RNA–Protein interactions for RNA: ENST00000527962.5

CTTN-212, Transcript of cortactin, humanhuman

TSL 2

Gene CTTN, Length 587 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-212ENST00000527962 C16orf59Q7L2K0 433 aa18.64■□□□□ 0.57
CTTN-212ENST00000527962 PBX4Q9BYU1 374 aa18.64■□□□□ 0.57
CTTN-212ENST00000527962 KATNBL1Q9H079 304 aa18.64■□□□□ 0.57
CTTN-212ENST00000527962 HIPK3Q9H422 1215 aa18.64■□□□□ 0.57
CTTN-212ENST00000527962 ADD3Q9UEY8 706 aaKnown RBP18.64■□□□□ 0.57
CTTN-212ENST00000527962 SOWAHBA6NEL2 793 aa18.63■□□□□ 0.57
CTTN-212ENST00000527962 CD4P01730 458 aa18.63■□□□□ 0.57
CTTN-212ENST00000527962 ACRP10323 421 aa18.63■□□□□ 0.57
CTTN-212ENST00000527962 IRX5P78411 483 aaPredicted RBP18.63■□□□□ 0.57
CTTN-212ENST00000527962 RPUSD2Q8IZ73 545 aaKnown RBP18.63■□□□□ 0.57
CTTN-212ENST00000527962 SEC62Q99442 399 aaKnown RBP18.63■□□□□ 0.57
CTTN-212ENST00000527962 VTA1Q9NP79 307 aa18.63■□□□□ 0.57
CTTN-212ENST00000527962 PNMA2Q9UL42 364 aa18.63■□□□□ 0.57
CTTN-212ENST00000527962 CCPG1Q9ULG6 757 aa18.63■□□□□ 0.57
CTTN-212ENST00000527962 GNEQ9Y223 722 aaKnown RBP18.63■□□□□ 0.57
CTTN-212ENST00000527962 ZNF536O15090 1300 aa18.63■□□□□ 0.57
CTTN-212ENST00000527962 TTC28Q96AY4 2481 aa18.62■□□□□ 0.57
CTTN-212ENST00000527962 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.62■□□□□ 0.57
CTTN-212ENST00000527962 CTAGE5O15320 804 aa18.62■□□□□ 0.57
CTTN-212ENST00000527962 RANBP6O60518 1105 aaKnown RBP18.62■□□□□ 0.57
CTTN-212ENST00000527962 CYP2C18P33260 490 aa18.62■□□□□ 0.57
CTTN-212ENST00000527962 AKNAD1Q5T1N1 836 aa18.62■□□□□ 0.57
CTTN-212ENST00000527962 NSMFQ6X4W1 530 aa18.62■□□□□ 0.57
CTTN-212ENST00000527962 KCTD1Q719H9 257 aa18.62■□□□□ 0.57
CTTN-212ENST00000527962 SLC43A3Q8NBI5 491 aa18.62■□□□□ 0.57
CTTN-212ENST00000527962 HERVK_113Q902F9 699 aa18.62■□□□□ 0.57
CTTN-212ENST00000527962 MPHOSPH6Q99547 160 aaKnown RBP18.62■□□□□ 0.57
CTTN-212ENST00000527962 SLC28A3Q9HAS3 691 aa18.62■□□□□ 0.57
CTTN-212ENST00000527962 CYP39A1Q9NYL5 469 aa18.62■□□□□ 0.57
CTTN-212ENST00000527962 PRR12Q9ULL5 1215 aa18.62■□□□□ 0.57
CTTN-212ENST00000527962 LOC102724159A0A0B4J2E5 919 aa18.61■□□□□ 0.57
CTTN-212ENST00000527962 SUPT20HL2P0C7V6 817 aa18.61■□□□□ 0.57
CTTN-212ENST00000527962 SMPD1P17405 629 aa18.61■□□□□ 0.57
CTTN-212ENST00000527962 MX1P20591 662 aa18.61■□□□□ 0.57
CTTN-212ENST00000527962 PWP2Q15269 919 aaKnown RBP18.61■□□□□ 0.57
CTTN-212ENST00000527962 CCDC96Q2M329 555 aa18.61■□□□□ 0.57
CTTN-212ENST00000527962 BRDTQ58F21 947 aaPredicted RBP18.61■□□□□ 0.57
CTTN-212ENST00000527962 KIAA1211Q6ZU35 1233 aa18.61■□□□□ 0.57
CTTN-212ENST00000527962 PI4K2BQ8TCG2 481 aa18.61■□□□□ 0.57
CTTN-212ENST00000527962 DCAF4Q8WV16 495 aa18.61■□□□□ 0.57
CTTN-212ENST00000527962 CHMP4CQ96CF2 233 aa18.61■□□□□ 0.57
CTTN-212ENST00000527962 PRDM6Q9NQX0 595 aa18.61■□□□□ 0.57
CTTN-212ENST00000527962 VCANP13611 3396 aa18.6■□□□□ 0.57
CTTN-212ENST00000527962 GRXCR1A8MXD5 290 aa18.6■□□□□ 0.57
CTTN-212ENST00000527962 ICAM1P05362 532 aa18.6■□□□□ 0.57
CTTN-212ENST00000527962 EEPD1Q7L9B9 569 aa18.6■□□□□ 0.57
CTTN-212ENST00000527962 ATXN2LQ8WWM7 1075 aaKnown RBP18.6■□□□□ 0.57
CTTN-212ENST00000527962 PRDM12Q9H4Q4 367 aa18.6■□□□□ 0.57
CTTN-212ENST00000527962 GPHNQ9NQX3 736 aaPredicted RBP18.6■□□□□ 0.57
CTTN-212ENST00000527962 TOMM22Q9NS69 142 aa18.6■□□□□ 0.57
CTTN-212ENST00000527962 POLR3EQ9NVU0 708 aa18.6■□□□□ 0.57
CTTN-212ENST00000527962 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.6■□□□□ 0.57
CTTN-212ENST00000527962 PBX2P40425 430 aa18.59■□□□□ 0.57
CTTN-212ENST00000527962 CTDSPL2Q05D32 466 aa18.59■□□□□ 0.57
CTTN-212ENST00000527962 IL27Q8NEV9 243 aa18.59■□□□□ 0.57
CTTN-212ENST00000527962 PPM1EQ8WY54 764 aa18.59■□□□□ 0.57
CTTN-212ENST00000527962 TSPYL2Q9H2G4 693 aaPredicted RBP18.59■□□□□ 0.57
CTTN-212ENST00000527962 IL17RBQ9NRM6 502 aa18.59■□□□□ 0.57
CTTN-212ENST00000527962 ANAPC4Q9UJX5 808 aa18.59■□□□□ 0.57
CTTN-212ENST00000527962 MTMR7Q9Y216 660 aa18.59■□□□□ 0.57
CTTN-212ENST00000527962 EYSQ5T1H1 3165 aa18.58■□□□□ 0.57
CTTN-212ENST00000527962 CDH23Q9H251 3354 aa18.58■□□□□ 0.57
CTTN-212ENST00000527962 ASTN1O14525 1302 aa18.58■□□□□ 0.57
CTTN-212ENST00000527962 RAD50Q92878 1312 aa18.58■□□□□ 0.57
CTTN-212ENST00000527962 B4DLN1 442 aa18.58■□□□□ 0.56
CTTN-212ENST00000527962 ORC4O43929 436 aa18.58■□□□□ 0.56
CTTN-212ENST00000527962 CPT1AP50416 773 aa18.58■□□□□ 0.56
CTTN-212ENST00000527962 MRPL12P52815 198 aaKnown RBP18.58■□□□□ 0.56
CTTN-212ENST00000527962 DUSP28Q4G0W2 176 aa18.58■□□□□ 0.56
CTTN-212ENST00000527962 MUM1L1Q5H9M0 696 aa18.58■□□□□ 0.56
CTTN-212ENST00000527962 TAPT1Q6NXT6 567 aa18.58■□□□□ 0.56
CTTN-212ENST00000527962 OTOP2Q7RTS6 562 aa18.58■□□□□ 0.56
CTTN-212ENST00000527962 FBXO16Q8IX29 292 aaPredicted RBP18.58■□□□□ 0.56
CTTN-212ENST00000527962 EVI5LQ96CN4 794 aa18.58■□□□□ 0.56
CTTN-212ENST00000527962 PDGFCQ9NRA1 345 aa18.58■□□□□ 0.56
CTTN-212ENST00000527962 SLC4A7Q9Y6M7 1214 aa18.58■□□□□ 0.56
CTTN-212ENST00000527962 PRUNE2Q8WUY3 3088 aa18.58■□□□□ 0.56
CTTN-212ENST00000527962 MYH4Q9Y623 1939 aa18.57■□□□□ 0.56
CTTN-212ENST00000527962 PTPDC1A2A3K4 754 aa18.57■□□□□ 0.56
CTTN-212ENST00000527962 TNFRSF10AO00220 468 aa18.57■□□□□ 0.56
CTTN-212ENST00000527962 NMT2O60551 498 aa18.57■□□□□ 0.56
CTTN-212ENST00000527962 PFKMP08237 780 aa18.57■□□□□ 0.56
CTTN-212ENST00000527962 TOP1P11387 765 aaKnown RBP18.57■□□□□ 0.56
CTTN-212ENST00000527962 IGFBP4P22692 258 aa18.57■□□□□ 0.56
CTTN-212ENST00000527962 CCL23P55773 120 aa18.57■□□□□ 0.56
CTTN-212ENST00000527962 SNAP25P60880 206 aa18.57■□□□□ 0.56
CTTN-212ENST00000527962 TICAM2Q86XR7 235 aa18.57■□□□□ 0.56
CTTN-212ENST00000527962 USP38Q8NB14 1042 aa18.57■□□□□ 0.56
CTTN-212ENST00000527962 MORC4Q8TE76 937 aa18.57■□□□□ 0.56
CTTN-212ENST00000527962 NOC4LQ9BVI4 516 aaKnown RBP18.57■□□□□ 0.56
CTTN-212ENST00000527962 TRPV6Q9H1D0 765 aa18.57■□□□□ 0.56
CTTN-212ENST00000527962 RANBP17Q9H2T7 1088 aaKnown RBP18.57■□□□□ 0.56
CTTN-212ENST00000527962 HELLSQ9NRZ9 838 aa18.57■□□□□ 0.56
CTTN-212ENST00000527962 THEGQ9P2T0 379 aa18.57■□□□□ 0.56
CTTN-212ENST00000527962 B4GALT4O60513 344 aa18.56■□□□□ 0.56
CTTN-212ENST00000527962 BAATQ14032 418 aaPredicted RBP18.56■□□□□ 0.56
CTTN-212ENST00000527962 ALX1Q15699 326 aa18.56■□□□□ 0.56
CTTN-212ENST00000527962 SYDE2Q5VT97 1194 aa18.56■□□□□ 0.56
CTTN-212ENST00000527962 BTNL9Q6UXG8 535 aa18.56■□□□□ 0.56
CTTN-212ENST00000527962 WDR11Q9BZH6 1224 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms