RNA–Protein interactions for RNA: ENST00000527467.5

CTNND1-216, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-216ENST00000527467 KRT12Q99456 494 aa7.92□□□□□ -1.14
CTNND1-216ENST00000527467 TRIM56Q9BRZ2 755 aaKnown RBP7.92□□□□□ -1.14
CTNND1-216ENST00000527467 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.92□□□□□ -1.14
CTNND1-216ENST00000527467 RIC8AQ9NPQ8 531 aa7.92□□□□□ -1.14
CTNND1-216ENST00000527467 NOP53Q9NZM5 478 aaKnown RBP7.92□□□□□ -1.14
CTNND1-216ENST00000527467 PIK3C2BO00750 1634 aa7.92□□□□□ -1.14
CTNND1-216ENST00000527467 MAP3K19Q56UN5 1328 aa7.92□□□□□ -1.14
CTNND1-216ENST00000527467 PYGBP11216 843 aa7.92□□□□□ -1.14
CTNND1-216ENST00000527467 PLCG2P16885 1265 aa7.92□□□□□ -1.14
CTNND1-216ENST00000527467 ATP1A2P50993 1020 aa7.92□□□□□ -1.14
CTNND1-216ENST00000527467 IFT88Q13099 833 aa7.92□□□□□ -1.14
CTNND1-216ENST00000527467 RPS6KA1Q15418 735 aa7.92□□□□□ -1.14
CTNND1-216ENST00000527467 OR9Q1Q8NGQ5 310 aa7.92□□□□□ -1.14
CTNND1-216ENST00000527467 RRP36Q96EU6 259 aaKnown RBP7.92□□□□□ -1.14
CTNND1-216ENST00000527467 NR1H4Q96RI1 486 aaPredicted RBP7.92□□□□□ -1.14
CTNND1-216ENST00000527467 AS3MTQ9HBK9 375 aa7.92□□□□□ -1.14
CTNND1-216ENST00000527467 C6orf50Q9HD87 102 aa7.92□□□□□ -1.14
CTNND1-216ENST00000527467 ZNF229Q9UJW7 825 aa7.92□□□□□ -1.14
CTNND1-216ENST00000527467 ERBB3P21860 1342 aa7.92□□□□□ -1.14
CTNND1-216ENST00000527467 MYO3BQ8WXR4 1341 aa7.92□□□□□ -1.14
CTNND1-216ENST00000527467 GCC2Q8IWJ2 1684 aa7.92□□□□□ -1.14
CTNND1-216ENST00000527467 TULP4Q9NRJ4 1543 aa7.92□□□□□ -1.14
CTNND1-216ENST00000527467 SPTLC2O15270 562 aa7.92□□□□□ -1.14
CTNND1-216ENST00000527467 DKC1O60832 514 aaKnown RBP eCLIP7.92□□□□□ -1.14
CTNND1-216ENST00000527467 KRT5P13647 590 aa7.92□□□□□ -1.14
CTNND1-216ENST00000527467 MMP14P50281 582 aa7.92□□□□□ -1.14
CTNND1-216ENST00000527467 ANGPT1Q15389 498 aa7.92□□□□□ -1.14
CTNND1-216ENST00000527467 TRMT10CQ7L0Y3 403 aaKnown RBP7.92□□□□□ -1.14
CTNND1-216ENST00000527467 NLRP9Q7RTR0 991 aa7.92□□□□□ -1.14
CTNND1-216ENST00000527467 TEX11Q8IYF3 940 aa7.92□□□□□ -1.14
CTNND1-216ENST00000527467 NFATC2IPQ8NCF5 419 aa7.92□□□□□ -1.14
CTNND1-216ENST00000527467 FAM212AQ96EL1 285 aa7.92□□□□□ -1.14
CTNND1-216ENST00000527467 GINS4Q9BRT9 223 aa7.92□□□□□ -1.14
CTNND1-216ENST00000527467 ALG1Q9BT22 464 aa7.92□□□□□ -1.14
CTNND1-216ENST00000527467 UTP6Q9NYH9 597 aaKnown RBP7.92□□□□□ -1.14
CTNND1-216ENST00000527467 SUCLA2Q9P2R7 463 aaPredicted RBP7.92□□□□□ -1.14
CTNND1-216ENST00000527467 SNX5Q9Y5X3 404 aa7.92□□□□□ -1.14
CTNND1-216ENST00000527467 EMILIN1Q9Y6C2 1016 aa7.92□□□□□ -1.14
CTNND1-216ENST00000527467 TRIM75PA6NK02 468 aa7.91□□□□□ -1.14
CTNND1-216ENST00000527467 GSTA4O15217 222 aa7.91□□□□□ -1.14
CTNND1-216ENST00000527467 TOMM70O94826 608 aa7.91□□□□□ -1.14
CTNND1-216ENST00000527467 DMTNQ08495 405 aa7.91□□□□□ -1.14
CTNND1-216ENST00000527467 ASIC2Q16515 512 aa7.91□□□□□ -1.14
CTNND1-216ENST00000527467 MCF2L2Q86YR7 1114 aa7.91□□□□□ -1.14
CTNND1-216ENST00000527467 TMTC1Q8IUR5 882 aa7.91□□□□□ -1.14
CTNND1-216ENST00000527467 ZC3H15Q8WU90 426 aaKnown RBP7.91□□□□□ -1.14
CTNND1-216ENST00000527467 ZBTB3Q9H5J0 574 aa7.91□□□□□ -1.14
CTNND1-216ENST00000527467 CNGB3Q9NQW8 809 aa7.91□□□□□ -1.14
CTNND1-216ENST00000527467 SESN1Q9Y6P5 492 aa7.91□□□□□ -1.14
CTNND1-216ENST00000527467 TSPY2A6NKD2 308 aa7.91□□□□□ -1.14
CTNND1-216ENST00000527467 PPEF1O14829 653 aaPredicted RBP7.91□□□□□ -1.14
CTNND1-216ENST00000527467 KRT9P35527 623 aa7.91□□□□□ -1.14
CTNND1-216ENST00000527467 TBC1D8BQ0IIM8 1120 aa7.91□□□□□ -1.14
CTNND1-216ENST00000527467 TMEM259Q4ZIN3 620 aa7.91□□□□□ -1.14
CTNND1-216ENST00000527467 POMGNT1Q8WZA1 660 aa7.91□□□□□ -1.14
CTNND1-216ENST00000527467 SLC10A4Q96EP9 437 aa7.91□□□□□ -1.14
CTNND1-216ENST00000527467 NUP58Q9BVL2 599 aa7.91□□□□□ -1.14
CTNND1-216ENST00000527467 LZTS1Q9Y250 596 aa7.91□□□□□ -1.14
CTNND1-216ENST00000527467 CCDC169A6NNP5 214 aa7.91□□□□□ -1.14
CTNND1-216ENST00000527467 SYCE1LA8MT33 242 aa7.91□□□□□ -1.14
CTNND1-216ENST00000527467 PRR23D1E9PI22 279 aaPredicted RBP7.91□□□□□ -1.14
CTNND1-216ENST00000527467 DEAF1O75398 565 aaPredicted RBP7.91□□□□□ -1.14
CTNND1-216ENST00000527467 PRR23D2P0DMB1 279 aaPredicted RBP7.91□□□□□ -1.14
CTNND1-216ENST00000527467 IL9RQ01113 521 aa7.91□□□□□ -1.14
CTNND1-216ENST00000527467 RCN2Q14257 317 aa7.91□□□□□ -1.14
CTNND1-216ENST00000527467 MFSD6Q6ZSS7 791 aa7.91□□□□□ -1.14
CTNND1-216ENST00000527467 TUBGCP3Q96CW5 907 aa7.91□□□□□ -1.14
CTNND1-216ENST00000527467 CHMP6Q96FZ7 201 aa7.91□□□□□ -1.14
CTNND1-216ENST00000527467 OLFM3Q96PB7 478 aa7.91□□□□□ -1.14
CTNND1-216ENST00000527467 NOC4LQ9BVI4 516 aaKnown RBP7.91□□□□□ -1.14
CTNND1-216ENST00000527467 CDV3Q9UKY7 258 aaKnown RBP7.91□□□□□ -1.14
CTNND1-216ENST00000527467 ATP11BQ9Y2G3 1177 aa7.91□□□□□ -1.14
CTNND1-216ENST00000527467 SH3TC1Q8TE82 1336 aa7.91□□□□□ -1.14
CTNND1-216ENST00000527467 RNMTO43148 476 aaKnown RBP7.91□□□□□ -1.14
CTNND1-216ENST00000527467 UFL1O94874 794 aa7.91□□□□□ -1.14
CTNND1-216ENST00000527467 EPB41P11171 864 aaKnown RBP7.91□□□□□ -1.14
CTNND1-216ENST00000527467 ATP2B4P23634 1241 aa7.91□□□□□ -1.14
CTNND1-216ENST00000527467 RAB14P61106 215 aa7.91□□□□□ -1.14
CTNND1-216ENST00000527467 IRX1P78414 480 aaPredicted RBP7.91□□□□□ -1.14
CTNND1-216ENST00000527467 DCAF17Q5H9S7 520 aaPredicted RBP7.91□□□□□ -1.14
CTNND1-216ENST00000527467 SCYL1Q96KG9 808 aa7.91□□□□□ -1.14
CTNND1-216ENST00000527467 LARP6Q9BRS8 491 aaKnown RBP7.91□□□□□ -1.14
CTNND1-216ENST00000527467 SYT17Q9BSW7 474 aa7.91□□□□□ -1.14
CTNND1-216ENST00000527467 CDC42BPBQ9Y5S2 1711 aa7.9□□□□□ -1.14
CTNND1-216ENST00000527467 hCG_2014768A0A024R1R8 64 aa7.9□□□□□ -1.14
CTNND1-216ENST00000527467 PFDN6O15212 129 aa7.9□□□□□ -1.14
CTNND1-216ENST00000527467 IL6STP40189 918 aaPredicted RBP7.9□□□□□ -1.14
CTNND1-216ENST00000527467 CRKLP46109 303 aaKnown RBP7.9□□□□□ -1.14
CTNND1-216ENST00000527467 GNAQP50148 359 aa7.9□□□□□ -1.14
CTNND1-216ENST00000527467 USPL1Q5W0Q7 1092 aa7.9□□□□□ -1.14
CTNND1-216ENST00000527467 ATG16L1Q676U5 607 aa7.9□□□□□ -1.14
CTNND1-216ENST00000527467 CHADLQ6NUI6 762 aa7.9□□□□□ -1.14
CTNND1-216ENST00000527467 MMS22LQ6ZRQ5 1243 aa7.9□□□□□ -1.14
CTNND1-216ENST00000527467 TMTC2Q8N394 836 aa7.9□□□□□ -1.14
CTNND1-216ENST00000527467 SERPINI1Q99574 410 aa7.9□□□□□ -1.14
CTNND1-216ENST00000527467 SLC52A2Q9HAB3 445 aa7.9□□□□□ -1.14
CTNND1-216ENST00000527467 DCDC2Q9UHG0 476 aa7.9□□□□□ -1.14
CTNND1-216ENST00000527467 ELP1O95163 1332 aa7.9□□□□□ -1.14
CTNND1-216ENST00000527467 TMEM191CA6NGB0 347 aa7.9□□□□□ -1.14
CTNND1-216ENST00000527467 F13A1P00488 732 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms