□□□□ -0.77
SSBP3-212ENST00000528930 ERVK-24P63145 666 aa10.23□□□□□ -0.77
SSBP3-212ENST00000528930 ZP2Q05996 745 aa10.23□□□□□ -0.77
SSBP3-212ENST00000528930 ZSCAN29Q8IWY8 852 aaPredicted RBP10.23□□□□□ -0.77
SSBP3-212ENST00000528930 BCL11AQ9H165 835 aa10.23□□□□□ -0.77
SSBP3-212ENST00000528930 BOLA2Q9H3K6 86 aa10.23□□□□□ -0.77
SSBP3-212ENST00000528930 RBPJLQ9UBG7 517 aa10.23□□□□□ -0.77
SSBP3-212ENST00000528930 FOCADQ5VW36 1801 aa10.23□□□□□ -0.77
SSBP3-212ENST00000528930 DMXL1Q9Y485 3027 aa10.23□□□□□ -0.77
SSBP3-212ENST00000528930 SIPA1L1O43166 1804 aa10.22□□□□□ -0.77
SSBP3-212ENST00000528930 FAM187AA6NFU0 413 aa10.22□□□□□ -0.77
SSBP3-212ENST00000528930 GOLIM4O00461 696 aa10.22□□□□□ -0.77
SSBP3-212ENST00000528930 LPXNO60711 386 aa10.22□□□□□ -0.77
SSBP3-212ENST00000528930 DGAT1O75907 488 aa10.22□□□□□ -0.77
SSBP3-212ENST00000528930 HERVK_113P62684 666 aa10.22□□□□□ -0.77
SSBP3-212ENST00000528930 TTF1Q15361 905 aaPredicted RBP10.22□□□□□ -0.77
SSBP3-212ENST00000528930 Q3C1V9 767 aa10.22□□□□□ -0.77
SSBP3-212ENST00000528930 HERC4Q5GLZ8 1057 aaPredicted RBP10.22□□□□□ -0.77
SSBP3-212ENST00000528930 SH3D19Q5HYK7 790 aa10.22□□□□□ -0.77
SSBP3-212ENST00000528930 FAM47AQ5JRC9 791 aa10.22□□□□□ -0.77
SSBP3-212ENST00000528930 ANO1Q5XXA6 986 aa10.22□□□□□ -0.77
SSBP3-212ENST00000528930 PTCRAQ6ISU1 281 aaPredicted RBP10.22□□□□□ -0.77
SSBP3-212ENST00000528930 TMED8Q6PL24 325 aaPredicted RBP10.22□□□□□ -0.77
SSBP3-212ENST00000528930 TMEM199Q8N511 208 aa10.22□□□□□ -0.77
SSBP3-212ENST00000528930 TGFBRAP1Q8WUH2 860 aa10.22□□□□□ -0.77
SSBP3-212ENST00000528930 DNAJC2Q99543 621 aaKnown RBP10.22□□□□□ -0.77
SSBP3-212ENST00000528930 HAUS7Q99871 368 aa10.22□□□□□ -0.77
SSBP3-212ENST00000528930 RIOK1Q9BRS2 568 aaKnown RBP10.22□□□□□ -0.77
SSBP3-212ENST00000528930 NOL10Q9BSC4 688 aaKnown RBP10.22□□□□□ -0.77
SSBP3-212ENST00000528930 IL23AQ9NPF7 189 aa10.22□□□□□ -0.77
SSBP3-212ENST00000528930 IGSF5Q9NSI5 407 aa10.22□□□□□ -0.77
SSBP3-212ENST00000528930 ZNF292O60281 2723 aa10.21□□□□□ -0.77
SSBP3-212ENST00000528930 DMDP11532 3685 aa10.21□□□□□ -0.77
SSBP3-212ENST00000528930 A0A1W2PQ45 241 aaPredicted RBP10.21□□□□□ -0.77
SSBP3-212ENST00000528930 A0A1W2PQY0 241 aa10.21□□□□□ -0.77
SSBP3-212ENST00000528930 TCRBV5S4A2TA0A5A2 114 aa10.21□□□□□ -0.77
SSBP3-212ENST00000528930 FAM196BA6NMK8 535 aa10.21□□□□□ -0.77
SSBP3-212ENST00000528930 DCDC2CA8MYV0 355 aa10.21□□□□□ -0.77
SSBP3-212ENST00000528930 PDE6AP16499 860 aa10.21□□□□□ -0.77
SSBP3-212ENST00000528930 HOXA7P31268 230 aaPredicted RBP10.21□□□□□ -0.77
SSBP3-212ENST00000528930 HMGCS2P54868 508 aa10.21□□□□□ -0.77
SSBP3-212ENST00000528930 GRB10Q13322 594 aa10.21□□□□□ -0.77
SSBP3-212ENST00000528930 RRP1BQ14684 758 aaKnown RBP10.21□□□□□ -0.77
SSBP3-212ENST00000528930 SLC9C2Q5TAH2 1124 aa10.21□□□□□ -0.77
SSBP3-212ENST00000528930 METTL16Q86W50 562 aaKnown RBP10.21□□□□□ -0.77
SSBP3-212ENST00000528930 MAPKAPK5Q8IW41 473 aa10.21□□□□□ -0.77
SSBP3-212ENST00000528930 MIGA1Q8NAN2 632 aa10.21□□□□□ -0.77
SSBP3-212ENST00000528930 NPLOC4Q8TAT6 608 aa10.21□□□□□ -0.77
SSBP3-212ENST00000528930 ATOH1Q92858 354 aaPredicted RBP10.21□□□□□ -0.77
SSBP3-212ENST00000528930 PAG1Q9NWQ8 432 aa10.21□□□□□ -0.77
SSBP3-212ENST00000528930 PRKAG3Q9UGI9 489 aa10.21□□□□□ -0.77
SSBP3-212ENST00000528930 FLT1P17948 1338 aa10.21□□□□□ -0.78
SSBP3-212ENST00000528930 SETXQ7Z333 2677 aaKnown RBP10.21□□□□□ -0.78
SSBP3-212ENST00000528930 ANKRD11Q6UB99 2663 aaPredicted RBP10.2□□□□□ -0.78
SSBP3-212ENST00000528930 SLC15A5A6NIM6 579 aa10.2□□□□□ -0.78
SSBP3-212ENST00000528930 ZNF536O15090 1300 aa10.2□□□□□ -0.78
SSBP3-212ENST00000528930 ACTN4O43707 911 aaKnown RBP10.2□□□□□ -0.78
SSBP3-212ENST00000528930 CFHP08603 1231 aa10.2□□□□□ -0.78
SSBP3-212ENST00000528930 IRX3P78415 501 aaPredicted RBP10.2□□□□□ -0.78
SSBP3-212ENST00000528930 ATP2B2Q01814 1243 aa10.2□□□□□ -0.78
SSBP3-212ENST00000528930 SPP2Q13103 211 aa10.2□□□□□ -0.78
SSBP3-212ENST00000528930 PTGDRQ13258 359 aa10.2□□□□□ -0.78
SSBP3-212ENST00000528930 ST3GAL2Q16842 350 aa10.2□□□□□ -0.78
SSBP3-212ENST00000528930 ATG2AQ2TAZ0 1938 aa10.2□□□□□ -0.78
SSBP3-212ENST00000528930 PUS10Q3MIT2 529 aaKnown RBP10.2□□□□□ -0.78
SSBP3-212ENST00000528930 SLFNL1Q499Z3 407 aa10.2□□□□□ -0.78
SSBP3-212ENST00000528930 PLA2G2CQ5R387 149 aa10.2□□□□□ -0.78
SSBP3-212ENST00000528930 DGLUCYQ7Z3D6 616 aa10.2□□□□□ -0.78
SSBP3-212ENST00000528930 CERS3Q8IU89 383 aa10.2□□□□□ -0.78
SSBP3-212ENST00000528930 ZNF280CQ8ND82 737 aa10.2□□□□□ -0.78
SSBP3-212ENST00000528930 ROBO3Q96MS0 1386 aa10.2□□□□□ -0.78
SSBP3-212ENST00000528930 FSD1Q9BTV5 496 aa10.2□□□□□ -0.78
SSBP3-212ENST00000528930 CEP250Q9BV73 2442 aa10.2□□□□□ -0.78
SSBP3-212ENST00000528930 TBC1D2Q9BYX2 928 aa10.2□□□□□ -0.78
SSBP3-212ENST00000528930 DHX36Q9H2U1 1008 aaKnown RBP10.2□□□□□ -0.78
SSBP3-212ENST00000528930 TMEM134Q9H6X4 195 aa10.2□□□□□ -0.78
SSBP3-212ENST00000528930 DNAJC18Q9H819 358 aa10.2□□□□□ -0.78
SSBP3-212ENST00000528930 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.2□□□□□ -0.78
SSBP3-212ENST00000528930 ZNF532Q9HCE3 1301 aa10.2□□□□□ -0.78
SSBP3-212ENST00000528930 ECHDC1Q9NTX5 307 aa10.2□□□□□ -0.78
SSBP3-212ENST00000528930 LMCD1Q9NZU5 365 aa10.2□□□□□ -0.78
SSBP3-212ENST00000528930 PALD1Q9ULE6 856 aa10.2□□□□□ -0.78
SSBP3-212ENST00000528930 SCN5AQ14524 2016 aa10.19□□□□□ -0.78
SSBP3-212ENST00000528930 RCCD1A6NED2 376 aa10.19□□□□□ -0.78
SSBP3-212ENST00000528930 ST8SIA5O15466 376 aa10.19□□□□□ -0.78
SSBP3-212ENST00000528930 GDF9O60383 454 aa10.19□□□□□ -0.78
SSBP3-212ENST00000528930 CHGBP05060 677 aa10.19□□□□□ -0.78
SSBP3-212ENST00000528930 CA3P07451 260 aa10.19□□□□□ -0.78
SSBP3-212ENST00000528930 KCNA5P22460 613 aa10.19□□□□□ -0.78
SSBP3-212ENST00000528930 IRS1P35568 1242 aa10.19□□□□□ -0.78
SSBP3-212ENST00000528930 ADD2P35612 726 aa10.19□□□□□ -0.78
SSBP3-212ENST00000528930 NBL1P41271 181 aa10.19□□□□□ -0.78
SSBP3-212ENST00000528930 HDAC1Q13547 482 aaPredicted RBP10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms