RNA–Protein interactions for RNA: ENST00000528895.5

TM9SF1-207, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 2

Gene TM9SF1, Length 961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-207ENST00000528895 CCL15Q16663 113 aa13.53□□□□□ -0.24
TM9SF1-207ENST00000528895 CSPP1Q1MSJ5 1256 aa13.53□□□□□ -0.24
TM9SF1-207ENST00000528895 USH1GQ495M9 461 aa13.53□□□□□ -0.24
TM9SF1-207ENST00000528895 RASAL3Q86YV0 1011 aa13.53□□□□□ -0.24
TM9SF1-207ENST00000528895 NOSTRINQ8IVI9 506 aa13.53□□□□□ -0.24
TM9SF1-207ENST00000528895 BLIDQ8IZY5 108 aa13.53□□□□□ -0.24
TM9SF1-207ENST00000528895 MB21D1Q8N884 522 aa13.53□□□□□ -0.24
TM9SF1-207ENST00000528895 COA7Q96BR5 231 aa13.53□□□□□ -0.24
TM9SF1-207ENST00000528895 ATG4CQ96DT6 458 aa13.53□□□□□ -0.24
TM9SF1-207ENST00000528895 HHIPL1Q96JK4 782 aa13.53□□□□□ -0.24
TM9SF1-207ENST00000528895 ZNF396Q96N95 335 aaPredicted RBP13.53□□□□□ -0.24
TM9SF1-207ENST00000528895 CCPG1Q9ULG6 757 aa13.53□□□□□ -0.24
TM9SF1-207ENST00000528895 NOL7Q9UMY1 257 aaKnown RBP13.53□□□□□ -0.24
TM9SF1-207ENST00000528895 SLC45A1Q9Y2W3 748 aa13.53□□□□□ -0.24
TM9SF1-207ENST00000528895 MRPL11Q9Y3B7 192 aaKnown RBP13.53□□□□□ -0.24
TM9SF1-207ENST00000528895 CCDC194A0A1B0GVG4 234 aa13.52□□□□□ -0.25
TM9SF1-207ENST00000528895 SPDYE16A6NNV3 312 aaPredicted RBP13.52□□□□□ -0.25
TM9SF1-207ENST00000528895 VWA5AO00534 786 aa13.52□□□□□ -0.25
TM9SF1-207ENST00000528895 SLC10A3P09131 477 aa13.52□□□□□ -0.25
TM9SF1-207ENST00000528895 U2AF2P26368 475 aaKnown RBP eCLIP13.52□□□□□ -0.25
TM9SF1-207ENST00000528895 MRPL12P52815 198 aaKnown RBP13.52□□□□□ -0.25
TM9SF1-207ENST00000528895 KRT85P78386 507 aa13.52□□□□□ -0.25
TM9SF1-207ENST00000528895 MKRN3Q13064 507 aaKnown RBP13.52□□□□□ -0.25
TM9SF1-207ENST00000528895 MCTP2Q6DN12 878 aa13.52□□□□□ -0.25
TM9SF1-207ENST00000528895 CYP4F22Q6NT55 531 aa13.52□□□□□ -0.25
TM9SF1-207ENST00000528895 TYW1BQ6NUM6 668 aa13.52□□□□□ -0.25
TM9SF1-207ENST00000528895 ANKRD23Q86SG2 305 aa13.52□□□□□ -0.25
TM9SF1-207ENST00000528895 REXO1Q8N1G1 1221 aaKnown RBP13.52□□□□□ -0.25
TM9SF1-207ENST00000528895 CCDC102AQ96A19 550 aa13.52□□□□□ -0.25
TM9SF1-207ENST00000528895 CASP8AP2Q9UKL3 1982 aa13.52□□□□□ -0.25
TM9SF1-207ENST00000528895 MYH15Q9Y2K3 1946 aa13.51□□□□□ -0.25
TM9SF1-207ENST00000528895 RBBP6Q7Z6E9 1792 aaKnown RBP13.51□□□□□ -0.25
TM9SF1-207ENST00000528895 MANSC4A6NHS7 340 aaPredicted RBP13.51□□□□□ -0.25
TM9SF1-207ENST00000528895 BTBD18B2RXH4 712 aa13.51□□□□□ -0.25
TM9SF1-207ENST00000528895 KIF28PB7ZC32 967 aa13.51□□□□□ -0.25
TM9SF1-207ENST00000528895 NCLP19338 710 aaKnown RBP13.51□□□□□ -0.25
TM9SF1-207ENST00000528895 MOGSQ13724 837 aa13.51□□□□□ -0.25
TM9SF1-207ENST00000528895 ATL3Q6DD88 541 aa13.51□□□□□ -0.25
TM9SF1-207ENST00000528895 LBX2Q6XYB7 198 aa13.51□□□□□ -0.25
TM9SF1-207ENST00000528895 CLEC17AQ6ZS10 378 aa13.51□□□□□ -0.25
TM9SF1-207ENST00000528895 PAXIP1Q6ZW49 1069 aaPredicted RBP13.51□□□□□ -0.25
TM9SF1-207ENST00000528895 KRT25Q7Z3Z0 450 aa13.51□□□□□ -0.25
TM9SF1-207ENST00000528895 SHISA4Q96DD7 197 aa13.51□□□□□ -0.25
TM9SF1-207ENST00000528895 PSTPIP2Q9H939 334 aa13.51□□□□□ -0.25
TM9SF1-207ENST00000528895 RIC8AQ9NPQ8 531 aa13.51□□□□□ -0.25
TM9SF1-207ENST00000528895 CFAP45Q9UL16 551 aa13.51□□□□□ -0.25
TM9SF1-207ENST00000528895 ADAMTS5Q9UNA0 930 aa13.51□□□□□ -0.25
TM9SF1-207ENST00000528895 BAG4O95429 457 aaKnown RBP13.5□□□□□ -0.25
TM9SF1-207ENST00000528895 COPB2P35606 906 aa13.5□□□□□ -0.25
TM9SF1-207ENST00000528895 HERVK_113P62684 666 aa13.5□□□□□ -0.25
TM9SF1-207ENST00000528895 SREBF2Q12772 1141 aa13.5□□□□□ -0.25
TM9SF1-207ENST00000528895 NR5A1Q13285 461 aa13.5□□□□□ -0.25
TM9SF1-207ENST00000528895 AP3B2Q13367 1082 aa13.5□□□□□ -0.25
TM9SF1-207ENST00000528895 TKFCQ3LXA3 575 aa13.5□□□□□ -0.25
TM9SF1-207ENST00000528895 FOXD4L6Q3SYB3 417 aaPredicted RBP13.5□□□□□ -0.25
TM9SF1-207ENST00000528895 RILPL1Q5EBL4 403 aa13.5□□□□□ -0.25
TM9SF1-207ENST00000528895 MYSM1Q5VVJ2 828 aa13.5□□□□□ -0.25
TM9SF1-207ENST00000528895 FOXD4L3Q6VB84 417 aaPredicted RBP13.5□□□□□ -0.25
TM9SF1-207ENST00000528895 MCF2L2Q86YR7 1114 aa13.5□□□□□ -0.25
TM9SF1-207ENST00000528895 CPXCR1Q8N123 301 aa13.5□□□□□ -0.25
TM9SF1-207ENST00000528895 MS4A4AQ96JQ5 239 aa13.5□□□□□ -0.25
TM9SF1-207ENST00000528895 PARK7Q99497 189 aaKnown RBP13.5□□□□□ -0.25
TM9SF1-207ENST00000528895 BEGAINQ9BUH8 593 aa13.5□□□□□ -0.25
TM9SF1-207ENST00000528895 TEX13BQ9BXU2 312 aa13.5□□□□□ -0.25
TM9SF1-207ENST00000528895 ASCC2Q9H1I8 757 aaPredicted RBP13.5□□□□□ -0.25
TM9SF1-207ENST00000528895 RAVER2Q9HCJ3 691 aaKnown RBP13.5□□□□□ -0.25
TM9SF1-207ENST00000528895 ZNF536O15090 1300 aa13.49□□□□□ -0.25
TM9SF1-207ENST00000528895 PDHXO00330 501 aa13.49□□□□□ -0.25
TM9SF1-207ENST00000528895 ATP2A1O14983 1001 aa13.49□□□□□ -0.25
TM9SF1-207ENST00000528895 PTMSP20962 102 aa13.49□□□□□ -0.25
TM9SF1-207ENST00000528895 TRAPPC10P48553 1259 aa13.49□□□□□ -0.25
TM9SF1-207ENST00000528895 GRM1Q13255 1194 aa13.49□□□□□ -0.25
TM9SF1-207ENST00000528895 NONOQ15233 471 aaKnown RBP eCLIP13.49□□□□□ -0.25
TM9SF1-207ENST00000528895 NPY5RQ15761 445 aa13.49□□□□□ -0.25
TM9SF1-207ENST00000528895 SNRNP48Q6IEG0 339 aaKnown RBP13.49□□□□□ -0.25
TM9SF1-207ENST00000528895 GPAT2Q6NUI2 795 aa13.49□□□□□ -0.25
TM9SF1-207ENST00000528895 SAMD3Q8N6K7 520 aa13.49□□□□□ -0.25
TM9SF1-207ENST00000528895 REPS2Q8NFH8 660 aa13.49□□□□□ -0.25
TM9SF1-207ENST00000528895 OXER1Q8TDS5 423 aa13.49□□□□□ -0.25
TM9SF1-207ENST00000528895 SMCR8Q8TEV9 937 aaPredicted RBP13.49□□□□□ -0.25
TM9SF1-207ENST00000528895 BRI3BPQ8WY22 251 aa13.49□□□□□ -0.25
TM9SF1-207ENST00000528895 AGBL1Q96MI9 1066 aa13.49□□□□□ -0.25
TM9SF1-207ENST00000528895 SCAND2PQ9GZW5 306 aaPredicted RBP13.49□□□□□ -0.25
TM9SF1-207ENST00000528895 EHMT1Q9H9B1 1298 aa13.49□□□□□ -0.25
TM9SF1-207ENST00000528895 ZCCHC17Q9NP64 241 aaKnown RBP13.49□□□□□ -0.25
TM9SF1-207ENST00000528895 PCDHA6Q9UN73 950 aa13.49□□□□□ -0.25
TM9SF1-207ENST00000528895 PCDHA8Q9Y5H6 950 aa13.49□□□□□ -0.25
TM9SF1-207ENST00000528895 RLFQ13129 1914 aa13.49□□□□□ -0.25
TM9SF1-207ENST00000528895 SPDYE3A6NKU9 549 aa13.48□□□□□ -0.25
TM9SF1-207ENST00000528895 DDX11L8A8MPP1 907 aa13.48□□□□□ -0.25
TM9SF1-207ENST00000528895 BTBD19C9JJ37 291 aa13.48□□□□□ -0.25
TM9SF1-207ENST00000528895 GCOM1H8Y6P7 765 aaPredicted RBP13.48□□□□□ -0.25
TM9SF1-207ENST00000528895 PIK3CDO00329 1044 aa13.48□□□□□ -0.25
TM9SF1-207ENST00000528895 POLR2MP0CAP2 368 aa13.48□□□□□ -0.25
TM9SF1-207ENST00000528895 ALAS1P13196 640 aa13.48□□□□□ -0.25
TM9SF1-207ENST00000528895 MAP2K2P36507 400 aa13.48□□□□□ -0.25
TM9SF1-207ENST00000528895 INHBEP58166 350 aa13.48□□□□□ -0.25
TM9SF1-207ENST00000528895 DNM1Q05193 864 aaKnown RBP13.48□□□□□ -0.25
TM9SF1-207ENST00000528895 PLS1Q14651 629 aa13.48□□□□□ -0.25
TM9SF1-207ENST00000528895 PIK3AP1Q6ZUJ8 805 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms