RNA–Protein interactions for RNA: ENST00000527881.1

TSKU-203, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSKU, Length 3,554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-203ENST00000527881 FAM167BQ9BTA0 163 aa13.83□□□□□ -0.2
TSKU-203ENST00000527881 EXOC1Q9NV70 894 aa13.83□□□□□ -0.2
TSKU-203ENST00000527881 NOVA2Q9UNW9 492 aaKnown RBP13.83□□□□□ -0.2
TSKU-203ENST00000527881 PCDHA13Q9Y5I0 950 aa13.83□□□□□ -0.2
TSKU-203ENST00000527881 CTDSPL2Q05D32 466 aa13.83□□□□□ -0.2
TSKU-203ENST00000527881 TDRD12Q587J7 1177 aaKnown RBP13.83□□□□□ -0.2
TSKU-203ENST00000527881 C6orf89Q6UWU4 347 aa13.83□□□□□ -0.2
TSKU-203ENST00000527881 ANKS4BQ8N8V4 417 aa13.83□□□□□ -0.2
TSKU-203ENST00000527881 CCDC47Q96A33 483 aaKnown RBP13.83□□□□□ -0.2
TSKU-203ENST00000527881 PLIN2Q99541 437 aa13.83□□□□□ -0.2
TSKU-203ENST00000527881 PAGR1Q9BTK6 254 aa13.83□□□□□ -0.2
TSKU-203ENST00000527881 A2ML1A8K2U0 1454 aa13.82□□□□□ -0.2
TSKU-203ENST00000527881 DEXIO95424 95 aa13.82□□□□□ -0.2
TSKU-203ENST00000527881 RPN1P04843 607 aaKnown RBP13.82□□□□□ -0.2
TSKU-203ENST00000527881 ELF3P78545 371 aaPredicted RBP13.82□□□□□ -0.2
TSKU-203ENST00000527881 ATG9AQ7Z3C6 839 aa13.82□□□□□ -0.2
TSKU-203ENST00000527881 CSGALNACT2Q8N6G5 542 aa13.82□□□□□ -0.2
TSKU-203ENST00000527881 RUBCNQ92622 972 aa13.82□□□□□ -0.2
TSKU-203ENST00000527881 TUBGCP2Q9BSJ2 902 aa13.82□□□□□ -0.2
TSKU-203ENST00000527881 BATF3Q9NR55 127 aa13.82□□□□□ -0.2
TSKU-203ENST00000527881 FAM207AQ9NSI2 230 aaPredicted RBP13.82□□□□□ -0.2
TSKU-203ENST00000527881 EYA2O00167 538 aa13.82□□□□□ -0.2
TSKU-203ENST00000527881 PSMA7O14818 248 aa13.82□□□□□ -0.2
TSKU-203ENST00000527881 IFNAR1P17181 557 aa13.82□□□□□ -0.2
TSKU-203ENST00000527881 ZBED6P86452 979 aa13.82□□□□□ -0.2
TSKU-203ENST00000527881 GRIK3Q13003 919 aa13.82□□□□□ -0.2
TSKU-203ENST00000527881 SCARF1Q14162 830 aa13.82□□□□□ -0.2
TSKU-203ENST00000527881 PDIA6Q15084 440 aa13.82□□□□□ -0.2
TSKU-203ENST00000527881 TRADDQ15628 312 aa13.82□□□□□ -0.2
TSKU-203ENST00000527881 CCDC178Q5BJE1 867 aa13.82□□□□□ -0.2
TSKU-203ENST00000527881 LY9Q9HBG7 655 aa13.82□□□□□ -0.2
TSKU-203ENST00000527881 FAM217BQ9NTX9 383 aaPredicted RBP13.82□□□□□ -0.2
TSKU-203ENST00000527881 ETAA1Q9NY74 926 aa13.82□□□□□ -0.2
TSKU-203ENST00000527881 GGA2Q9UJY4 613 aa13.82□□□□□ -0.2
TSKU-203ENST00000527881 TBC1D2BQ9UPU7 963 aa13.82□□□□□ -0.2
TSKU-203ENST00000527881 TRPC6Q9Y210 931 aa13.82□□□□□ -0.2
TSKU-203ENST00000527881 DIAPH2O60879 1101 aa13.82□□□□□ -0.2
TSKU-203ENST00000527881 PRDM1O75626 825 aa13.82□□□□□ -0.2
TSKU-203ENST00000527881 ENOX2Q16206 610 aaKnown RBP13.82□□□□□ -0.2
TSKU-203ENST00000527881 C11orf91Q3C1V1 193 aa13.82□□□□□ -0.2
TSKU-203ENST00000527881 ZNF658Q5TYW1 1059 aaPredicted RBP13.82□□□□□ -0.2
TSKU-203ENST00000527881 TLDC1Q6P9B6 456 aa13.82□□□□□ -0.2
TSKU-203ENST00000527881 MMRN2Q9H8L6 949 aa13.82□□□□□ -0.2
TSKU-203ENST00000527881 XDHP47989 1333 aa13.81□□□□□ -0.2
TSKU-203ENST00000527881 STAT6P42226 847 aa13.81□□□□□ -0.2
TSKU-203ENST00000527881 KCTD19Q17RG1 926 aaPredicted RBP13.81□□□□□ -0.2
TSKU-203ENST00000527881 KRT71Q3SY84 523 aa13.81□□□□□ -0.2
TSKU-203ENST00000527881 NAPBQ9H115 298 aa13.81□□□□□ -0.2
TSKU-203ENST00000527881 EIF4A3P38919 411 aaKnown RBP13.81□□□□□ -0.2
TSKU-203ENST00000527881 RASSF7Q02833 373 aa13.81□□□□□ -0.2
TSKU-203ENST00000527881 ADCY2Q08462 1091 aa13.81□□□□□ -0.2
TSKU-203ENST00000527881 PTGDRQ13258 359 aa13.81□□□□□ -0.2
TSKU-203ENST00000527881 WTAPQ15007 396 aa13.81□□□□□ -0.2
TSKU-203ENST00000527881 RUFY4Q6ZNE9 571 aa13.81□□□□□ -0.2
TSKU-203ENST00000527881 BZW1Q7L1Q6 419 aaKnown RBP13.81□□□□□ -0.2
TSKU-203ENST00000527881 TTC5Q8N0Z6 440 aa13.81□□□□□ -0.2
TSKU-203ENST00000527881 CASKIN2Q8WXE0 1202 aa13.81□□□□□ -0.2
TSKU-203ENST00000527881 FERMT2Q96AC1 680 aa13.81□□□□□ -0.2
TSKU-203ENST00000527881 NOC4LQ9BVI4 516 aaKnown RBP13.81□□□□□ -0.2
TSKU-203ENST00000527881 SH2D4AQ9H788 454 aa13.81□□□□□ -0.2
TSKU-203ENST00000527881 ZBTB12Q9Y330 459 aaPredicted RBP13.81□□□□□ -0.2
TSKU-203ENST00000527881 LRRC37A3O60309 1634 aa13.81□□□□□ -0.2
TSKU-203ENST00000527881 WDR17Q8IZU2 1322 aa13.81□□□□□ -0.2
TSKU-203ENST00000527881 GTPBP6O43824 516 aaPredicted RBP13.81□□□□□ -0.2
TSKU-203ENST00000527881 FTCDO95954 541 aa13.81□□□□□ -0.2
TSKU-203ENST00000527881 MCM7P33993 719 aa13.81□□□□□ -0.2
TSKU-203ENST00000527881 KIF11P52732 1056 aa13.81□□□□□ -0.2
TSKU-203ENST00000527881 SNX1Q13596 522 aa13.81□□□□□ -0.2
TSKU-203ENST00000527881 RABL6Q3YEC7 729 aaPredicted RBP13.81□□□□□ -0.2
TSKU-203ENST00000527881 AMOTQ4VCS5 1084 aa13.81□□□□□ -0.2
TSKU-203ENST00000527881 THEMIS2Q5TEJ8 643 aa13.81□□□□□ -0.2
TSKU-203ENST00000527881 CCDC197Q8NCU1 140 aa13.81□□□□□ -0.2
TSKU-203ENST00000527881 MAGEC3Q8TD91 643 aa13.81□□□□□ -0.2
TSKU-203ENST00000527881 WHAMMQ8TF30 809 aa13.81□□□□□ -0.2
TSKU-203ENST00000527881 RAPGEF5Q92565 580 aa13.81□□□□□ -0.2
TSKU-203ENST00000527881 NOX5Q96PH1 765 aa13.81□□□□□ -0.2
TSKU-203ENST00000527881 SELENOSQ9BQE4 189 aa13.81□□□□□ -0.2
TSKU-203ENST00000527881 NUP58Q9BVL2 599 aa13.81□□□□□ -0.2
TSKU-203ENST00000527881 ZSWIM5Q9P217 1185 aa13.81□□□□□ -0.2
TSKU-203ENST00000527881 ZNF330Q9Y3S2 320 aaPredicted RBP13.81□□□□□ -0.2
TSKU-203ENST00000527881 AKAP12Q02952 1782 aa13.8□□□□□ -0.2
TSKU-203ENST00000527881 KLHL33A6NCF5 533 aa13.8□□□□□ -0.2
TSKU-203ENST00000527881 TRAPPC3O43617 180 aa13.8□□□□□ -0.2
TSKU-203ENST00000527881 MYBL1P10243 752 aa13.8□□□□□ -0.2
TSKU-203ENST00000527881 SAMD1Q6SPF0 538 aaPredicted RBP13.8□□□□□ -0.2
TSKU-203ENST00000527881 IGDCC4Q8TDY8 1250 aa13.8□□□□□ -0.2
TSKU-203ENST00000527881 NOP53Q9NZM5 478 aaKnown RBP13.8□□□□□ -0.2
TSKU-203ENST00000527881 C15orf41Q9Y2V0 281 aa13.8□□□□□ -0.2
TSKU-203ENST00000527881 WDR19Q8NEZ3 1342 aa13.8□□□□□ -0.2
TSKU-203ENST00000527881 A0A1W2PQC6 194 aa13.8□□□□□ -0.2
TSKU-203ENST00000527881 CTNND1O60716 968 aaKnown RBP13.8□□□□□ -0.2
TSKU-203ENST00000527881 KRT2P35908 639 aa13.8□□□□□ -0.2
TSKU-203ENST00000527881 RWDD2BP57060 319 aa13.8□□□□□ -0.2
TSKU-203ENST00000527881 MAGOHP61326 146 aaKnown RBP13.8□□□□□ -0.2
TSKU-203ENST00000527881 XRCC4Q13426 336 aa13.8□□□□□ -0.2
TSKU-203ENST00000527881 GNPTABQ3T906 1256 aa13.8□□□□□ -0.2
TSKU-203ENST00000527881 TRIM68Q6AZZ1 485 aa13.8□□□□□ -0.2
TSKU-203ENST00000527881 PROCA1Q8NCQ7 364 aaPredicted RBP13.8□□□□□ -0.2
TSKU-203ENST00000527881 MAGOHBQ96A72 148 aaKnown RBP13.8□□□□□ -0.2
TSKU-203ENST00000527881 STK38LQ9Y2H1 464 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 262 ms