RNA–Protein interactions for RNA: ENST00000527720.5

USH1C-207, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,278 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-207ENST00000527720 ZNF543Q08ER8 600 aa17.25■□□□□ 0.35
USH1C-207ENST00000527720 FLAD1Q8NFF5 587 aa17.25■□□□□ 0.35
USH1C-207ENST00000527720 TEKT1Q969V4 418 aa17.25■□□□□ 0.35
USH1C-207ENST00000527720 EHD4Q9H223 541 aa17.25■□□□□ 0.35
USH1C-207ENST00000527720 CASQ1P31415 396 aa17.24■□□□□ 0.35
USH1C-207ENST00000527720 ELF2Q15723 593 aa17.24■□□□□ 0.35
USH1C-207ENST00000527720 COBLL1Q53SF7 1204 aa17.24■□□□□ 0.35
USH1C-207ENST00000527720 GPATCH4Q5T3I0 446 aaKnown RBP17.24■□□□□ 0.35
USH1C-207ENST00000527720 TMTC1Q8IUR5 882 aa17.24■□□□□ 0.35
USH1C-207ENST00000527720 CALML4Q96GE6 196 aa17.24■□□□□ 0.35
USH1C-207ENST00000527720 MASTLQ96GX5 879 aa17.24■□□□□ 0.35
USH1C-207ENST00000527720 MRIQ9BWK5 157 aa17.24■□□□□ 0.35
USH1C-207ENST00000527720 BIN2Q9UBW5 565 aaPredicted RBP17.24■□□□□ 0.35
USH1C-207ENST00000527720 PARP3Q9Y6F1 533 aa17.24■□□□□ 0.35
USH1C-207ENST00000527720 MYH7BA7E2Y1 1941 aa17.24■□□□□ 0.35
USH1C-207ENST00000527720 EP400Q96L91 3159 aa17.24■□□□□ 0.35
USH1C-207ENST00000527720 FRMPD2Q68DX3 1309 aaPredicted RBP17.24■□□□□ 0.35
USH1C-207ENST00000527720 PNMA6FA0A0J9YX94 578 aa17.24■□□□□ 0.35
USH1C-207ENST00000527720 SOWAHDA6NJG2 315 aa17.24■□□□□ 0.35
USH1C-207ENST00000527720 F8W031 263 aaPredicted RBP17.24■□□□□ 0.35
USH1C-207ENST00000527720 HOXA7P31268 230 aaPredicted RBP17.24■□□□□ 0.35
USH1C-207ENST00000527720 SHMT1P34896 483 aa17.24■□□□□ 0.35
USH1C-207ENST00000527720 FXR2P51116 673 aaKnown RBP eCLIP17.24■□□□□ 0.35
USH1C-207ENST00000527720 JAKMIP3Q5VZ66 844 aa17.24■□□□□ 0.35
USH1C-207ENST00000527720 LRRC47Q8N1G4 583 aaKnown RBP17.24■□□□□ 0.35
USH1C-207ENST00000527720 CCDC17Q96LX7 622 aa17.24■□□□□ 0.35
USH1C-207ENST00000527720 MTMR9Q96QG7 549 aa17.24■□□□□ 0.35
USH1C-207ENST00000527720 TRIM9Q9C026 710 aa17.24■□□□□ 0.35
USH1C-207ENST00000527720 VPS16Q9H269 839 aa17.24■□□□□ 0.35
USH1C-207ENST00000527720 ADGRG1Q9Y653 693 aa17.24■□□□□ 0.35
USH1C-207ENST00000527720 ZNF646O15015 1829 aaPredicted RBP17.24■□□□□ 0.35
USH1C-207ENST00000527720 SIPA1L1O43166 1804 aa17.24■□□□□ 0.35
USH1C-207ENST00000527720 A0A1W2PQC6 194 aa17.23■□□□□ 0.35
USH1C-207ENST00000527720 BICDL2A1A5D9 508 aa17.23■□□□□ 0.35
USH1C-207ENST00000527720 PLSCR1O15162 318 aa17.23■□□□□ 0.35
USH1C-207ENST00000527720 GNG11P61952 73 aa17.23■□□□□ 0.35
USH1C-207ENST00000527720 CDC42EP5Q6NZY7 148 aa17.23■□□□□ 0.35
USH1C-207ENST00000527720 PODNQ7Z5L7 613 aa17.23■□□□□ 0.35
USH1C-207ENST00000527720 IRF2BP1Q8IU81 584 aa17.23■□□□□ 0.35
USH1C-207ENST00000527720 CPLX3Q8WVH0 158 aa17.23■□□□□ 0.35
USH1C-207ENST00000527720 AKT1S1Q96B36 256 aa17.23■□□□□ 0.35
USH1C-207ENST00000527720 RAB34Q9BZG1 259 aa17.23■□□□□ 0.35
USH1C-207ENST00000527720 RIC8AQ9NPQ8 531 aa17.23■□□□□ 0.35
USH1C-207ENST00000527720 TAB2Q9NYJ8 693 aa17.23■□□□□ 0.35
USH1C-207ENST00000527720 STK17AQ9UEE5 414 aa17.23■□□□□ 0.35
USH1C-207ENST00000527720 FANCGO15287 622 aa17.23■□□□□ 0.35
USH1C-207ENST00000527720 URI1O94763 535 aaPredicted RBP17.23■□□□□ 0.35
USH1C-207ENST00000527720 TECP42680 631 aa17.23■□□□□ 0.35
USH1C-207ENST00000527720 FXR1P51114 621 aaKnown RBP eCLIP17.23■□□□□ 0.35
USH1C-207ENST00000527720 FKBP1AP62942 108 aaKnown RBP17.23■□□□□ 0.35
USH1C-207ENST00000527720 PDIA5Q14554 519 aa17.23■□□□□ 0.35
USH1C-207ENST00000527720 TMEM266Q2M3C6 531 aa17.23■□□□□ 0.35
USH1C-207ENST00000527720 RAD9BQ6WBX8 426 aa17.23■□□□□ 0.35
USH1C-207ENST00000527720 LRRC15Q8TF66 581 aa17.23■□□□□ 0.35
USH1C-207ENST00000527720 MAPK8IP1Q9UQF2 711 aa17.23■□□□□ 0.35
USH1C-207ENST00000527720 G3V3G9 751 aa17.22■□□□□ 0.35
USH1C-207ENST00000527720 COBLO75128 1261 aa17.22■□□□□ 0.35
USH1C-207ENST00000527720 CALCRLQ16602 461 aa17.22■□□□□ 0.35
USH1C-207ENST00000527720 DCAF8Q5TAQ9 597 aa17.22■□□□□ 0.35
USH1C-207ENST00000527720 APOBEC3HQ6NTF7 200 aaKnown RBP17.22■□□□□ 0.35
USH1C-207ENST00000527720 COL23A1Q86Y22 540 aaPredicted RBP17.22■□□□□ 0.35
USH1C-207ENST00000527720 POTEDQ86YR6 584 aa17.22■□□□□ 0.35
USH1C-207ENST00000527720 PLIN2Q99541 437 aa17.22■□□□□ 0.35
USH1C-207ENST00000527720 ARID3AQ99856 593 aa17.22■□□□□ 0.35
USH1C-207ENST00000527720 MMTAG2Q9BU76 263 aaKnown RBP17.22■□□□□ 0.35
USH1C-207ENST00000527720 JMJD4Q9H9V9 463 aa17.22■□□□□ 0.35
USH1C-207ENST00000527720 ABHD10Q9NUJ1 306 aa17.22■□□□□ 0.35
USH1C-207ENST00000527720 EXOC1Q9NV70 894 aa17.22■□□□□ 0.35
USH1C-207ENST00000527720 MAGEC2Q9UBF1 373 aaPredicted RBP17.22■□□□□ 0.35
USH1C-207ENST00000527720 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.22■□□□□ 0.35
USH1C-207ENST00000527720 V9GYY5 206 aaPredicted RBP17.22■□□□□ 0.35
USH1C-207ENST00000527720 LGALS16A8MUM7 142 aa17.22■□□□□ 0.35
USH1C-207ENST00000527720 CCNE1P24864 410 aa17.22■□□□□ 0.35
USH1C-207ENST00000527720 MAP3K9P80192 1104 aa17.22■□□□□ 0.35
USH1C-207ENST00000527720 UBXN1Q04323 297 aa17.22■□□□□ 0.35
USH1C-207ENST00000527720 MTF1Q14872 753 aa17.22■□□□□ 0.35
USH1C-207ENST00000527720 DOK7Q18PE1 504 aa17.22■□□□□ 0.35
USH1C-207ENST00000527720 TTI2Q6NXR4 508 aa17.22■□□□□ 0.35
USH1C-207ENST00000527720 MNS1Q8NEH6 495 aa17.22■□□□□ 0.35
USH1C-207ENST00000527720 COA7Q96BR5 231 aa17.22■□□□□ 0.35
USH1C-207ENST00000527720 TRIM47Q96LD4 638 aa17.22■□□□□ 0.35
USH1C-207ENST00000527720 DESI2Q9BSY9 194 aa17.22■□□□□ 0.35
USH1C-207ENST00000527720 TMEM260Q9NX78 707 aa17.22■□□□□ 0.35
USH1C-207ENST00000527720 OGFRQ9NZT2 677 aa17.22■□□□□ 0.35
USH1C-207ENST00000527720 ARFGEF1Q9Y6D6 1849 aa17.21■□□□□ 0.35
USH1C-207ENST00000527720 TRIM49BA6NDI0 452 aa17.21■□□□□ 0.35
USH1C-207ENST00000527720 EFCAB8A8MWE9 144 aa17.21■□□□□ 0.35
USH1C-207ENST00000527720 PPP4R3AQ6IN85 833 aa17.21■□□□□ 0.35
USH1C-207ENST00000527720 CNNM4Q6P4Q7 775 aa17.21■□□□□ 0.35
USH1C-207ENST00000527720 CYP26C1Q6V0L0 522 aa17.21■□□□□ 0.35
USH1C-207ENST00000527720 FAM114A1Q8IWE2 563 aa17.21■□□□□ 0.35
USH1C-207ENST00000527720 ADGRF4Q8IZF3 695 aa17.21■□□□□ 0.35
USH1C-207ENST00000527720 KIFC2Q96AC6 838 aa17.21■□□□□ 0.35
USH1C-207ENST00000527720 MTMR8Q96EF0 704 aa17.21■□□□□ 0.35
USH1C-207ENST00000527720 ZDHHC15Q96MV8 337 aa17.21■□□□□ 0.35
USH1C-207ENST00000527720 WDR24Q96S15 920 aa17.21■□□□□ 0.35
USH1C-207ENST00000527720 NUP88Q99567 741 aaPredicted RBP17.21■□□□□ 0.35
USH1C-207ENST00000527720 DHX36Q9H2U1 1008 aaKnown RBP17.21■□□□□ 0.35
USH1C-207ENST00000527720 CLK2P49760 499 aaKnown RBP17.21■□□□□ 0.34
USH1C-207ENST00000527720 SCNN1DP51172 638 aa17.21■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms