RNA–Protein interactions for RNA: ENST00000528429.5

SOX6-211, Transcript of SRY-box 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SOX6, Length 2,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-211ENST00000528429 TMEM260Q9NX78 707 aa8.76□□□□□ -1.01
SOX6-211ENST00000528429 SRPRBQ9Y5M8 271 aaKnown RBP8.76□□□□□ -1.01
SOX6-211ENST00000528429 COL2A1P02458 1487 aaPredicted RBP8.76□□□□□ -1.01
SOX6-211ENST00000528429 GOLGA6CA6NDK9 693 aa8.75□□□□□ -1.01
SOX6-211ENST00000528429 GOLGA6BA6NDN3 693 aa8.75□□□□□ -1.01
SOX6-211ENST00000528429 ESPNB1AK53 854 aa8.75□□□□□ -1.01
SOX6-211ENST00000528429 POLR2DO15514 142 aaKnown RBP8.75□□□□□ -1.01
SOX6-211ENST00000528429 BMP15O95972 392 aa8.75□□□□□ -1.01
SOX6-211ENST00000528429 GOLGA6DP0CG33 693 aa8.75□□□□□ -1.01
SOX6-211ENST00000528429 TRAPPC10P48553 1259 aa8.75□□□□□ -1.01
SOX6-211ENST00000528429 ADCY7P51828 1080 aa8.75□□□□□ -1.01
SOX6-211ENST00000528429 UBE2SQ16763 222 aa8.75□□□□□ -1.01
SOX6-211ENST00000528429 QRICH1Q2TAL8 776 aa8.75□□□□□ -1.01
SOX6-211ENST00000528429 LETM2Q2VYF4 491 aa8.75□□□□□ -1.01
SOX6-211ENST00000528429 ISM2Q6H9L7 571 aa8.75□□□□□ -1.01
SOX6-211ENST00000528429 LUZP1Q86V48 1076 aa8.75□□□□□ -1.01
SOX6-211ENST00000528429 CNNM3Q8NE01 707 aa8.75□□□□□ -1.01
SOX6-211ENST00000528429 EPSTI1Q96J88 318 aa8.75□□□□□ -1.01
SOX6-211ENST00000528429 FEZ1Q99689 392 aa8.75□□□□□ -1.01
SOX6-211ENST00000528429 DEFB129Q9H1M3 183 aa8.75□□□□□ -1.01
SOX6-211ENST00000528429 GOLGA6AQ9NYA3 693 aa8.75□□□□□ -1.01
SOX6-211ENST00000528429 CGNQ9P2M7 1197 aaKnown RBP8.75□□□□□ -1.01
SOX6-211ENST00000528429 USP25Q9UHP3 1055 aa8.75□□□□□ -1.01
SOX6-211ENST00000528429 HPSEQ9Y251 543 aa8.75□□□□□ -1.01
SOX6-211ENST00000528429 BMP3P12645 472 aa8.75□□□□□ -1.01
SOX6-211ENST00000528429 CAP2P40123 477 aa8.75□□□□□ -1.01
SOX6-211ENST00000528429 NONOQ15233 471 aaKnown RBP eCLIP8.75□□□□□ -1.01
SOX6-211ENST00000528429 CDC37Q16543 378 aaPredicted RBP8.75□□□□□ -1.01
SOX6-211ENST00000528429 USH1GQ495M9 461 aa8.75□□□□□ -1.01
SOX6-211ENST00000528429 LONRF3Q496Y0 759 aa8.75□□□□□ -1.01
SOX6-211ENST00000528429 CT47A1Q5JQC4 288 aaPredicted RBP8.75□□□□□ -1.01
SOX6-211ENST00000528429 ANGEL2Q5VTE6 544 aaKnown RBP8.75□□□□□ -1.01
SOX6-211ENST00000528429 KRT25Q7Z3Z0 450 aa8.75□□□□□ -1.01
SOX6-211ENST00000528429 DAGLBQ8NCG7 672 aa8.75□□□□□ -1.01
SOX6-211ENST00000528429 TRPM4Q8TD43 1214 aa8.75□□□□□ -1.01
SOX6-211ENST00000528429 GLIS2Q9BZE0 524 aaPredicted RBP8.75□□□□□ -1.01
SOX6-211ENST00000528429 PCDHA1Q9Y5I3 950 aa8.75□□□□□ -1.01
SOX6-211ENST00000528429 M0R2N6 131 aa8.74□□□□□ -1.01
SOX6-211ENST00000528429 CCNT1O60563 726 aaKnown RBP8.74□□□□□ -1.01
SOX6-211ENST00000528429 TAL1P17542 331 aaPredicted RBP8.74□□□□□ -1.01
SOX6-211ENST00000528429 ZNF165P49910 485 aa8.74□□□□□ -1.01
SOX6-211ENST00000528429 ATP2C1P98194 919 aaPredicted RBP8.74□□□□□ -1.01
SOX6-211ENST00000528429 TMCO4Q5TGY1 634 aa8.74□□□□□ -1.01
SOX6-211ENST00000528429 GET4Q7L5D6 327 aaPredicted RBP8.74□□□□□ -1.01
SOX6-211ENST00000528429 GMCL1P1Q8NEA9 526 aa8.74□□□□□ -1.01
SOX6-211ENST00000528429 FAM200AQ8TCP9 573 aa8.74□□□□□ -1.01
SOX6-211ENST00000528429 TBCKQ8TEA7 893 aa8.74□□□□□ -1.01
SOX6-211ENST00000528429 SYMPKQ92797 1274 aaKnown RBP8.74□□□□□ -1.01
SOX6-211ENST00000528429 CALR3Q96L12 384 aaKnown RBP8.74□□□□□ -1.01
SOX6-211ENST00000528429 SYT17Q9BSW7 474 aa8.74□□□□□ -1.01
SOX6-211ENST00000528429 GPBP1L1Q9HC44 474 aaPredicted RBP8.74□□□□□ -1.01
SOX6-211ENST00000528429 RNF181Q9P0P0 153 aa8.74□□□□□ -1.01
SOX6-211ENST00000528429 MYH4Q9Y623 1939 aa8.74□□□□□ -1.01
SOX6-211ENST00000528429 ASNSP08243 561 aa8.74□□□□□ -1.01
SOX6-211ENST00000528429 CDC25AP30304 524 aa8.74□□□□□ -1.01
SOX6-211ENST00000528429 EPS15P42566 896 aa8.74□□□□□ -1.01
SOX6-211ENST00000528429 PNOCQ13519 176 aa8.74□□□□□ -1.01
SOX6-211ENST00000528429 STX1AQ16623 288 aa8.74□□□□□ -1.01
SOX6-211ENST00000528429 KIAA1755Q5JYT7 1200 aa8.74□□□□□ -1.01
SOX6-211ENST00000528429 FAM83BQ5T0W9 1011 aa8.74□□□□□ -1.01
SOX6-211ENST00000528429 NBPF12Q5TAG4 269 aaPredicted RBP8.74□□□□□ -1.01
SOX6-211ENST00000528429 SYDE2Q5VT97 1194 aa8.74□□□□□ -1.01
SOX6-211ENST00000528429 C11orf57Q6ZUT1 292 aaPredicted RBP8.74□□□□□ -1.01
SOX6-211ENST00000528429 FERMT2Q96AC1 680 aa8.74□□□□□ -1.01
SOX6-211ENST00000528429 DHX58Q96C10 678 aa8.74□□□□□ -1.01
SOX6-211ENST00000528429 GMCL1Q96IK5 515 aa8.74□□□□□ -1.01
SOX6-211ENST00000528429 TSPAN18Q96SJ8 248 aa8.74□□□□□ -1.01
SOX6-211ENST00000528429 GOPCQ9HD26 462 aa8.74□□□□□ -1.01
SOX6-211ENST00000528429 KIAA1468Q9P260 1216 aa8.74□□□□□ -1.01
SOX6-211ENST00000528429 FZD1Q9UP38 647 aa8.74□□□□□ -1.01
SOX6-211ENST00000528429 TESPA1A2RU30 521 aaPredicted RBP8.73□□□□□ -1.01
SOX6-211ENST00000528429 hCG_1984214I3L0E3 225 aa8.73□□□□□ -1.01
SOX6-211ENST00000528429 FOXN1O15353 648 aa8.73□□□□□ -1.01
SOX6-211ENST00000528429 TBC1D12O60347 775 aa8.73□□□□□ -1.01
SOX6-211ENST00000528429 DDNO94850 711 aaPredicted RBP8.73□□□□□ -1.01
SOX6-211ENST00000528429 CCDC173Q0VFZ6 552 aa8.73□□□□□ -1.01
SOX6-211ENST00000528429 KRBA2Q6ZNG9 492 aa8.73□□□□□ -1.01
SOX6-211ENST00000528429 NEK8Q86SG6 692 aa8.73□□□□□ -1.01
SOX6-211ENST00000528429 GRAMD1CQ8IYS0 662 aa8.73□□□□□ -1.01
SOX6-211ENST00000528429 ZNF713Q8N859 430 aaPredicted RBP8.73□□□□□ -1.01
SOX6-211ENST00000528429 CUL5Q93034 780 aa8.73□□□□□ -1.01
SOX6-211ENST00000528429 TEPSINQ96N21 525 aa8.73□□□□□ -1.01
SOX6-211ENST00000528429 ZNF341Q9BYN7 854 aa8.73□□□□□ -1.01
SOX6-211ENST00000528429 TMEM60Q9H2L4 133 aa8.73□□□□□ -1.01
SOX6-211ENST00000528429 PSTPIP2Q9H939 334 aa8.73□□□□□ -1.01
SOX6-211ENST00000528429 CBX8Q9HC52 389 aa8.73□□□□□ -1.01
SOX6-211ENST00000528429 GGA3Q9NZ52 723 aa8.73□□□□□ -1.01
SOX6-211ENST00000528429 GPRC5DQ9NZD1 345 aa8.73□□□□□ -1.01
SOX6-211ENST00000528429 SERTAD1Q9UHV2 236 aa8.73□□□□□ -1.01
SOX6-211ENST00000528429 ESYT2A0FGR8 921 aa8.73□□□□□ -1.01
SOX6-211ENST00000528429 USP17L15C9J2P7 530 aa8.73□□□□□ -1.01
SOX6-211ENST00000528429 USP17L13C9JLJ4 530 aa8.73□□□□□ -1.01
SOX6-211ENST00000528429 USP17L11C9JVI0 530 aa8.73□□□□□ -1.01
SOX6-211ENST00000528429 USP17L18D6R9N7 530 aa8.73□□□□□ -1.01
SOX6-211ENST00000528429 USP17L22D6RA61 530 aa8.73□□□□□ -1.01
SOX6-211ENST00000528429 USP17L17D6RBQ6 530 aa8.73□□□□□ -1.01
SOX6-211ENST00000528429 USP17L19D6RCP7 530 aa8.73□□□□□ -1.01
SOX6-211ENST00000528429 USP17L20D6RJB6 530 aa8.73□□□□□ -1.01
SOX6-211ENST00000528429 STAT2P52630 851 aa8.73□□□□□ -1.01
SOX6-211ENST00000528429 USP17L24Q0WX57 530 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms