RNA–Protein interactions for RNA: ENST00000527586.1

VPS26B-204, Transcript of VPS26, retromer complex component B, humanhuman

TSL 3

Gene VPS26B, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-204ENST00000527586 GH2P01242 217 aa8.69□□□□□ -1.02
VPS26B-204ENST00000527586 IFIT1P09914 478 aaKnown RBP8.69□□□□□ -1.02
VPS26B-204ENST00000527586 SP100P23497 879 aaPredicted RBP8.69□□□□□ -1.02
VPS26B-204ENST00000527586 CNKSR3Q6P9H4 555 aa8.69□□□□□ -1.02
VPS26B-204ENST00000527586 UNQ6494/PRO21346Q6UXR6 183 aa8.69□□□□□ -1.02
VPS26B-204ENST00000527586 NOL8Q76FK4 1167 aaKnown RBP8.69□□□□□ -1.02
VPS26B-204ENST00000527586 FBXO11Q86XK2 927 aa8.69□□□□□ -1.02
VPS26B-204ENST00000527586 DZIP1Q86YF9 867 aaKnown RBP8.69□□□□□ -1.02
VPS26B-204ENST00000527586 SLF2Q8IX21 1173 aa8.69□□□□□ -1.02
VPS26B-204ENST00000527586 MB21D1Q8N884 522 aa8.69□□□□□ -1.02
VPS26B-204ENST00000527586 SP7Q8TDD2 431 aaPredicted RBP8.69□□□□□ -1.02
VPS26B-204ENST00000527586 FAM163AQ96GL9 167 aaPredicted RBP8.69□□□□□ -1.02
VPS26B-204ENST00000527586 TRIM34Q9BYJ4 488 aa8.69□□□□□ -1.02
VPS26B-204ENST00000527586 KIAA1683Q9H0B3 1180 aa8.69□□□□□ -1.02
VPS26B-204ENST00000527586 USP18Q9UMW8 372 aa8.69□□□□□ -1.02
VPS26B-204ENST00000527586 PTPRSQ13332 1948 aa8.68□□□□□ -1.02
VPS26B-204ENST00000527586 ABHD14A-ACY1A0A1B0GW23 586 aa8.68□□□□□ -1.02
VPS26B-204ENST00000527586 ATF7P17544 494 aaPredicted RBP8.68□□□□□ -1.02
VPS26B-204ENST00000527586 TMPOP42166 694 aaKnown RBP8.68□□□□□ -1.02
VPS26B-204ENST00000527586 FSCN1Q16658 493 aaKnown RBP8.68□□□□□ -1.02
VPS26B-204ENST00000527586 TCTN1Q2MV58 587 aa8.68□□□□□ -1.02
VPS26B-204ENST00000527586 LRRC24Q50LG9 513 aa8.68□□□□□ -1.02
VPS26B-204ENST00000527586 N4BP2L1Q5TBK1 243 aaPredicted RBP8.68□□□□□ -1.02
VPS26B-204ENST00000527586 VGLL2Q8N8G2 317 aa8.68□□□□□ -1.02
VPS26B-204ENST00000527586 ACER1Q8TDN7 264 aa8.68□□□□□ -1.02
VPS26B-204ENST00000527586 RTP3Q9BQQ7 232 aa8.68□□□□□ -1.02
VPS26B-204ENST00000527586 TANGO6Q9C0B7 1094 aa8.68□□□□□ -1.02
VPS26B-204ENST00000527586 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.68□□□□□ -1.02
VPS26B-204ENST00000527586 ASTN1O14525 1302 aa8.68□□□□□ -1.02
VPS26B-204ENST00000527586 SALL1Q9NSC2 1324 aa8.68□□□□□ -1.02
VPS26B-204ENST00000527586 MROH7-TTC4A0A0A0MT08 1334 aa8.67□□□□□ -1.02
VPS26B-204ENST00000527586 GPR75-ASB3A0A0A6YYF3 556 aa8.67□□□□□ -1.02
VPS26B-204ENST00000527586 SLC30A4O14863 429 aa8.67□□□□□ -1.02
VPS26B-204ENST00000527586 GRM6O15303 877 aa8.67□□□□□ -1.02
VPS26B-204ENST00000527586 SP9P0CG40 484 aa8.67□□□□□ -1.02
VPS26B-204ENST00000527586 NPR3P17342 541 aa8.67□□□□□ -1.02
VPS26B-204ENST00000527586 HTRA4P83105 476 aaPredicted RBP8.67□□□□□ -1.02
VPS26B-204ENST00000527586 BFSP2Q13515 415 aa8.67□□□□□ -1.02
VPS26B-204ENST00000527586 GPNMBQ14956 572 aa8.67□□□□□ -1.02
VPS26B-204ENST00000527586 CCDC30Q5VVM6 783 aa8.67□□□□□ -1.02
VPS26B-204ENST00000527586 MAMDC4Q6UXC1 1216 aa8.67□□□□□ -1.02
VPS26B-204ENST00000527586 NBEAQ8NFP9 2946 aa8.67□□□□□ -1.02
VPS26B-204ENST00000527586 LMAN2LQ9H0V9 348 aa8.67□□□□□ -1.02
VPS26B-204ENST00000527586 ABHD16BQ9H3Z7 469 aa8.67□□□□□ -1.02
VPS26B-204ENST00000527586 BARX2Q9UMQ3 279 aaPredicted RBP8.67□□□□□ -1.02
VPS26B-204ENST00000527586 TET1Q8NFU7 2136 aa8.66□□□□□ -1.02
VPS26B-204ENST00000527586 RALGAPA2Q2PPJ7 1873 aa8.66□□□□□ -1.02
VPS26B-204ENST00000527586 DSPP15924 2871 aaKnown RBP8.66□□□□□ -1.02
VPS26B-204ENST00000527586 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.66□□□□□ -1.02
VPS26B-204ENST00000527586 KINO60870 393 aaKnown RBP8.66□□□□□ -1.02
VPS26B-204ENST00000527586 EFCAB14O75071 495 aa8.66□□□□□ -1.02
VPS26B-204ENST00000527586 SMPD1P17405 629 aa8.66□□□□□ -1.02
VPS26B-204ENST00000527586 FGFR2P21802 821 aa8.66□□□□□ -1.02
VPS26B-204ENST00000527586 RBM25P49756 843 aaKnown RBP8.66□□□□□ -1.02
VPS26B-204ENST00000527586 TNFAIP2Q03169 654 aa8.66□□□□□ -1.02
VPS26B-204ENST00000527586 TMEM132BQ14DG7 1078 aa8.66□□□□□ -1.02
VPS26B-204ENST00000527586 RAB3GAP1Q15042 981 aa8.66□□□□□ -1.02
VPS26B-204ENST00000527586 PUM3Q15397 648 aaKnown RBP8.66□□□□□ -1.02
VPS26B-204ENST00000527586 NEUROD2Q15784 382 aa8.66□□□□□ -1.02
VPS26B-204ENST00000527586 LRRFIP1Q32MZ4 808 aaKnown RBP8.66□□□□□ -1.02
VPS26B-204ENST00000527586 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.66□□□□□ -1.02
VPS26B-204ENST00000527586 TLK2Q86UE8 772 aa8.66□□□□□ -1.02
VPS26B-204ENST00000527586 FOXP4Q8IVH2 680 aaPredicted RBP8.66□□□□□ -1.02
VPS26B-204ENST00000527586 EFHBQ8N7U6 833 aa8.66□□□□□ -1.02
VPS26B-204ENST00000527586 LINS1Q8NG48 757 aa8.66□□□□□ -1.02
VPS26B-204ENST00000527586 SUSD6Q92537 303 aa8.66□□□□□ -1.02
VPS26B-204ENST00000527586 SECISBP2LQ93073 1101 aaKnown RBP8.66□□□□□ -1.02
VPS26B-204ENST00000527586 ATG4CQ96DT6 458 aa8.66□□□□□ -1.02
VPS26B-204ENST00000527586 KIF12Q96FN5 646 aa8.66□□□□□ -1.02
VPS26B-204ENST00000527586 AP5M1Q9H0R1 490 aa8.66□□□□□ -1.02
VPS26B-204ENST00000527586 DHX36Q9H2U1 1008 aaKnown RBP8.66□□□□□ -1.02
VPS26B-204ENST00000527586 MYO18BQ8IUG5 2567 aa8.65□□□□□ -1.02
VPS26B-204ENST00000527586 RBAK-RBAKDNI3L0D1 243 aa8.65□□□□□ -1.02
VPS26B-204ENST00000527586 DYNC1LI2O43237 492 aaPredicted RBP8.65□□□□□ -1.02
VPS26B-204ENST00000527586 PTGS1P23219 599 aa8.65□□□□□ -1.02
VPS26B-204ENST00000527586 CTNNB1P35222 781 aa8.65□□□□□ -1.02
VPS26B-204ENST00000527586 IKBKEQ14164 716 aa8.65□□□□□ -1.02
VPS26B-204ENST00000527586 FAM47CQ5HY64 1035 aa8.65□□□□□ -1.02
VPS26B-204ENST00000527586 METTL16Q86W50 562 aaKnown RBP8.65□□□□□ -1.02
VPS26B-204ENST00000527586 MYOCDQ8IZQ8 938 aa8.65□□□□□ -1.02
VPS26B-204ENST00000527586 ADAM32Q8TC27 787 aa8.65□□□□□ -1.02
VPS26B-204ENST00000527586 NETO1Q8TDF5 533 aa8.65□□□□□ -1.02
VPS26B-204ENST00000527586 YME1L1Q96TA2 773 aa8.65□□□□□ -1.02
VPS26B-204ENST00000527586 TSHZ2Q9NRE2 1034 aa8.65□□□□□ -1.02
VPS26B-204ENST00000527586 COL11A1P12107 1806 aaPredicted RBP8.65□□□□□ -1.02
VPS26B-204ENST00000527586 ZNF462Q96JM2 2506 aa8.64□□□□□ -1.03
VPS26B-204ENST00000527586 MAP4K4O95819 1239 aaPredicted RBP8.64□□□□□ -1.03
VPS26B-204ENST00000527586 GLP2RO95838 553 aa8.64□□□□□ -1.03
VPS26B-204ENST00000527586 TGM1P22735 817 aa8.64□□□□□ -1.03
VPS26B-204ENST00000527586 G2E3Q7L622 706 aa8.64□□□□□ -1.03
VPS26B-204ENST00000527586 TEX11Q8IYF3 940 aa8.64□□□□□ -1.03
VPS26B-204ENST00000527586 PPP1R13LQ8WUF5 828 aa8.64□□□□□ -1.03
VPS26B-204ENST00000527586 PPP2R3CQ969Q6 453 aa8.64□□□□□ -1.03
VPS26B-204ENST00000527586 GNL3LQ9NVN8 582 aaKnown RBP8.64□□□□□ -1.03
VPS26B-204ENST00000527586 ABCF2Q9UG63 623 aa8.64□□□□□ -1.03
VPS26B-204ENST00000527586 DENND2AQ9ULE3 1009 aa8.64□□□□□ -1.03
VPS26B-204ENST00000527586 GNEQ9Y223 722 aaKnown RBP8.64□□□□□ -1.03
VPS26B-204ENST00000527586 HECTD1Q9ULT8 2610 aa8.64□□□□□ -1.03
VPS26B-204ENST00000527586 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.63□□□□□ -1.03
VPS26B-204ENST00000527586 EIF4E1BA6NMX2 242 aaKnown RBP8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms