RNA–Protein interactions for RNA: ENST00000528563.5

HIF3A-211, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2

Gene HIF3A, Length 1,486 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-211ENST00000528563 MTMR8Q96EF0 704 aa19.62■□□□□ 0.73
HIF3A-211ENST00000528563 MAP3K14Q99558 947 aa19.62■□□□□ 0.73
HIF3A-211ENST00000528563 DDX20Q9UHI6 824 aaKnown RBP19.62■□□□□ 0.73
HIF3A-211ENST00000528563 SYNGAP1Q96PV0 1343 aa19.61■□□□□ 0.73
HIF3A-211ENST00000528563 SOWAHBA6NEL2 793 aa19.61■□□□□ 0.73
HIF3A-211ENST00000528563 NFIBO00712 420 aa19.61■□□□□ 0.73
HIF3A-211ENST00000528563 SEPT4O43236 478 aa19.61■□□□□ 0.73
HIF3A-211ENST00000528563 EPB41L2O43491 1005 aaKnown RBP19.61■□□□□ 0.73
HIF3A-211ENST00000528563 MSCO60682 206 aa19.61■□□□□ 0.73
HIF3A-211ENST00000528563 FARP2O94887 1054 aaPredicted RBP19.61■□□□□ 0.73
HIF3A-211ENST00000528563 CDC37Q16543 378 aaPredicted RBP19.61■□□□□ 0.73
HIF3A-211ENST00000528563 DHX32Q7L7V1 743 aaKnown RBP19.61■□□□□ 0.73
HIF3A-211ENST00000528563 ZNF654Q8IZM8 581 aa19.61■□□□□ 0.73
HIF3A-211ENST00000528563 RIOX1Q9H6W3 641 aa19.61■□□□□ 0.73
HIF3A-211ENST00000528563 ZNF865P0CJ78 1059 aaPredicted RBP19.6■□□□□ 0.73
HIF3A-211ENST00000528563 BAATQ14032 418 aaPredicted RBP19.6■□□□□ 0.73
HIF3A-211ENST00000528563 QRICH1Q2TAL8 776 aa19.6■□□□□ 0.73
HIF3A-211ENST00000528563 NSMFQ6X4W1 530 aa19.6■□□□□ 0.73
HIF3A-211ENST00000528563 LRRC2Q9BYS8 371 aa19.6■□□□□ 0.73
HIF3A-211ENST00000528563 DHX16O60231 1041 aaKnown RBP19.6■□□□□ 0.73
HIF3A-211ENST00000528563 DDAH1O94760 285 aa19.6■□□□□ 0.73
HIF3A-211ENST00000528563 SGMS1Q86VZ5 419 aa19.6■□□□□ 0.73
HIF3A-211ENST00000528563 RGS22Q8NE09 1264 aa19.6■□□□□ 0.73
HIF3A-211ENST00000528563 USP26Q9BXU7 913 aa19.6■□□□□ 0.73
HIF3A-211ENST00000528563 CNPY2Q9Y2B0 182 aa19.6■□□□□ 0.73
HIF3A-211ENST00000528563 SNX14Q9Y5W7 946 aa19.6■□□□□ 0.73
HIF3A-211ENST00000528563 MKI67P46013 3256 aaKnown RBP19.59■□□□□ 0.73
HIF3A-211ENST00000528563 ASTN1O14525 1302 aa19.59■□□□□ 0.73
HIF3A-211ENST00000528563 CYTH3O43739 400 aa19.59■□□□□ 0.73
HIF3A-211ENST00000528563 HMGB1P09429 215 aaKnown RBP19.59■□□□□ 0.73
HIF3A-211ENST00000528563 USH1GQ495M9 461 aa19.59■□□□□ 0.73
HIF3A-211ENST00000528563 NFXL1Q6ZNB6 911 aa19.59■□□□□ 0.73
HIF3A-211ENST00000528563 FBXO11Q86XK2 927 aa19.59■□□□□ 0.73
HIF3A-211ENST00000528563 DIS3LQ8TF46 1054 aaKnown RBP19.59■□□□□ 0.73
HIF3A-211ENST00000528563 PAWRQ96IZ0 340 aaKnown RBP19.59■□□□□ 0.73
HIF3A-211ENST00000528563 MYL10Q9BUA6 226 aa19.59■□□□□ 0.73
HIF3A-211ENST00000528563 MAF1Q9H063 256 aa19.59■□□□□ 0.73
HIF3A-211ENST00000528563 BAZ2BQ9UIF8 2168 aaKnown RBP19.58■□□□□ 0.73
HIF3A-211ENST00000528563 CEP290O15078 2479 aa19.58■□□□□ 0.72
HIF3A-211ENST00000528563 CCDC69A6NI79 296 aa19.58■□□□□ 0.72
HIF3A-211ENST00000528563 ARMCX2Q7L311 632 aa19.58■□□□□ 0.72
HIF3A-211ENST00000528563 CCDC144CPQ8IYA2 1237 aa19.58■□□□□ 0.72
HIF3A-211ENST00000528563 NUP133Q8WUM0 1156 aa19.58■□□□□ 0.72
HIF3A-211ENST00000528563 PURBQ96QR8 312 aaKnown RBP19.58■□□□□ 0.72
HIF3A-211ENST00000528563 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.58■□□□□ 0.72
HIF3A-211ENST00000528563 ABCB11O95342 1321 aa19.57■□□□□ 0.72
HIF3A-211ENST00000528563 ZBTB5O15062 677 aa19.57■□□□□ 0.72
HIF3A-211ENST00000528563 PPP1R11O60927 126 aaPredicted RBP19.57■□□□□ 0.72
HIF3A-211ENST00000528563 SMARCA1P28370 1054 aa19.57■□□□□ 0.72
HIF3A-211ENST00000528563 RNF207Q6ZRF8 634 aa19.57■□□□□ 0.72
HIF3A-211ENST00000528563 NECAB2Q7Z6G3 386 aa19.57■□□□□ 0.72
HIF3A-211ENST00000528563 TCEANC2Q96MN5 208 aa19.57■□□□□ 0.72
HIF3A-211ENST00000528563 AMNQ9BXJ7 453 aa19.57■□□□□ 0.72
HIF3A-211ENST00000528563 ABHD16BQ9H3Z7 469 aa19.57■□□□□ 0.72
HIF3A-211ENST00000528563 PTPDC1A2A3K4 754 aa19.56■□□□□ 0.72
HIF3A-211ENST00000528563 ASB14A6NK59 587 aa19.56■□□□□ 0.72
HIF3A-211ENST00000528563 CALM1P0DP23 149 aa19.56■□□□□ 0.72
HIF3A-211ENST00000528563 CALM2P0DP24 149 aa19.56■□□□□ 0.72
HIF3A-211ENST00000528563 CALM3P0DP25 149 aa19.56■□□□□ 0.72
HIF3A-211ENST00000528563 KIF5BP33176 963 aa19.56■□□□□ 0.72
HIF3A-211ENST00000528563 RPS6P62753 249 aaKnown RBP19.56■□□□□ 0.72
HIF3A-211ENST00000528563 ACVR2BQ13705 512 aa19.56■□□□□ 0.72
HIF3A-211ENST00000528563 CTCFLQ8NI51 663 aaPredicted RBP19.56■□□□□ 0.72
HIF3A-211ENST00000528563 MORC4Q8TE76 937 aa19.56■□□□□ 0.72
HIF3A-211ENST00000528563 TBC1D5Q92609 795 aa19.56■□□□□ 0.72
HIF3A-211ENST00000528563 PIGSQ96S52 555 aa19.56■□□□□ 0.72
HIF3A-211ENST00000528563 KATNBL1Q9H079 304 aa19.56■□□□□ 0.72
HIF3A-211ENST00000528563 SLC12A7Q9Y666 1083 aa19.56■□□□□ 0.72
HIF3A-211ENST00000528563 COL6A1P12109 1028 aa19.55■□□□□ 0.72
HIF3A-211ENST00000528563 ANO1Q5XXA6 986 aa19.55■□□□□ 0.72
HIF3A-211ENST00000528563 SLC30A10Q6XR72 485 aa19.55■□□□□ 0.72
HIF3A-211ENST00000528563 FANCBQ8NB91 859 aa19.55■□□□□ 0.72
HIF3A-211ENST00000528563 JAKMIP1Q96N16 626 aaKnown RBP19.55■□□□□ 0.72
HIF3A-211ENST00000528563 LZTS2Q9BRK4 669 aa19.55■□□□□ 0.72
HIF3A-211ENST00000528563 SPZ1Q9BXG8 430 aa19.55■□□□□ 0.72
HIF3A-211ENST00000528563 ADD3Q9UEY8 706 aaKnown RBP19.55■□□□□ 0.72
HIF3A-211ENST00000528563 MRPL11Q9Y3B7 192 aaKnown RBP19.55■□□□□ 0.72
HIF3A-211ENST00000528563 MCM3APO60318 1980 aa19.55■□□□□ 0.72
HIF3A-211ENST00000528563 LOC102724159A0A0B4J2E5 919 aa19.54■□□□□ 0.72
HIF3A-211ENST00000528563 PNMA6FA0A0J9YX94 578 aa19.54■□□□□ 0.72
HIF3A-211ENST00000528563 AKR1A1P14550 325 aa19.54■□□□□ 0.72
HIF3A-211ENST00000528563 CPA1P15085 419 aa19.54■□□□□ 0.72
HIF3A-211ENST00000528563 CALML3P27482 149 aa19.54■□□□□ 0.72
HIF3A-211ENST00000528563 GNAQP50148 359 aa19.54■□□□□ 0.72
HIF3A-211ENST00000528563 PWP2Q15269 919 aaKnown RBP19.54■□□□□ 0.72
HIF3A-211ENST00000528563 ARRDC4Q8NCT1 418 aa19.54■□□□□ 0.72
HIF3A-211ENST00000528563 BRPF3Q9ULD4 1205 aa19.54■□□□□ 0.72
HIF3A-211ENST00000528563 FAM184BQ9ULE4 1060 aa19.54■□□□□ 0.72
HIF3A-211ENST00000528563 PCDHA1Q9Y5I3 950 aa19.54■□□□□ 0.72
HIF3A-211ENST00000528563 DDX49Q9Y6V7 483 aaKnown RBP19.54■□□□□ 0.72
HIF3A-211ENST00000528563 OPLAHO14841 1288 aa19.54■□□□□ 0.72
HIF3A-211ENST00000528563 RXRAP19793 462 aa19.54■□□□□ 0.72
HIF3A-211ENST00000528563 CCDC144BQ3MJ40 725 aa19.54■□□□□ 0.72
HIF3A-211ENST00000528563 APOA5Q6Q788 366 aa19.54■□□□□ 0.72
HIF3A-211ENST00000528563 MCF2L2Q86YR7 1114 aa19.54■□□□□ 0.72
HIF3A-211ENST00000528563 SRBD1Q8N5C6 995 aaKnown RBP19.54■□□□□ 0.72
HIF3A-211ENST00000528563 HTATIP2Q9BUP3 242 aa19.54■□□□□ 0.72
HIF3A-211ENST00000528563 LCTP09848 1927 aa19.53■□□□□ 0.72
HIF3A-211ENST00000528563 MYH6P13533 1939 aa19.53■□□□□ 0.72
HIF3A-211ENST00000528563 RARBP10826 455 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms